version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2699 59.12 0 3110953..3111495 - 180 26989444 pfpI PP_2725 - protease PfpI 2700 57.58 -1 3111585..3112277 - 230 26989445 - PP_2726 - hypothetical protein 2701 63.68 0 3112373..3113143 - 256 26989446 - PP_2727 - C-factor, putative 2702 61.99 0 3113222..3113713 - 163 26989447 - PP_2728 - hypothetical protein 2703 59.38 0 3113697..3114410 + 237 26989448 - PP_2729 - hypothetical protein 2704 63.13 0 3114413..3114949 + 178 26989449 - PP_2730 - putative lipoprotein 2705 66.99 +1 3114946..3115251 + 101 26989450 - PP_2731 - hypothetical protein 2706 62.67 0 3115260..3116786 + 508 26989451 - PP_2732 - hypothetical protein 2707 68.92 +1 3116903..3117391 - 162 26989452 - PP_2733 - hypothetical protein 2708 64.56 0 3117391..3118578 - 395 26989453 cfa PP_2734 - cyclopropane-fatty-acyl-phospholipid synthase 2709 63.33 0 3118628..3119437 - 269 26989454 - PP_2735 - hypothetical protein 2710 61.78 0 3119434..3120681 - 415 26989455 - PP_2736 - amine oxidase 2711 67.86 +1 3120688..3121440 - 250 26989456 - PP_2737 - short chain dehydrogenase/reductase family oxidoreductase 2712 61.94 0 3121437..3121859 - 140 26989457 - PP_2738 - hypothetical protein 2713 60.09 0 3121963..3122418 - 151 26989458 - PP_2739 - sensory box protein, putative 2714 66.22 +1 3122563..3123450 + 295 26989459 - PP_2740 - MerR family transcriptional regulator 2715 61.60 0 3123612..3125249 - 545 26989460 - PP_2741 - MscS mechanosensitive ion channel 2716 55.56 -1 3125317..3125676 - 119 26989461 - PP_2742 - hypothetical protein 2717 56.73 -1 3125673..3126266 - 197 26989462 - PP_2743 - acetyltransferase 2718 64.17 0 3126462..3127421 - 319 26989463 - PP_2744 - ribose-phosphate pyrophosphokinase family protein 2719 62.10 0 3127517..3128413 - 298 26989464 - PP_2745 - universal stress protein 2720 62.84 0 3128751..3130160 + 469 26989465 - PP_2746 - hypothetical protein 2721 65.64 0 3130181..3131152 + 323 26989466 - PP_2747 - hypothetical protein 2722 64.54 0 3131119..3131919 + 266 26989467 - PP_2748 - branched-chain amino acid ABC transporter, ATP-binding protein, putative 2723 64.97 0 3131916..3132797 + 293 26989468 - PP_2749 - branched-chain amino acid ABC transporter, permease protein, putative 2724 64.88 0 3132802..3133866 + 354 26989469 - PP_2750 - branched-chain amino acid ABC transporter, permease protein, putative 2725 64.21 0 3133945..3135285 + 446 26989470 - PP_2751 - hypothetical protein 2726 64.42 0 3135345..3136679 + 444 26989471 - PP_2752 - hypothetical protein 2727 63.44 0 3136796..3137569 + 257 26989472 - PP_2753 - branched-chain amino acid ABC transporter, ATP-binding protein, putative 2728 62.08 0 3137769..3139208 + 479 26989473 - PP_2754 - porin, putative 2729 66.10 +1 3139444..3140688 + 414 26989474 - PP_2755 - hypothetical protein 2730 68.22 +1 3140698..3141084 + 128 26989475 - PP_2756 - hypothetical protein 2731 63.89 0 3141081..3142052 + 323 26989476 - PP_2757 - sugar-binding protein, putative 2732 64.53 0 3142049..3143077 + 342 26989477 - PP_2758 - ribose ABC transporter, periplasmic ribose-binding protein, putative 2733 67.45 +1 3143074..3144612 + 512 26989478 - PP_2759 - ribose ABC transporter, ATP-binding protein, putative 2734 64.95 0 3144527..3145573 + 348 26989479 - PP_2760 - ribose transport permease protein, putative 2735 62.92 0 3145575..3146561 + 328 26989480 - PP_2761 - ribose ABC transporter, permease protein, putative 2736 65.13 0 3146627..3147865 - 412 26989481 - PP_2762 - hypothetical protein 2737 55.13 -1 3147847..3148002 + 51 26989482 - PP_2763 - hypothetical protein 2738 64.88 0 3148204..3148764 + 186 26989483 msuE PP_2764 - NADH-dependent FMN reductase MsuE 2739 62.00 0 3148791..3149882 + 363 26989484 - PP_2765 - luciferase family protein 2740 70.73 +2 3149894..3151024 + 376 26989485 - PP_2766 - long-chain-fatty-acid--CoA ligase-related protein 2741 64.15 0 3151034..3151867 + 277 26989486 - PP_2767 - branched-chain amino acid ABC transporter, ATP-binding protein, putative 2742 66.89 +1 3151843..3152724 + 293 26989487 - PP_2768 - branched-chain amino acid ABC transporter, permease protein, putative 2743 63.54 0 3152737..3153726 + 329 26989488 - PP_2769 - branched-chain amino acid ABC transporter, permease protein, putative 2744 62.90 0 3153794..3155119 + 441 26989489 - PP_2770 - hypothetical protein 2745 65.04 0 3155156..3156259 - 367 26989490 - PP_2771 - sigma-54 dependent transcriptional regulator 2746 64.98 0 3156268..3157455 - 395 26989491 - PP_2772 - monooxygenase, putative 2747 58.49 0 3157511..3157669 - 52 26989492 - PP_2773 - hypothetical protein 2748 63.09 0 3157979..3160075 + 698 26989493 - PP_2774 - glycine betaine/L-proline ABC transporter, ATPase/permease fusion protein, putative 2749 59.02 0 3160006..3161130 + 374 26989494 - PP_2775 - glycine betaine/L-proline ABC transporter, periplasmic binding protein, putative 2750 64.39 0 3161127..3162050 + 307 26989495 - PP_2776 - homocysteine S-methyltransferase family protein 2751 60.35 0 3162630..3163199 + 189 26989496 - PP_2777 - acyl carrier protein, putative 2752 61.74 0 3163208..3164485 + 425 26989497 - PP_2778 - 3-oxoacyl-(acyl-carrier-protein) synthase II 2753 62.60 0 3164487..3165569 + 360 26989498 - PP_2779 - beta-ketoacyl synthase, putative 2754 64.74 0 3165566..3166864 + 432 26989499 - PP_2780 - 3-oxoacyl-(acyl-carrier-protein) synthase II 2755 64.95 0 3166735..3168072 + 445 26989500 - PP_2781 - beta-ketoacyl synthase 2756 60.59 0 3168103..3170982 + 959 26989501 - PP_2782 - pyridoxalphosphate dependent aminotransferase, class III 2757 61.79 0 3170992..3171729 + 245 26989502 - PP_2783 - 3-oxoacyl-(acyl-carrier-protein) reductase 2758 61.05 0 3171726..3172490 + 254 26989503 - PP_2784 - short chain dehydrogenase/reductase family oxidoreductase 2759 62.54 0 3172493..3173776 + 427 26989504 - PP_2785 - hypothetical protein 2760 58.78 0 3173827..3174663 + 278 26989505 - PP_2786 - hypothetical protein 2761 58.31 0 3174697..3177306 + 869 26989506 - PP_2787 - transporter, putative 2762 55.47 -1 3177376..3177759 - 127 26989507 - PP_2788 - MerR family transcriptional regulator 2763 58.75 0 3177923..3178528 - 201 26989508 - PP_2789 - oxidoreductase, putative 2764 64.52 0 3178718..3180670 - 650 26989509 - PP_2790 - sigma-54 dependent