version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3048 63.51 0 3457296..3458687 - 463 26989793 - PP_3074 - citrate transporter 3049 65.49 0 3458913..3460358 - 481 26989794 - PP_3075 - sigma-54 dependent transcriptional regulator 3050 63.03 0 3460355..3461371 - 338 26989795 - PP_3076 - binding-protein-dependent transport systems inner membrane component 3051 63.74 0 3461371..3462429 - 352 26989796 - PP_3077 - binding-protein-dependent transport systems inner membrane component 3052 64.49 0 3462426..3464354 - 642 26989797 - PP_3078 - ABC transporter, periplasmic binding protein, putative 3053 62.41 0 3464368..3464649 - 93 26989798 ppiC-2 PP_3079 - PpiC-type peptidyl-prolyl cis-trans isomerase 3054 65.25 0 3464730..3465791 - 353 26989799 aroF-2 PP_3080 - phospho-2-dehydro-3-deoxyheptonate aldolase 3055 66.88 +1 3466346..3466822 - 158 26989800 - PP_3081 - PEBP family protein 3056 65.79 0 3467336..3468700 - 454 26989801 - PP_3082 - major facilitator superfamily MFS_1 3057 63.70 0 3469061..3469936 + 291 26989802 - PP_3083 - auxin efflux carrier 3058 63.74 0 3470069..3472528 - 819 26989803 - PP_3084 - TonB-dependent siderophore receptor 3059 67.60 +1 3472636..3473601 - 321 26989804 - PP_3085 - transmembrane sensor, putative 3060 63.51 0 3473598..3474104 - 168 26989805 - PP_3086 - RNA polymerase sigma-70 factor, putative 3061 65.55 0 3474193..3476709 - 838 26989806 - PP_3087 - excinuclease ABC subunit A 3062 61.33 0 3476877..3477962 - 361 26989807 - PP_3088 - hypothetical protein 3063 58.01 0 3478058..3478600 - 180 26989808 - PP_3089 - hypothetical protein 3064 63.94 0 3478720..3481215 - 831 26989809 - PP_3090 - OmpA domain-containing protein 3065 65.43 0 3482117..3485920 - 1267 26989810 - PP_3091 - hypothetical protein 3066 62.62 0 3485951..3486667 - 238 26989811 - PP_3092 - hypothetical protein 3067 63.32 0 3486664..3488007 - 447 26989812 - PP_3093 - hypothetical protein 3068 64.73 0 3488004..3488726 - 240 26989813 - PP_3094 - hypothetical protein 3069 65.87 +1 3488751..3491387 - 878 26989814 - PP_3095 - chaperone-associated ATPase, putative 3070 64.80 0 3491345..3492415 - 356 26989815 - PP_3096 - hypothetical protein 3071 61.67 0 3492379..3494199 - 606 26989816 - PP_3097 - hypothetical protein 3072 64.18 0 3494199..3494681 - 160 26989817 - PP_3098 - hypothetical protein 3073 63.14 0 3494708..3496210 - 500 26989818 - PP_3099 - hypothetical protein 3074 59.38 0 3496225..3496800 - 191 26989819 - PP_3100 - hypothetical protein 3075 61.30 0 3498998..3499780 + 260 26989820 - PP_3101 - ADP-ribosylglycohydrolase family protein 3076 51.18 -2 3504272..3504568 - 98 26989821 - PP_3102 - hypothetical protein 3077 59.44 0 3504565..3505740 - 391 26989822 - PP_3103 - hypothetical protein 3078 56.15 -1 3506632..3507648 + 338 26989823 - PP_3104 - hypothetical protein 3079 51.01 -2 3507649..3508344 + 231 26989824 - PP_3105 - hypothetical protein 3080 56.70 -1 3508370..3510226 + 618 26989825 - PP_3106 - hypothetical protein 3081 61.69 0 3510802..3511323 + 173 26989826 - PP_3107 - hypothetical