version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2886 63.31 0 3311763..3312656 + 297 26989631 - PP_2912 - hypothetical protein 2887 62.97 0 3312818..3313792 + 324 26989632 hemB-1 PP_2913 - delta-aminolevulinic acid dehydratase 2888 60.75 0 3313951..3315453 + 500 26989633 proP PP_2914 - proline/glycine betaine transporter 2889 68.23 +1 3315454..3316155 - 233 26989634 - PP_2915 - hypothetical protein 2890 60.95 0 3316165..3316794 - 209 26989635 ribE-2 PP_2916 - riboflavin synthase subunit alpha 2891 63.83 0 3316834..3316974 - 46 26989636 - PP_2917 - hypothetical protein 2892 64.49 0 3316967..3319033 - 688 26989637 - PP_2918 - trehalose synthase 2893 65.58 0 3319225..3320142 - 305 26989638 - PP_2919 - LysR family transcriptional regulator 2894 64.43 0 3320263..3321021 + 252 26989639 - PP_2920 - hypothetical protein 2895 63.16 0 3321060..3322001 + 313 26989640 - PP_2921 - allophanate hydrolase subunit 1 2896 66.56 +1 3321998..3322969 + 323 26989641 - PP_2922 - urea amidolyase related protein 2897 66.78 +1 3323032..3323889 - 285 26989642 - PP_2923 - hypothetical protein 2898 66.03 +1 3323880..3325130 - 416 26989643 - PP_2924 - radical SAM domain protein 2899 61.30 0 3325245..3326864 + 539 26989644 mqo-3 PP_2925 - malate:quinone oxidoreductase 2900 63.43 0 3326874..3328202 - 442 26989645 - PP_2926 - UDP-glucose dehydrogenase, putative 2901 65.33 0 3328447..3329493 + 348 26989646 - PP_2927 - hypothetical protein 2902 58.96 0 3329624..3330868 - 414 26989647 - PP_2928 - saccharopine dehydrogenase 2903 59.56 0 3330901..3331998 - 365 26989648 nspC PP_2929 - carboxynorspermidine decarboxylase 2904 66.01 +1 3332184..3333101 - 305 26989649 - PP_2930 - L-serine dehydratase, putative 2905 63.76 0 3333098..3333922 - 274 26989650 - PP_2931 - YheO domain protein 2906 67.02 +1 3333855..3335558 - 567 26989651 - PP_2932 - amidase 2907 62.87 0 3335750..3336592 - 280 26989652 - PP_2933 - putative glutathione S-transferase YghU 2908 66.48 +1 3336794..3337840 + 348 26989653 - PP_2934 - hypothetical protein 2909 66.16 +1 3337802..3338995 - 397 26989654 - PP_2935 - hypothetical protein 2910 60.87 0 3339238..3340824 - 528 26989655 - PP_2936 - ABC transporter ATP-binding protein 2911 58.81 0 3340857..3341276 - 139 26989656 - PP_2937 - integrase, putative 2912 53.28 -2 3341452..3342138 - 228 26989657 - PP_2938 - OsmC family protein 2913 57.65 -1 3342445..3342699 - 84 26989658 - PP_2939 - hypothetical protein 2914 55.79 -1 3342719..3343003 - 94 26989659 - PP_2940 - hypothetical protein 2915 64.25 0 3344340..3345125 - 261 26989660 - PP_2941 - hypothetical protein 2916 59.59 0 3345126..3346496 - 456 26989661 - PP_2942 - response regulator 2917 61.26 0 3346695..3347693 + 332 26989662 - PP_2943 - cytochrome c551 peroxidase, putative 2918 58.35 0 3347690..3349504 + 604 26989663 - PP_2944 - sensor histidine kinase 2919 58.04 0 3349387..3350904 + 505 26989664 - PP_2945 - sensor histidine kinase/response regulator 2920 60.63 0 3351062..3351475 + 137 26989665 - PP_2946 - hypothetical protein 2921 54.84 -1 3351736..3352107 + 123 26989666 - PP_2947 - transcriptional regulator MvaT, P16 subunit, putative 2922 57.77 -1 3352249..3353631 - 460 26989667 - PP_2948 - GntR family transcriptional regulator 2923 58.48 0 3353753..3354619 + 288 26989668 - PP_2949 - hypothetical protein 2924 56.18 -1 3354732..3355208 - 158 26989669 - PP_2950 - hypothetical protein 2925 51.85 -2 3355262..3355828 - 188 26989670 - PP_2951 - TetR family transcriptional regulator 2926 65.10 0 3355954..3356844 - 296 26989671 - PP_2952 - LysR family transcriptional regulator 2927 64.09 0 3356950..3357957 + 335 26989672 - PP_2953 - alcohol dehydrogenase, zinc-containing 2928 60.72 0 3358072..3358458 + 128 26989673 - PP_2954 - hypothetical protein 2929 60.31 0 3358768..3359679 - 303 26989674 - PP_2955 - magnesium/cobalt transporter CorA family protein 2930 61.10 0 3359683..3361263 - 526 26989675 - PP_2956 - ribosomal protein S6 modification protein-related protein 2931 61.37 0 3361358..3362452 + 364 26989676 - PP_2957 - acetyltransferase 2932 58.04 0 3362544..3362798 - 84 26989677 - PP_2958 - glutaredoxin 2933 61.46 0 3362812..3363330 - 172 26989678 - PP_2959 - alkylhydroperoxidase 2934 58.74 0 3363361..3364281 + 306 26989679 - PP_2960 - AraC family transcriptional regulator 2935 62.80 0 3364344..3365222 - 292 26989680 - PP_2961 - LysR family transcriptional