version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2581 65.63 0 2980628..2982361 - 577 26989326 - PP_2607 - fumarate reductase/succinate dehydrogenase flavoprotein domain protein 2582 65.31 0 2982366..2983175 - 269 26989327 - PP_2608 - shikimate dehydrogenase family protein 2583 61.48 0 2983332..2984102 + 256 26989328 - PP_2609 - IclR family transcriptional regulator 2584 60.08 0 2984253..2984510 - 85 26989329 - PP_2610 - hypothetical protein 2585 50.94 -2 2984507..2985466 - 319 26989330 - PP_2611 - hypothetical protein 2586 58.68 0 2985405..2988395 - 996 26989331 - PP_2612 - hypothetical protein 2587 57.83 0 2988388..2989338 - 316 26989332 - PP_2613 - hypothetical protein 2588 60.49 0 2989308..2991476 - 722 26989333 vgrG-1 PP_2614 - vgrG protein 2589 55.43 -1 2991551..2992066 - 171 26989334 hcp-1 PP_2615 - hcp protein 2590 59.54 0 2992200..2993069 - 289 26989335 - PP_2616 - hypothetical protein 2591 62.71 0 2993071..2994408 - 445 26989336 - PP_2617 - hypothetical protein 2592 62.16 0 2994464..2995261 - 265 26989337 - PP_2618 - hypothetical protein 2593 61.93 0 2995258..2995827 - 189 26989338 - PP_2619 - FHA domain-containing protein 2594 62.73 0 2995824..2996840 - 338 26989339 - PP_2620 - hypothetical protein 2595 59.03 0 2996804..2998570 - 588 26989340 - PP_2621 - hypothetical protein 2596 63.02 0 2998574..2998984 - 136 26989341 - PP_2622 - hypothetical protein 2597 57.55 -1 2998981..3000471 - 496 26989342 - PP_2623 - hypothetical protein 2598 60.52 0 3000489..3000992 - 167 26989343 - PP_2624 - hypothetical protein 2599 61.64 0 3001274..3001969 + 231 26989344 - PP_2625 - hypothetical protein 2600 62.57 0 3001957..3003420 + 487 26989345 - PP_2626 - hypothetical protein 2601 61.64 0 3003417..3007037 + 1206 26989346 - PP_2627 - hypothetical protein 2602 60.95 0 3007115..3009091 - 658 26989347 - PP_2628 - ABC transporter ATP-binding protein 2603 60.05 0 3009133..3009903 + 256 26989348 - PP_2629 - hypothetical protein 2604 64.91 0 3009908..3010762 + 284 26989349 - PP_2630 - hypothetical protein 2605 62.90 0 3010759..3010944 + 61 26989350 - PP_2631 - hypothetical protein 2606 64.44 0 3010937..3012550 + 537 26989351 - PP_2632 - hypothetical protein 2607 63.93 0 3012547..3012765 + 72 26989352 - PP_2633 - hypothetical protein 2608 65.68 0 3012762..3013469 + 235 26989353 - PP_2634 - cellulose synthase, putative 2609 64.90 0 3013466..3016075 + 869 26989354 bcsA PP_2635 - cellulose synthase catalytic subunit 2610 64.30 0 3016075..3018357 + 760 26989355 - PP_2636 - cellulose synthase regulator protein 2611 66.13 +1 3018360..3019472 + 370 26989356 - PP_2637 - endo-1,4-D-glucanase 2612 65.73 0 3019460..3022978 + 1172 26989357 - PP_2638 - cellulose synthase subunit BcsC 2613 61.82 0 3023316..3024182 + 288 26989358 - PP_2639 - dihydrodipicolinate synthase 2614 61.22 0 3024336..3024794 - 152 26989359 - PP_2640 - acetyltransferase 2615 62.89 0 3024833..3026632 - 599 26989360 - PP_2641 - iron-sulfur cluster-binding protein 2616 63.38 0 3026633..3028123 + 496 26989361 - PP_2642 - GntR family transcriptional regulator 2617 63.04 0 3028345..3029997 + 550 26989362 - PP_2643 - methyl-accepting chemotaxis sensory transducer 2618 67.35 +1 3030247..3030393 + 48 26989363 - PP_2644 - hypothetical protein 2619 62.50 0 3030691..3033453 + 920 26989364 mgtB PP_2645 - magnesium-translocating P-type ATPase 2620 64.90 0 3033457..3033852 + 131 26989365 - PP_2646 - hypothetical protein 2621 63.08 0 3033959..3035185 - 408 26989366 - PP_2647 - major facilitator family transporter 2622 62.37 0 3035478..3036407 - 309 26989367 - PP_2648 - universal stress protein 2623 62.95 0 3036642..3037583 - 313 26989368 - PP_2649 - LysR family transcriptional regulator 2624 64.65 0 3037726..3038868 + 380 26989369 gbd PP_2650 - iron-containing alcohol dehydrogenase 2625 63.02 0 3038913..3040256 + 447 26989370 - PP_2651 - major facilitator family transporter 2626 62.72 0 3040395..3041180 + 261 26989371 - PP_2652 - hydratase/decarboxylase 2627 64.96 0 3041170..3041988 - 272 26989372 - PP_2653 - Cro/CI family transcriptional regulator 2628 60.09 0 3042406..3042831 + 141 26989373 - PP_2654 - membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) 2629 58.97 0 3042903..3043136 + 77 26989374 - PP_2655 - hypothetical protein 2630 60.17 0 3043339..3044385 + 348 26989375 - PP_2656 - phosphate ABC transporter, periplasmic phosphate-binding protein 2631 61.40 0 3044456..3045424 + 322 26989376 - PP_2657 - phosphate ABC transporter inner membrane protein 