protein 3082 60.97 0 3511330..3515487 + 1385 26989827 - PP_3108 - rhs-related protein 3083 52.55 -2 3517881..3518312 + 143 26989828 - PP_3109 - hypothetical protein 3084 55.40 -1 3521804..3522016 + 70 26989829 - PP_3110 - hypothetical protein 3085 64.76 0 3522156..3522260 + 34 26989830 - PP_3111 - hypothetical protein 3086 66.67 +1 3522417..3522845 - 142 26989831 - PP_3112 - hypothetical protein 3087 55.56 -1 3522907..3523266 + 119 26989832 - PP_3113 - ISPpu13, transposase Orf1 3088 58.97 0 3523285..3524817 + 510 26989833 - PP_3114 - ISPpu13, transposase Orf2 3089 53.33 -2 3524832..3525146 + 104 26989834 - PP_3115 - ISPpu13, transposase Orf3 3090 65.19 0 3525552..3526160 + 202 26989835 lexA-2 PP_3116 - LexA repressor 3091 70.53 +2 3526160..3526780 + 206 26989836 - PP_3117 - hypothetical protein 3092 67.37 +1 3526787..3528205 + 472 26989837 - PP_3118 - hypothetical protein 3093 65.66 0 3528202..3531282 + 1026 161378129 dnaE2 PP_3119 - error-prone DNA polymerase 3094 66.14 +1 3531465..3532226 - 253 26989839 - PP_3120 - aldo/keto reductase family oxidoreductase 3095 64.02 0 3532274..3533179 - 301 26989840 - PP_3121 - LysR family transcriptional regulator 3096 60.94 0 3533320..3534018 + 232 26989841 - PP_3122 - 3-oxoacid CoA-transferase subunit A 3097 61.04 0 3534054..3534710 + 218 26989842 - PP_3123 - 3-oxoacid CoA-transferase subunit B 3098 63.71 0 3534865..3536283 + 472 26989843 - PP_3124 - short-chain fatty acid transporter family protein 3099 61.14 0 3536360..3536902 + 180 26989844 - PP_3125 - Cro/CI family transcriptional regulator 3100 58.60 0 3537594..3538151 + 185 26989845 - PP_3126 - polysaccharide export protein 3101 61.53 0 3539311..3540849 + 512 26989846 - PP_3127 - lipopolysaccharide biosynthesis protein 3102 59.48 0 3540885..3541691 + 268 26989847 - PP_3128 - protein-tyrosine kinase 3103 62.53 0 3541754..3542719 - 321 26989848 galE PP_3129 - UDP-glucose 4-epimerase 3104 62.87 0 3542825..3545431 - 868 26989849 - PP_3130 - hypothetical protein 3105 63.06 0 3545431..3546957 - 508 26989850 - PP_3131 - hypothetical protein 3106 61.80 0 3547053..3548429 + 458 26989851 - PP_3132 - polysaccharide biosynthesis protein 3107 60.26 0 3548666..3550132 + 488 26989852 - PP_3133 - GMC oxidoreductase 3108 57.76 -1 3550149..3550844 + 231 26989853 - PP_3134 - transferase hexapeptide repeat containing protein 3109 62.07 0 3550846..3551802 + 318 26989854 - PP_3135 - glycosyl transferase, putative 3110 61.33 0 3551811..3552335 + 174 26989855 - PP_3136 - serine O-acetyltransferase, putative 3111 65.44 0 3552341..3553318 + 325 26989856 - PP_3137 - glycosyl transferase, group 2 family protein 3112 60.88 0 3553331..3554332 + 333 26989857 - PP_3138 - VirK domain-containing protein 3113 64.34 0 3554382..3555584 + 400 26989858 - PP_3139 - glycosyl transferase, group 1 family protein 3114 64.56 0 3555581..3556768 + 395 26989859 - PP_3140 - glycosyl transferase, group 2 family protein 3115 64.81 0 3556768..3557520 + 250 26989860 - PP_3141 - WecB/TagA/CpsF family glycosyl transferase 3116 