regulator 2936 61.78 0 3365330..3366331 + 333 26989681 - PP_2962 - alcohol dehydrogenase, zinc-containing 2937 56.28 -1 3366350..3366532 - 60 26989682 - PP_2963 - hypothetical protein 2938 58.24 0 3366692..3369706 + 1004 26989683 tnpA PP_2964 - Tn4652, transposase 2939 56.20 -1 3369715..3370077 + 120 26989684 - PP_2965 - Tn4652, tnpA repressor protein TnpC, putative 2940 53.22 -2 3370094..3370264 - 56 26989685 - PP_2966 - hypothetical protein 2941 66.06 +1 3370469..3370633 - 54 26989686 - PP_2967 - hypothetical protein 2942 60.93 0 3370638..3371771 - 377 26989687 - PP_2968 - hypothetical protein 2943 55.21 -1 3371782..3372069 - 95 26989688 - PP_2969 - hypothetical protein 2944 59.72 0 3372188..3372547 + 119 26989689 - PP_2970 - hypothetical protein 2945 60.02 0 3372839..3373681 - 280 26989690 - PP_2971 - IS1246 transposase 2946 57.00 -1 3373712..3374011 + 99 26989691 - PP_2972 - hypothetical protein 2947 52.26 -2 3374050..3374403 + 117 26989692 dgkA-2 PP_2973 - diacylglycerol kinase 2948 54.75 -1 3374438..3376090 + 550 26989693 - PP_2974 - hypothetical protein 2949 58.05 0 3376156..3376422 + 88 26989694 - PP_2975 - transposase family protein 2950 63.14 0 3376570..3376881 + 103 26989695 - PP_2976 - Tn4652, transposase subunit A 2951 57.40 -1 3376878..3377783 + 301 26989696 - PP_2977 - Tn4652, transposase subunit B 2952 54.48 -1 3377949..3378350 + 133 26989697 - PP_2978 - hypothetical protein 2953 55.94 -1 3378299..3378727 - 142 26989698 - PP_2979 - hypothetical protein 2954 57.38 -1 3378731..3378967 - 78 26989699 - PP_2980 - hypothetical protein 2955 59.77 0 3379174..3380145 - 323 26989700 - PP_2981 - Tn4652, cointegrate resolution protein S 2956 60.26 0 3380326..3381324 + 332 26989701 - PP_2982 - Tn4652, cointegrate resolution protein T, putative 2957 59.06 0 3381352..3382008 + 218 26989702 - PP_2983 - hypothetical protein 2958 59.58 0 3381989..3382468 + 159 26989703 - PP_2984 - hypothetical protein 2959 54.58 -1 3383517..3384062 - 181 26989704 - PP_2985 - hypothetical protein 2960 59.90 0 3384364..3385413 - 349 26989705 - PP_2986 - oxidoreductase, putative 2961 55.67 -1 3385614..3386177 - 187 26989706 - PP_2987 - hypothetical protein 2962 59.78 0 3386154..3387170 + 338 26989707 - PP_2988 - alcohol dehydrogenase, zinc-containing 2963 62.26 0 3387217..3388011 + 264 26989708 - PP_2989 - short chain dehydrogenase/reductase family oxidoreductase 2964 56.04 -1 3388149..3388628 + 159 26989709 - PP_2990 - MerR family transcriptional regulator 2965 55.62 -1 3388644..3389675 - 343 26989710 - PP_2991 - hypothetical protein 2966 56.57 -1 3389685..3390506 - 273 26989711 - PP_2992 - hypothetical protein 2967 58.87 0 3390574..3390714 + 46 26989712 - PP_2993 - hypothetical protein 2968 59.11 0 3390788..3392044 + 418 26989713 - PP_2994 - NADH:flavin oxidoreductase/NADH oxidase 2969 60.41 0 3392212..3392754 + 180 26989714 - PP_2995 - DNA topology modulation kinase FlaR, putative 2970 56.43 -1 3392817..3393275 - 152 26989715 - PP_2996 - hypothetical protein 2971 65.00 0 3393504..3394403 - 299 26989716 - PP_2997 - LysR family transcriptional regulator 2972 66.98 +1 3394497..3395444 + 315 26989717 - PP_2998 - 2-dehydropantoate 2-reductase, putative 2973 64.66 0 3395441..3395839 + 132 26989718 - PP_2999 - glyoxalase family protein 2974 64.69 0 3395836..3396291 + 151 26989719 - PP_3000 - MaoC domain-containing protein 2975 66.91 +1 3396288..3397520 + 410 26989720 - PP_3001 - CAIB/BAIF family protein 2976 66.67 +1 3397517..3398335 + 272 26989721 aroE-2 PP_3002 - shikimate 5-dehydrogenase 2977 60.73 0 3398340..3398777 + 145 26989722 aroQ-3 PP_3003 - 3-dehydroquinate dehydratase 2978 53.49 -2 3399019..3399276 + 85 26989723 - PP_3004 - hypothetical protein 2979 66.24 +1 3399329..3400030 - 233 26989724 - PP_3005 - hypothetical protein 2980 63.02 0 3400018..3400566 - 182 26989725 - PP_3006 - RNA polymerase sigma factor 2981 63.83 0 3400670..3401197 - 175 26989726 - PP_3007 - hypothetical protein 2982 53.82 -1 3401414..3401701 + 95 26989727 - PP_3008 - hypothetical protein 2983 50.51 -2 3401810..3401908 + 32 26989728 - PP_3009 - hypothetical protein 2984 55.56 -1 3402105..3402473 + 122 26989729 - PP_3010 - hypothetical protein 2985 53.89 -1 3402625..3402984 + 119 26989730 - PP_3011 - hypothetical protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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