version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2629 58.97 0 3042903..3043136 + 77 26989374 - PP_2655 - hypothetical protein 2630 60.17 0 3043339..3044385 + 348 26989375 - PP_2656 - phosphate ABC transporter, periplasmic phosphate-binding protein 2631 61.40 0 3044456..3045424 + 322 26989376 - PP_2657 - phosphate ABC transporter inner membrane protein 2632 63.65 0 3045421..3046314 + 297 26989377 - PP_2658 - phosphate ABC transporter inner membrane protein 2633 59.40 0 3046311..3047150 + 279 26989378 - PP_2659 - phosphate ABC transporter ATPase 2634 58.69 0 3047167..3047943 + 258 26989379 - PP_2660 - hypothetical protein 2635 63.67 0 3047943..3048542 + 199 26989380 - PP_2661 - hypothetical protein 2636 60.44 0 3048838..3050025 + 395 26989381 - PP_2662 - hypothetical protein 2637 63.49 0 3050166..3051329 + 387 26989382 - PP_2663 - hypothetical protein 2638 62.65 0 3051229..3053196 + 655 26989383 - PP_2664 - PAS/PAC sensor hybrid histidine kinase 2639 58.26 0 3053242..3053907 - 221 26989384 agmR PP_2665 - LuxR family two component transcriptional regulator 2640 63.64 0 3053962..3054522 - 186 26989385 - PP_2666 - hypothetical protein 2641 61.24 0 3054830..3055621 - 263 26989386 - PP_2667 - ABC transporter 2642 67.21 +1 3055618..3056358 - 246 26989387 - PP_2668 - efflux ABC transporter ATP-binding protein 2643 63.54 0 3056355..3057344 - 329 26989388 - PP_2669 - YVTN family beta-propeller repeat-containing protein 2644 66.14 +1 3057324..3058658 + 444 26989389 - PP_2670 - hypothetical protein 2645 66.27 +1 3058719..3059993 + 424 26989390 - PP_2671 - integral membrane sensor signal transduction histidine kinase 2646 64.01 0 3059993..3060631 + 212 26989391 - PP_2672 - LuxR family DNA-binding response regulator 2647 63.79 0 3060837..3061496 - 219 26989392 - PP_2673 - pentapeptide repeat-containing protein 2648 63.55 0 3061563..3063458 - 631 26989393 qedH PP_2674 - quinoprotein ethanol dehydrogenase 2649 65.15 0 3063713..3064174 + 153 26989394 - PP_2675 - cytochrome c-type protein 2650 64.62 0 3064129..3065055 + 308 26989395 - PP_2676 - periplasmic binding protein, putative 2651 66.67 +1 3065058..3065825 + 255 26989396 - PP_2677 - hypothetical protein 2652 64.94 0 3065864..3066787 + 307 26989397 - PP_2678 - beta-lactamase domain protein 2653 63.98 0 3066959..3068746 + 595 26989398 - PP_2679 - quinoprotein ethanol dehydrogenase, putative 2654 62.46 0 3068909..3070429 + 506 26989399 - PP_2680 - aldehyde dehydrogenase family protein 2655 63.37 0 3070783..3071055 + 90 26989400 - PP_2681 - pyrroloquinoline quinone biosynthesis protein PqqD 2656 63.57 0 3071145..3072308 + 387 26989401 - PP_2682 - iron-containing alcohol dehydrogenase 2657 64.55 0 3072259..3073962 + 567 26989402 - PP_2683 - PAS/PAC sensor hybrid histidine kinase 2658 51.34 -2 3074392..3075102 + 236 26989403 - PP_2684 - hypothetical protein 2659 59.61 0 3075327..3076049 - 240 26989404 - PP_2685 - hypothetical protein 2660 65.00 0 3076123..3076902 - 259 26989405 - PP_2686 - transglutaminase-like domain-containing protein 2661 63.09 0 3076899..3077849 - 316 26989406 - PP_2687 - hypothetical protein 2662 62.98 0 3077853..3079262 - 469 26989407 - PP_2688 - hypothetical protein 2663 62.63 0 3079696..3080067 - 123 26989408 - PP_2689 - endoribonuclease, putative 2664 63.96 0 3080095..3080796 - 233 26989409 - PP_2690 - hypothetical protein 2665 63.00 0 3080793..3082511 - 572 26989410 - PP_2691 - hypothetical protein 2666 62.99 0 3082514..3084064 - 516 26989411 - PP_2692 - BCCT family transporter 2667 64.74 0 3084120..3085106 - 328 26989412 - PP_2693 - dipeptidase, putative 2668 65.28 0 3085120..3086562 - 480 26989413 - PP_2694 - aldehyde dehydrogenase family protein 2669 62.10 0 3086649..3087545 + 298 26989414 - PP_2695 - LysR family transcriptional regulator 2670 64.09 0 3087612..3088541 - 309 26989415 metR-2 PP_2696 - transcriptional activator MetR 2671 59.79 0 3088640..3089221 - 193 26989416 - PP_2697 - flavin reductase domain-containing protein 2672 56.71 -1 3089175..3090209 - 344 26989417 metE PP_2698 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2673 53.56 -2 3090236..3091288 - 350 26989418 - PP_2699 - hypothetical protein 2674 60.08 0 3091450..3091950 + 166 26989419 - PP_2700 - redoxin domain protein 2675 59.96 0 3092037..3092975 + 312 26989420 - PP_2701 - LysR family transcriptional regulator 2676 64.37 0 3092952..3094082 - 376 26989421 - PP_2702 - hypothetical protein 2677 62.06 0 3094150..3095757 + 535 26989422 - PP_2703 - major facilitator transporter 2678 61.18 0 3095759..3096943 + 