55.77 -1 3557699..3559120 + 473 26989861 - PP_3142 - sugar transferase, putative 3117 65.07 0 3559155..3560096 - 313 26989862 - PP_3143 - LysR family transcriptional regulator 3118 63.62 0 3560243..3561619 + 458 26989863 sda-3 PP_3144 - L-serine dehydratase, iron-sulfur-dependent, single chain form 3119 61.92 0 3561707..3562528 - 273 26989864 - PP_3145 - hypothetical protein 3120 66.36 +1 3562525..3563820 - 431 26989865 - PP_3146 - oxidoreductase, putative 3121 61.52 0 3563834..3564922 - 362 26989866 - PP_3147 - periplasmic polyamine-binding protein, putative 3122 62.55 0 3565003..3566361 - 452 26989867 - PP_3148 - glutamine synthetase, putative 3123 62.67 0 3566395..3567444 + 349 26989868 - PP_3149 - AraC family transcriptional regulator 3124 63.61 0 3567441..3569438 + 665 26989869 - PP_3150 - hypothetical protein 3125 65.44 0 3569476..3570861 - 461 26989870 - PP_3151 - aldehyde dehydrogenase family protein 3126 63.55 0 3570969..3571835 + 288 26989871 - PP_3152 - LysR family transcriptional regulator 3127 63.06 0 3571962..3572405 + 147 26989872 - PP_3153 - hypothetical protein 3128 56.50 -1 3572512..3573180 + 222 26989873 - PP_3154 - hypothetical protein 3129 62.16 0 3573212..3575341 - 709 26989874 - PP_3155 - outer membrane ferric siderophore receptor, putative 3130 64.42 0 3575596..3576486 - 296 26989875 - PP_3156 - universal stress protein 3131 64.52 0 3576612..3577403 + 263 26989876 - PP_3157 - inositol monophosphatase family protein 3132 61.11 0 3577583..3578320 + 245 26989877 - PP_3158 - hypothetical protein 3133 59.35 0 3579863..3580819 + 318 26989878 benR PP_3159 - AraC family transcriptional regulator 3134 52.87 -2 3580902..3581843 + 313 26989879 - PP_3160 - hypothetical protein 3135 61.74 0 3581927..3583285 + 452 26989880 benA PP_3161 - benzoate dioxygenase, alpha subunit 3136 60.70 0 3583282..3583767 + 161 26989881 benB PP_3162 - benzoate dioxygenase, beta subunit 3137 62.81 0 3583840..3584850 + 336 26989882 benC PP_3163 - oxidoreductase FAD/NAD(P)-binding domain protein 3138 67.19 +1 3584985..3585746 + 253 26989883 benD PP_3164 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 3139 62.83 0 3585804..3587132 + 442 26989884 benK PP_3165 - major facilitator transporter 3140 65.46 0 3587162..3588076 + 304 26989885 - PP_3166 - catechol 1,2-dioxygenase 3141 66.75 +1 3588151..3589422 + 423 26989886 benE-2 PP_3167 - benzoate transporter 3142 60.19 0 3589477..3590727 + 416 26989887 benF PP_3168 - benzoate-specific porin 3143 62.22 0 3590802..3591881 + 359 26989888 - PP_3169 - membrane-bound metal-dependent hydrolase 3144 65.24 0 3591950..3592861 + 303 26989889 - PP_3170 - LysR family transcriptional regulator 3145 65.14 0 3592962..3593942 + 326 26989890 - PP_3171 - luciferase family protein 3146 60.13 0 3594018..3595439 - 473 26989891 - PP_3172 - group II intron-encoding maturase 3147 64.66 0 3595905..3597002 - 365 26989892 nemA PP_3173 - N-ethylmaleimide reductase 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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