sensory box protein 2765 66.05 +1 3180801..3181931 + 376 26989510 - PP_2791 - aminoglycoside phosphotransferase 2766 67.23 +1 3181928..3182284 + 118 26989511 - PP_2792 - hypothetical protein 2767 65.73 0 3182338..3183510 + 390 26989512 - PP_2793 - acyl-CoA dehydrogenase family protein 2768 70.18 +2 3183510..3184277 + 255 26989513 - PP_2794 - short chain dehydrogenase/reductase family oxidoreductase 2769 66.06 +1 3184361..3186007 + 548 26989514 - PP_2795 - acyl-CoA synthetase 2770 61.42 0 3186062..3186385 + 107 26989515 - PP_2796 - hypothetical protein 2771 63.35 0 3186382..3188040 + 552 26989516 actP PP_2797 - acetate permease 2772 62.49 0 3188302..3189210 - 302 26989517 - PP_2798 - oxidoreductase, putative 2773 61.81 0 3189267..3190646 - 459 26989518 - PP_2799 - aminotransferase 2774 66.27 +1 3190742..3191995 - 417 26989519 - PP_2800 - diaminobutyrate--2-oxoglutarate aminotransferase 2775 65.54 0 3192033..3193457 - 474 26989520 - PP_2801 - gamma-aminobutyraldehyde dehydrogenase 2776 65.47 0 3193535..3194866 - 443 26989521 - PP_2802 - amino acid permease family protein 2777 64.05 0 3194879..3196063 - 394 26989522 dhaT PP_2803 - 1,3-propanediol dehydrogenase 2778 66.10 +1 3196255..3197130 - 291 26989523 - PP_2804 - alpha/beta fold family hydrolase 2779 61.17 0 3197127..3198653 - 508 26989524 - PP_2805 - monooxygenase flavin-binding family protein 2780 60.31 0 3198930..3199511 - 193 26989525 - PP_2806 - TetR family transcriptional regulator 2781 62.27 0 3199762..3200649 + 295 26989526 - PP_2807 - hypothetical protein 2782 62.57 0 3200670..3202037 + 455 26989527 - PP_2808 - oxidoreductase, putative 2783 53.03 -2 3202049..3202774 + 241 26989528 - PP_2809 - hypothetical protein 2784 61.46 0 3203247..3204668 + 473 26989529 - PP_2810 - hypothetical protein 2785 61.75 0 3204694..3206340 + 548 26989530 - PP_2811 - hypothetical protein 2786 62.28 0 3206349..3208763 + 804 26989531 - PP_2812 - transporter, putative 2787 65.11 0 3208774..3209736 + 320 26989532 - PP_2813 - BNR domain-containing protein 2788 60.57 0 3209853..3210722 - 289 26989533 - PP_2814 - hypothetical protein 2789 65.07 0 3210961..3212214 + 417 26989534 - PP_2815 - hypothetical protein 2790 62.43 0 3212273..3212839 - 188 26989535 - PP_2816 - transcriptional regulator NfxB, putative 2791 68.95 +1 3212931..3214067 + 378 26989536 mexC PP_2817 - multidrug efflux RND membrane fusion protein MexC 2792 65.26 0 3214083..3217211 + 1042 26989537 mexD PP_2818 - multidrug efflux RND transporter MexD 2793 68.30 +1 3217208..3218614 + 468 26989538 oprJ PP_2819 - outer membrane protein OprJ 2794 65.05 0 3218697..3219254 - 185 26989539 nfxB PP_2820 - transcriptional regulator NfxB 2795 61.98 0 3219432..3219836 - 134 26989540 - PP_2821 - hypothetical protein 2796 62.75 0 3219827..3221053 + 408 26989541 - PP_2822 - hypothetical protein 2797 63.40 0 3221038..3222690 - 550 26989542 - PP_2823 - methyl-accepting chemotaxis transducer 2798 60.94 0 3223250..3223930 - 226 26989543 - PP_2824 - TetR family transcriptional regulator 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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