394 26989423 - PP_2704 - M20/M25/M40 family peptidase 2679 58.93 0 3096994..3097329 + 111 26989424 - PP_2705 - hypothetical protein 2680 64.20 0 3097395..3097637 + 80 26989425 - PP_2706 - hypothetical protein 2681 62.16 0 3097634..3098431 + 265 26989426 - PP_2707 - exodeoxyribonuclease III, putative 2682 61.53 0 3098549..3099229 + 226 26989427 - PP_2708 - hypothetical protein 2683 64.22 0 3099219..3100688 + 489 26989428 - PP_2709 - long-chain-fatty-acid--CoA ligase, putative 2684 63.88 0 3100697..3101377 + 226 26989429 - PP_2710 - hypothetical protein 2685 63.07 0 3101364..3102170 + 268 26989430 - PP_2711 - short chain dehydrogenase 2686 60.12 0 3102167..3102808 + 213 26989431 - PP_2712 - hypothetical protein 2687 60.63 0 3102811..3103473 + 220 26989432 - PP_2713 - DNA-binding response regulator 2688 62.27 0 3103470..3104834 + 454 26989433 - PP_2714 - sensor histidine kinase 2689 62.11 0 3104847..3105548 - 233 26989434 arsH PP_2715 - arsH protein 2690 62.63 0 3105562..3106032 - 156 26989435 arsC-3 PP_2716 - arsenate reductase 2691 62.85 0 3106061..3107344 - 427 26989436 arsB-2 PP_2717 - arsenite efflux transporter 2692 59.77 0 3107366..3107713 - 115 26989437 arsR-2 PP_2718 - arsenic resistance transcriptional regulator 2693 59.05 0 3107899..3108003 - 34 26989438 - PP_2719 - hypothetical protein 2694 59.46 0 3108077..3108298 + 73 26989439 - PP_2720 - hypothetical protein 2695 59.54 0 3108277..3108627 - 116 26989440 - PP_2721 - hypothetical protein 2696 55.27 -1 3108687..3109151 - 154 26989441 - PP_2722 - hemerythrin HHE cation binding domain protein 2697 60.14 0 3109320..3110177 - 285 26989442 - PP_2723 - short chain dehydrogenase/reductase family oxidoreductase 2698 57.90 0 3110372..3110896 + 174 26989443 - PP_2724 - hypothetical protein 2699 59.12 0 3110953..3111495 - 180 26989444 pfpI PP_2725 - protease PfpI 2700 57.58 -1 3111585..3112277 - 230 26989445 - PP_2726 - hypothetical protein 2701 63.68 0 3112373..3113143 - 256 26989446 - PP_2727 - C-factor, putative 2702 61.99 0 3113222..3113713 - 163 26989447 - PP_2728 - hypothetical protein 2703 59.38 0 3113697..3114410 + 237 26989448 - PP_2729 - hypothetical protein 2704 63.13 0 3114413..3114949 + 178 26989449 - PP_2730 - putative lipoprotein 2705 66.99 +1 3114946..3115251 + 101 26989450 - PP_2731 - hypothetical protein 2706 62.67 0 3115260..3116786 + 508 26989451 - PP_2732 - hypothetical protein 2707 68.92 +1 3116903..3117391 - 162 26989452 - PP_2733 - hypothetical protein 2708 64.56 0 3117391..3118578 - 395 26989453 cfa PP_2734 - cyclopropane-fatty-acyl-phospholipid synthase 2709 63.33 0 3118628..3119437 - 269 26989454 - PP_2735 - hypothetical protein 2710 61.78 0 3119434..3120681 - 415 26989455 - PP_2736 - amine oxidase 2711 67.86 +1 3120688..3121440 - 250 26989456 - PP_2737 - short chain dehydrogenase/reductase family oxidoreductase 2712 61.94 0 3121437..3121859 - 140 26989457 - PP_2738 - hypothetical protein 2713 60.09 0 3121963..3122418 - 151 26989458 - PP_2739 - sensory box protein, putative 2714 66.22 +1 3122563..3123450 + 295 26989459 - PP_2740 - MerR family transcriptional regulator 2715 61.60 0 3123612..3125249 - 545 26989460 - PP_2741 - MscS mechanosensitive ion channel 2716 55.56 -1 3125317..3125676 - 119 26989461 - PP_2742 - hypothetical protein 2717 56.73 -1 3125673..3126266 - 197 26989462 - PP_2743 - acetyltransferase 2718 64.17 0 3126462..3127421 - 319 26989463 - PP_2744 - ribose-phosphate pyrophosphokinase family protein 2719 62.10 0 3127517..3128413 - 298 26989464 - PP_2745 - universal stress protein 2720 62.84 0 3128751..3130160 + 469 26989465 - PP_2746 - hypothetical protein 2721 65.64 0 3130181..3131152 + 323 26989466 - PP_2747 - hypothetical protein 2722 64.54 0 3131119..3131919 + 266 26989467 - PP_2748 - branched-chain amino acid ABC transporter, ATP-binding protein, putative 2723 64.97 0 3131916..3132797 + 293 26989468 - PP_2749 - branched-chain amino acid ABC transporter, permease protein, putative 2724 64.88 0 3132802..3133866 + 354 26989469 - PP_2750 - branched-chain amino acid ABC transporter, permease protein, putative 2725 64.21 0 3133945..3135285 + 446 26989470 - PP_2751 - hypothetical protein 2726 64.42 0 3135345..3136679 + 444 26989471 - PP_2752 - hypothetical protein 2727 63.44 0 3136796..3137569 + 257 26989472 - PP_2753 - branched-chain amino acid ABC transporter, ATP-binding protein, putative 2728 62.08 0 3137769..3139208 + 479 26989473 - PP_2754 - porin, putative 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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