version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3095 64.02 0 3532274..3533179 - 301 26989840 - PP_3121 - LysR family transcriptional regulator 3096 60.94 0 3533320..3534018 + 232 26989841 - PP_3122 - 3-oxoacid CoA-transferase subunit A 3097 61.04 0 3534054..3534710 + 218 26989842 - PP_3123 - 3-oxoacid CoA-transferase subunit B 3098 63.71 0 3534865..3536283 + 472 26989843 - PP_3124 - short-chain fatty acid transporter family protein 3099 61.14 0 3536360..3536902 + 180 26989844 - PP_3125 - Cro/CI family transcriptional regulator 3100 58.60 0 3537594..3538151 + 185 26989845 - PP_3126 - polysaccharide export protein 3101 61.53 0 3539311..3540849 + 512 26989846 - PP_3127 - lipopolysaccharide biosynthesis protein 3102 59.48 0 3540885..3541691 + 268 26989847 - PP_3128 - protein-tyrosine kinase 3103 62.53 0 3541754..3542719 - 321 26989848 galE PP_3129 - UDP-glucose 4-epimerase 3104 62.87 0 3542825..3545431 - 868 26989849 - PP_3130 - hypothetical protein 3105 63.06 0 3545431..3546957 - 508 26989850 - PP_3131 - hypothetical protein 3106 61.80 0 3547053..3548429 + 458 26989851 - PP_3132 - polysaccharide biosynthesis protein 3107 60.26 0 3548666..3550132 + 488 26989852 - PP_3133 - GMC oxidoreductase 3108 57.76 -1 3550149..3550844 + 231 26989853 - PP_3134 - transferase hexapeptide repeat containing protein 3109 62.07 0 3550846..3551802 + 318 26989854 - PP_3135 - glycosyl transferase, putative 3110 61.33 0 3551811..3552335 + 174 26989855 - PP_3136 - serine O-acetyltransferase, putative 3111 65.44 0 3552341..3553318 + 325 26989856 - PP_3137 - glycosyl transferase, group 2 family protein 3112 60.88 0 3553331..3554332 + 333 26989857 - PP_3138 - VirK domain-containing protein 3113 64.34 0 3554382..3555584 + 400 26989858 - PP_3139 - glycosyl transferase, group 1 family protein 3114 64.56 0 3555581..3556768 + 395 26989859 - PP_3140 - glycosyl transferase, group 2 family protein 3115 64.81 0 3556768..3557520 + 250 26989860 - PP_3141 - WecB/TagA/CpsF family glycosyl transferase 3116 55.77 -1 3557699..3559120 + 473 26989861 - PP_3142 - sugar transferase, putative 3117 65.07 0 3559155..3560096 - 313 26989862 - PP_3143 - LysR family transcriptional regulator 3118 63.62 0 3560243..3561619 + 458 26989863 sda-3 PP_3144 - L-serine dehydratase, iron-sulfur-dependent, single chain form 3119 61.92 0 3561707..3562528 - 273 26989864 - PP_3145 - hypothetical protein 3120 66.36 +1 3562525..3563820 - 431 26989865 - PP_3146 - oxidoreductase, putative 3121 61.52 0 3563834..3564922 - 362 26989866 - PP_3147 - periplasmic polyamine-binding protein, putative 3122 62.55 0 3565003..3566361 - 452 26989867 - PP_3148 - glutamine synthetase, putative 3123 62.67 0 3566395..3567444 + 349 26989868 - PP_3149 - AraC family transcriptional regulator 3124 63.61 0 3567441..3569438 + 665 26989869 - PP_3150 - hypothetical protein 3125 65.44 0 3569476..3570861 - 461 26989870 - PP_3151 - aldehyde dehydrogenase family protein 3126 63.55 0 3570969..3571835 + 288 26989871 - PP_3152 - LysR family transcriptional regulator 3127 63.06 0 3571962..3572405 + 147 26989872 - PP_3153 - hypothetical protein 3128 56.50 -1 3572512..3573180 + 222 26989873 - PP_3154 - hypothetical protein 3129 62.16 0 3573212..3575341 - 709 26989874 - PP_3155 - outer membrane ferric siderophore receptor, putative 3130 64.42 0 3575596..3576486 - 296 26989875 - PP_3156 - universal stress protein 3131 64.52 0 3576612..3577403 + 263 26989876 - PP_3157 - inositol monophosphatase family protein 3132 61.11 0 3577583..3578320 + 245 26989877 - PP_3158 - hypothetical protein 3133 59.35 0 3579863..3580819 + 318 26989878 benR PP_3159 - AraC family transcriptional regulator 3134 52.87 -2 3580902..3581843 + 313 26989879 - PP_3160 - hypothetical protein 3135 61.74 0 3581927..3583285 + 452 26989880 benA PP_3161 - benzoate dioxygenase, alpha subunit 3136 60.70 0 3583282..3583767 + 161 26989881 benB PP_3162 - benzoate dioxygenase, beta subunit 3137 62.81 0 3583840..3584850 + 336 26989882 benC PP_3163 - oxidoreductase FAD/NAD(P)-binding domain protein 3138 67.19 +1 3584985..3585746 + 253 26989883 benD PP_3164 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 3139 62.83 0 3585804..3587132 + 442 26989884 benK PP_3165 - major facilitator transporter 3140 65.46 0 3587162..3588076 + 304 26989885 - PP_3166 - catechol 1,2-dioxygenase 3141 66.75 +1 3588151..3589422 + 423 26989886 benE-2 PP_3167 - benzoate transporter 3142 60.19 0 3589477..3590727 + 416 26989887 benF PP_3168 - benzoate-specific porin 3143 62.22 0 3590802..3591881 + 359 26989888 - PP_3169 - membrane-bound metal-dependent hydrolase 3144 65.24 0 3591950..3592861 + 303 26989889 - PP_3170 - LysR family transcriptional regulator 3145 65.14 0 3592962..3593942 + 326 26989890 - PP_3171 - luciferase family protein 3146 60.13 0 3594018..3595439 - 473 26989891 - PP_3172 - group II intron-encoding maturase 3147 64.66 0 3595905..3597002 - 365 26989892 nemA PP_3173 - N-ethylmaleimide reductase 3148 63.50 0 3597098..3598108 - 336 26989893 - PP_3174 - aldo/keto reductase 3149 64.96 0 3598181..3599701 - 506 26989894 - PP_3175 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3150 63.72 0 3599867..3601189 - 440 26989895 - PP_3176 - major facilitator family transporter 3151 64.36 0 3601281..3602450 + 389 26989896 - PP_3177 - CdaR transcriptional regulator 3152 66.67 +1 3602592..3603731 + 379 26989897 - PP_3178 - glycerate kinase 3153 63.33 0 3603751..3604650 - 299 26989898 - PP_3179 - LysR family transcriptional regulator 3154 63.11 0 3604778..3605818 + 346 26989899 - PP_3180 - SMP-30/gluconolaconase/LRE domain protein 3155 65.62 0 3605808..3606758 - 316 26989900 - PP_3181 - phage integrase family site specific recombinase 3156 63.22 0 3606849..3609113 - 754 26989901 - PP_3182 - GGDEF domain-containing protein 3157 61.18 0 3609246..3610229 - 327 26989902 - PP_3183 - electron transport protein SCO1/SenC 3158 62.72 0 3610285..3613680 - 1131 26989903 - PP_3184 - hypothetical protein 3159 64.04 0 3614125..3614772 + 215 26989904 pet18 PP_3185 - transcriptional activator, TenA family 3160 64.70 0 3614775..3615434 + 219 26989905 - PP_3186 - transcriptional