version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2922 57.77 -1 3352249..3353631 - 460 26989667 - PP_2948 - GntR family transcriptional regulator 2923 58.48 0 3353753..3354619 + 288 26989668 - PP_2949 - hypothetical protein 2924 56.18 -1 3354732..3355208 - 158 26989669 - PP_2950 - hypothetical protein 2925 51.85 -2 3355262..3355828 - 188 26989670 - PP_2951 - TetR family transcriptional regulator 2926 65.10 0 3355954..3356844 - 296 26989671 - PP_2952 - LysR family transcriptional regulator 2927 64.09 0 3356950..3357957 + 335 26989672 - PP_2953 - alcohol dehydrogenase, zinc-containing 2928 60.72 0 3358072..3358458 + 128 26989673 - PP_2954 - hypothetical protein 2929 60.31 0 3358768..3359679 - 303 26989674 - PP_2955 - magnesium/cobalt transporter CorA family protein 2930 61.10 0 3359683..3361263 - 526 26989675 - PP_2956 - ribosomal protein S6 modification protein-related protein 2931 61.37 0 3361358..3362452 + 364 26989676 - PP_2957 - acetyltransferase 2932 58.04 0 3362544..3362798 - 84 26989677 - PP_2958 - glutaredoxin 2933 61.46 0 3362812..3363330 - 172 26989678 - PP_2959 - alkylhydroperoxidase 2934 58.74 0 3363361..3364281 + 306 26989679 - PP_2960 - AraC family transcriptional regulator 2935 62.80 0 3364344..3365222 - 292 26989680 - PP_2961 - LysR family transcriptional regulator 2936 61.78 0 3365330..3366331 + 333 26989681 - PP_2962 - alcohol dehydrogenase, zinc-containing 2937 56.28 -1 3366350..3366532 - 60 26989682 - PP_2963 - hypothetical protein 2938 58.24 0 3366692..3369706 + 1004 26989683 tnpA PP_2964 - Tn4652, transposase 2939 56.20 -1 3369715..3370077 + 120 26989684 - PP_2965 - Tn4652, tnpA repressor protein TnpC, putative 2940 53.22 -2 3370094..3370264 - 56 26989685 - PP_2966 - hypothetical protein 2941 66.06 +1 3370469..3370633 - 54 26989686 - PP_2967 - hypothetical protein 2942 60.93 0 3370638..3371771 - 377 26989687 - PP_2968 - hypothetical protein 2943 55.21 -1 3371782..3372069 - 95 26989688 - PP_2969 - hypothetical protein 2944 59.72 0 3372188..3372547 + 119 26989689 - PP_2970 - hypothetical protein 2945 60.02 0 3372839..3373681 - 280 26989690 - PP_2971 - IS1246 transposase 2946 57.00 -1 3373712..3374011 + 99 26989691 - PP_2972 - hypothetical protein 2947 52.26 -2 3374050..3374403 + 117 26989692 dgkA-2 PP_2973 - diacylglycerol kinase 2948 54.75 -1 3374438..3376090 + 550 26989693 - PP_2974 - hypothetical protein 2949 58.05 0 3376156..3376422 + 88 26989694 - PP_2975 - transposase family protein 2950 63.14 0 3376570..3376881 + 103 26989695 - PP_2976 - Tn4652, transposase subunit A 2951 57.40 -1 3376878..3377783 + 301 26989696 - PP_2977 - Tn4652, transposase subunit B 2952 54.48 -1 3377949..3378350 + 133 26989697 - PP_2978 - hypothetical protein 2953 55.94 -1 3378299..3378727 - 142 26989698 - PP_2979 - hypothetical protein 2954 57.38 -1 3378731..3378967 - 78 26989699 - PP_2980 - hypothetical protein 2955 59.77 0 3379174..3380145 - 323 26989700 - PP_2981 - Tn4652, cointegrate resolution protein S 2956 60.26 0 3380326..3381324 + 332 26989701 - PP_2982 - Tn4652, cointegrate resolution protein T, putative 2957 59.06 0 3381352..3382008 + 218 26989702 - PP_2983 - hypothetical protein 2958 59.58 0 3381989..3382468 + 159 26989703 - PP_2984 - hypothetical protein 2959 54.58 -1 3383517..3384062 - 181 26989704 - PP_2985 - hypothetical protein 2960 59.90 0 3384364..3385413 - 349 26989705 - PP_2986 - oxidoreductase, putative 2961 55.67 -1 3385614..3386177 - 187 26989706 - PP_2987 - hypothetical protein 2962 59.78 0 3386154..3387170 + 338 26989707 - PP_2988 - alcohol dehydrogenase, zinc-containing 2963 62.26 0 3387217..3388011 + 264 26989708 - PP_2989 - short chain dehydrogenase/reductase family oxidoreductase 2964 56.04 -1 3388149..3388628 + 159 26989709 - PP_2990 - MerR family transcriptional regulator 2965 55.62 -1 3388644..3389675 - 343 26989710 - PP_2991 - hypothetical protein 2966 56.57 -1 3389685..3390506 - 273 26989711 - PP_2992 - hypothetical protein 2967 58.87 0 3390574..3390714 + 46 26989712 - PP_2993 - hypothetical protein 2968 59.11 0 3390788..3392044 + 418 26989713 - PP_2994 - NADH:flavin oxidoreductase/NADH oxidase 2969 60.41 0 3392212..3392754 + 180 26989714 - PP_2995 - DNA topology modulation kinase FlaR, putative 2970 56.43 -1 3392817..3393275 - 152 26989715 - PP_2996 - hypothetical protein 2971 65.00 0 3393504..3394403 - 299 26989716 - PP_2997 - LysR family transcriptional regulator 2972 66.98 +1 3394497..3395444 + 315 26989717 - PP_2998 - 2-dehydropantoate 2-reductase, putative 2973 64.66 0 3395441..3395839 + 132 26989718 - PP_2999 - glyoxalase family protein 2974 64.69 0 3395836..3396291 + 151 26989719 - PP_3000 - MaoC domain-containing protein 2975 66.91 +1 3396288..3397520 + 410 26989720 - PP_3001 - CAIB/BAIF family protein 2976 66.67 +1 3397517..3398335 + 272 26989721 aroE-2 PP_3002 - shikimate 5-dehydrogenase 2977 60.73 0 3398340..3398777 + 145 26989722 aroQ-3 PP_3003 - 3-dehydroquinate dehydratase 2978 53.49 -2 3399019..3399276 + 85 26989723 - PP_3004 - hypothetical protein 2979 66.24 +1 3399329..3400030 - 233 26989724 - PP_3005 - hypothetical protein 2980 63.02 0 3400018..3400566 - 182 26989725 - PP_3006 - RNA polymerase sigma factor 2981 63.83 0 3400670..3401197 - 175 26989726 - PP_3007 - hypothetical protein 2982 53.82 -1 3401414..3401701 + 95 26989727 - PP_3008 - hypothetical protein 2983 50.51 -2 3401810..3401908 + 32 26989728 - PP_3009 - hypothetical protein 2984 55.56 -1 3402105..3402473 + 122 26989729 - PP_3010 - hypothetical protein 2985 53.89 -1 3402625..3402984 + 119 26989730 - PP_3011 - hypothetical protein 2986 53.49 -2 3403038..3403166 + 42 26989731 - PP_3012 - hypothetical protein 2987 55.16 -1 3403210..3403461 - 83 26989732 - PP_3013 - hypothetical protein 2988 60.56 0 3403580..3403939 + 119 26989733 - PP_3014 - hypothetical protein 2989 60.29 0 3404307..3404510 + 67 26989734 - PP_3015 - medium chain acyl-CoA ligase 2990 60.67 0 3404647..3405480 + 277 26989735 - PP_3016 - lipopolysaccharide core biosynthesis protein, putative 2991 64.87 0 3405551..3406051 + 166 26989736 ogt PP_3017 - methylated-DNA--protein-cysteine methyltransferase 2992 64.20 0 3406056..3406298 - 80 26989737 - PP_3018 - hypothetical protein 2993 64.92 0 3406295..3407038 - 247 26989738 - PP_3019 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2994 64.88 0 3407253..3407978 + 241 26989739 - PP_3020 - serine/threonine protein phosphatase, putative 2995 65.69 0 3407926..3408540 - 204 26989740 - PP_3021 - amino acid transporter LysE 2996 65.19 0 3408622..3409431 - 269 26989741 - PP_3022 - AraC family transcriptional regulator 2997 63.68 0 3409505..3409939 + 144 26989742 - PP_3023 - amino acid efflux protein, putative 2998 46.87 -2 3409967..3411163 + 398 26989743 - PP_3024 - hypothetical protein 2999 48.63 -2 3412201..3412821 - 206 26989744 - PP_3025 - amino acid transporter LysE 3000 56.77 -1 3412988..3414613 + 541 26989745 - PP_3026 - phage recombinase, putative 3001 59.82 0 3414886..3415104 - 72 26989746 - PP_3027 - hypothetical protein 3002 61.27 0 3415097..3415411 - 104 26989747 - PP_3028 - hypothetical protein 3003 63.83 0 3415408..3417237 - 609 26989748 - PP_3029 - DNA cytosine methyltransferase family protein 3004 58.83 0 3417234..3418037 - 267 26989749 - PP_3030 - hypothetical protein 3005 55.03 -1 3418091..3418408 - 105 26989750 - PP_3031 - pyocin R2_PP, transcriptional activator prtN 3006 61.51 0 3418567..3418857 - 96 26989751 - PP_3032 - DNA-binding protein Roi-related protein 3007 53.83 -1 3419450..3420181 - 243 26989752 - PP_3033 - transcriptional repressor pyocin R2_PP 3008 51.52 -2 3420260..3420523 + 87 26989753 - PP_3034 - regulator protein, putative 3009 54.60 -1 3420434..3420607 - 57 26989754 - PP_3035 - hypothetical protein 3010 60.00 0 3420970..3421149 + 59 26989755 - PP_3036 - hypothetical protein 3011 58.90 0 3421632..3421850 + 72 26989756 - PP_3037 - C4-type zinc finger DksA/TraR family protein 3012 61.15 0 3421840..3424050 + 736 26989757 - PP_3038 - TraC domain-containing protein 3013 56.75 -1 3424047..3424409 + 120 26989758 - PP_3039 - hypothetical protein 3014 62.07 0 3424921..3425268 + 115 26989759 - PP_3040 - pyocin R2_PP, holin 3015 60.46 0 3425433..3426044 + 203 26989760 - PP_3041 - hypothetical protein 3016 60.63 0 3426049..3428085 + 678 26989761 - PP_3042 - terminase, large subunit, putative 3017 63.29 0 3428087..3428293 + 68 26989762 - PP_3043 - hypothetical protein 3018 63.99 0 3428290..3429783 + 497 26989763 - PP_3044 - lambda family phage portal protein 3019 61.08 0 3429780..3430943 + 387 26989764 - PP_3045 - ClpP protease, putative 3020 62.64 0 3430946..3431293 + 115 26989765 - PP_3046 - hypothetical protein 3021 59.64 0 3431355..3432350 + 331 26989766 - PP_3047 - hypothetical protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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