2632 63.65 0 3045421..3046314 + 297 26989377 - PP_2658 - phosphate ABC transporter inner membrane protein 2633 59.40 0 3046311..3047150 + 279 26989378 - PP_2659 - phosphate ABC transporter ATPase 2634 58.69 0 3047167..3047943 + 258 26989379 - PP_2660 - hypothetical protein 2635 63.67 0 3047943..3048542 + 199 26989380 - PP_2661 - hypothetical protein 2636 60.44 0 3048838..3050025 + 395 26989381 - PP_2662 - hypothetical protein 2637 63.49 0 3050166..3051329 + 387 26989382 - PP_2663 - hypothetical protein 2638 62.65 0 3051229..3053196 + 655 26989383 - PP_2664 - PAS/PAC sensor hybrid histidine kinase 2639 58.26 0 3053242..3053907 - 221 26989384 agmR PP_2665 - LuxR family two component transcriptional regulator 2640 63.64 0 3053962..3054522 - 186 26989385 - PP_2666 - hypothetical protein 2641 61.24 0 3054830..3055621 - 263 26989386 - PP_2667 - ABC transporter 2642 67.21 +1 3055618..3056358 - 246 26989387 - PP_2668 - efflux ABC transporter ATP-binding protein 2643 63.54 0 3056355..3057344 - 329 26989388 - PP_2669 - YVTN family beta-propeller repeat-containing protein 2644 66.14 +1 3057324..3058658 + 444 26989389 - PP_2670 - hypothetical protein 2645 66.27 +1 3058719..3059993 + 424 26989390 - PP_2671 - integral membrane sensor signal transduction histidine kinase 2646 64.01 0 3059993..3060631 + 212 26989391 - PP_2672 - LuxR family DNA-binding response regulator 2647 63.79 0 3060837..3061496 - 219 26989392 - PP_2673 - pentapeptide repeat-containing protein 2648 63.55 0 3061563..3063458 - 631 26989393 qedH PP_2674 - quinoprotein ethanol dehydrogenase 2649 65.15 0 3063713..3064174 + 153 26989394 - PP_2675 - cytochrome c-type protein 2650 64.62 0 3064129..3065055 + 308 26989395 - PP_2676 - periplasmic binding protein, putative 2651 66.67 +1 3065058..3065825 + 255 26989396 - PP_2677 - hypothetical protein 2652 64.94 0 3065864..3066787 + 307 26989397 - PP_2678 - beta-lactamase domain protein 2653 63.98 0 3066959..3068746 + 595 26989398 - PP_2679 - quinoprotein ethanol dehydrogenase, putative 2654 62.46 0 3068909..3070429 + 506 26989399 - PP_2680 - aldehyde dehydrogenase family protein 2655 63.37 0 3070783..3071055 + 90 26989400 - PP_2681 - pyrroloquinoline quinone biosynthesis protein PqqD 2656 63.57 0 3071145..3072308 + 387 26989401 - PP_2682 - iron-containing alcohol dehydrogenase 2657 64.55 0 3072259..3073962 + 567 26989402 - PP_2683 - PAS/PAC sensor hybrid histidine kinase 2658 51.34 -2 3074392..3075102 + 236 26989403 - PP_2684 - hypothetical protein 2659 59.61 0 3075327..3076049 - 240 26989404 - PP_2685 - hypothetical protein 2660 65.00 0 3076123..3076902 - 259 26989405 - PP_2686 - transglutaminase-like domain-containing protein 2661 63.09 0 3076899..3077849 - 316 26989406 - PP_2687 - hypothetical protein 2662 62.98 0 3077853..3079262 - 469 26989407 - PP_2688 - hypothetical protein 2663 62.63 0 3079696..3080067 - 123 26989408 - PP_2689 - endoribonuclease, putative 2664 63.96 0 3080095..3080796 - 233 26989409 - PP_2690 - hypothetical protein 2665 63.00 0 3080793..3082511 - 572 26989410 - PP_2691 - hypothetical protein 2666 62.99 0 3082514..3084064 - 516 26989411 - PP_2692 - BCCT family transporter 2667 64.74 0 3084120..3085106 - 328 26989412 - PP_2693 - dipeptidase, putative 2668 65.28 0 3085120..3086562 - 480 26989413 - PP_2694 - aldehyde dehydrogenase family protein 2669 62.10 0 3086649..3087545 + 298 26989414 - PP_2695 - LysR family transcriptional regulator 2670 64.09 0 3087612..3088541 - 309 26989415 metR-2 PP_2696 - transcriptional activator MetR 2671 59.79 0 3088640..3089221 - 193 26989416 - PP_2697 - flavin reductase domain-containing protein 2672 56.71 -1 3089175..3090209 - 344 26989417 metE PP_2698 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2673 53.56 -2 3090236..3091288 - 350 26989418 - PP_2699 - hypothetical protein 2674 60.08 0 3091450..3091950 + 166 26989419 - PP_2700 - redoxin domain protein 2675 59.96 0 3092037..3092975 + 312 26989420 - PP_2701 - LysR family transcriptional regulator 2676 64.37 0 3092952..3094082 - 376 26989421 - PP_2702 - hypothetical protein 2677 62.06 0 3094150..3095757 + 535 26989422 - PP_2703 - major facilitator transporter 2678 61.18 0 3095759..3096943 + 394 26989423 - PP_2704 - M20/M25/M40 family peptidase 2679 58.93 0 3096994..3097329 + 111 26989424 - PP_2705 - hypothetical protein 2680 64.20 0 3097395..3097637 + 80 26989425 - PP_2706 - hypothetical protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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