activator, TenA family 3161 64.06 0 3615663..3616928 + 421 26989906 codB PP_3187 - cytosine permease 3162 64.96 0 3616973..3618142 + 389 26989907 - PP_3188 - hypothetical protein 3163 62.16 0 3618147..3619388 + 413 26989908 codA PP_3189 - N-isopropylammelide isopropylaminohydrolase 3164 64.56 0 3619402..3620349 - 315 26989909 - PP_3190 - ornithine cyclodeaminase 3165 62.39 0 3620346..3621398 - 350 26989910 - PP_3191 - hypothetical protein 3166 56.27 -1 3621429..3622034 - 201 26989911 - PP_3192 - hypothetical protein 3167 68.41 +1 3622260..3622718 - 152 26989912 - PP_3193 - hypothetical protein 3168 65.40 0 3622706..3624049 - 447 26989913 - PP_3194 - hypothetical protein 3169 63.18 0 3624222..3625484 - 420 26989914 - PP_3195 - hypothetical protein 3170 61.02 0 3625561..3626499 - 312 26989915 - PP_3196 - nodulation protein d1 3171 66.03 +1 3626776..3627717 + 313 26989916 - PP_3197 - glyoxalase family protein 3172 66.08 +1 3627730..3628068 + 112 26989917 - PP_3198 - ferredoxin, 2Fe-2S 3173 63.82 0 3628208..3629332 + 374 26989918 - PP_3199 - hypothetical protein 3174 62.00 0 3629377..3631089 + 570 26989919 - PP_3200 - hypothetical protein 3175 70.15 +2 3632526..3633587 + 353 26989920 - PP_3201 - BNR domain-containing protein 3176 65.78 0 3633600..3636080 + 826 26989921 - PP_3202 - transporter, putative 3177 66.75 +1 3636070..3637260 + 396 26989922 - PP_3203 - major facilitator family transporter 3178 62.76 0 3637418..3638005 + 195 26989923 - PP_3204 - hypothetical protein 3179 67.27 +1 3638002..3638994 + 330 26989924 - PP_3205 - fumarylacetoacetate hydrolase family protein 3180 66.46 +1 3638985..3639971 + 328 26989925 - PP_3206 - hypothetical protein 3181 62.07 0 3639968..3640750 + 260 26989926 - PP_3207 - cyclase, putative 3182 64.55 0 3640830..3641774 - 314 26989927 - PP_3208 - Pdr/VanB family oxidoreductase 3183 66.32 +1 3641771..3643201 - 476 26989928 - PP_3209 - amidohydrolase 3184 64.18 0 3643240..3644043 - 267 26989929 - PP_3210 - ABC transporter, permease protein 3185 64.19 0 3644054..3644902 - 282 26989930 - PP_3211 - ABC transporter, ATP-binding protein 3186 60.33 0 3644968..3645993 - 341 26989931 - PP_3212 - Rieske 2Fe-2S family protein 3187 60.35 0 3646032..3647060 - 342 26989932 - PP_3213 - ABC transporter, periplasmic binding component-related protein 3188 55.89 -1 3647714..3648520 + 268 26989933 - PP_3214 - hypothetical protein 3189 63.88 0 3650211..3650819 - 202 26989934 - PP_3216 - hypothetical protein 3190 64.96 0 3651116..3652054 + 312 26989935 - PP_3217 - periplasmic aliphatic sulfonate-binding protein, putative 3191 63.64 0 3652112..3653431 + 439 26989936 - PP_3218 - NtaA/SnaA/SoxA family monooxygenase 3192 65.76 0 3653529..3654629 - 366 26989937 - PP_3219 - alkansulfonate monooxygenase, putative 3193 67.16 +1 3654770..3656389 - 539 26989938 - PP_3220 - ABC transporter, ATP-binding protein 3194 70.08 +2 3656386..3657294 - 302 26989939 - PP_3221 - ABC transporter, permease protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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