version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 210 62.77 0 262483..262764 + 93 26986955 - PP_0211 - hypothetical protein 211 62.30 0 263249..264691 + 480 26986956 gabD PP_0213 - succinate-semialdehyde dehydrogenase I 212 62.60 0 264874..266151 + 425 26986957 gabT PP_0214 - 4-aminobutyrate aminotransferase 213 64.84 0 266290..267549 + 419 26986958 - PP_0215 - putative signal transduction protein 214 61.40 0 267640..268626 - 328 26986959 - PP_0216 - diguanylate cyclase with PAS/PAC sensor 215 63.54 0 268768..269952 - 394 26986960 - PP_0217 - fatty acid desaturase 216 63.08 0 270099..271994 + 631 26986961 - PP_0218 - sensory box protein 217 62.17 0 272023..272667 - 214 26986962 - PP_0219 - binding-protein-dependent transport systems inner membrane component 218 64.59 0 272657..273766 - 369 26986963 - PP_0220 - ABC transporter ATP-binding protein 219 60.17 0 273768..274568 - 266 26986964 - PP_0221 - metal ABC transporter periplasmic-binding protein 220 64.50 0 274561..275946 - 461 26986965 - PP_0222 - DszA family monooxygenase 221 66.34 +1 275946..277166 - 406 26986966 - PP_0223 - DszC family monooxygenase 222 65.86 0 277263..278504 - 413 26986967 - PP_0224 - DszC family monooxygenase 223 63.50 0 278818..279576 - 252 26986968 - PP_0225 - putative amino-acid ABC transporter ATP-binding protein YecC 224 63.23 0 279579..280247 - 222 26986969 - PP_0226 - polar amino acid ABC transporter inner membrane subunit 225 59.50 0 280244..281038 - 264 26986970 - PP_0227 - cystine transporter subunit 226 63.43 0 281755..282279 + 174 26986971 - PP_0228 - serine O-acetyltransferase, putative 227 61.82 0 282591..284552 + 653 26986972 - PP_0229 - choline/carnitine/betaine transporter 228 63.55 0 284615..285448 - 277 26986973 tauD PP_0230 - taurine dioxygenase 229 65.95 +1 285497..286336 - 279 26986974 tauC PP_0231 - binding-protein-dependent transport systems inner membrane component 230 65.53 0 286333..287121 - 262 26986975 tauB PP_0232 - taurine transporter ATP-binding subunit 231 63.89 0 287135..288106 - 323 26986976 tauA PP_0233 - taurine ABC transporter, periplasmic binding protein 232 57.60 -1 288581..289915 + 444 26986977 oprE PP_0234 - outer membrane porin 233 59.00 0 290081..290719 + 212 26986978 lsfA PP_0235 - peroxidase 234 62.79 0 290939..291532 + 197 26986979 ssuE PP_0236 - NAD(P)H-dependent FMN reductase 235 65.22 0 291618..292583 + 321 26986980 ssuA PP_0237 - aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 236 64.23 0 292643..293791 + 382 26986981 ssuD PP_0238 - alkanesulfonate monooxygenase 237 62.53 0 293802..294599 + 265 26986982 ssuC PP_0239 - binding-protein-dependent transport systems inner membrane component 238 68.14 +1 294596..295408 + 270 26986983 ssuB PP_0240 - aliphatic sulfonates transport ATP-binding subunit 239 52.78 -2 295436..295651 + 71 26986984 ssuF PP_0241 - TOBE domain protein 240 62.24 0 295793..296425 - 210 26986985 - PP_0242 - TetR family transcriptional regulator 241 62.99 0 296425..298002 - 525 26986986 gshA PP_0243 - glutamate--cysteine ligase 242 64.84 0 298156..298539 - 127 26986987 - PP_0244 - thioesterase superfamily protein 243 63.61 0 298539..301124 - 861 26986988 - PP_0245 - S1 RNA-binding domain-containing protein 244 64.78 0 301081..301821 + 246 26986989 ompR PP_0246 - osmolarity response regulator 245 63.47 0 301835..303148 + 437 26986990 envZ PP_0247 - integral membrane sensor signal transduction histidine kinase 246 61.92 0 303246..304151 - 301 26986991 rimK PP_0248 - alpha-L-glutamate ligase, RimK family 247 60.87 0 304148..304768 - 206 26986992 - PP_0249 - hypothetical protein 248 63.93 0 304740..305141 + 133 26986993 hslR PP_0250 - RNA-binding S4 domain protein 249 61.13 0 305170..305964 - 264 26986994 - PP_0251 - hypothetical protein 250 61.22 0 306085..306984 + 299 26986995 hslO PP_0252 - Hsp33-like chaperonin 251 65.08 0 308852..309292 + 146 26986996 - PP_0254 - thioesterase superfamily protein 252 66.46 +1 309349..309831 - 160 26986997 - PP_0255 - 17 kDa surface antigen 253 64.32 0 310028..312373 - 781 26986998 - PP_0256 - molybdopterin oxidoreductase, alpha subunit 254 65.46 0 312379..313209 - 276 26986999 - PP_0257 - formate dehydrogenase family accessory protein FdhD 255 56.46 -1 313385..313825 + 146 26987000 - PP_0258 - hypothetical protein 256 61.24 0 313876..314538 - 220 26987001 - PP_0259 - HAD superfamily hydrolase 257 65.08 0 314603..315169 + 188 26987002 nudE PP_0260 - ADP-ribose diphosphatase NudE 258 64.42 0 315184..315984 + 266 26987003 cysQ PP_0261 - 3'(2'),5'-bisphosphate nucleotidase 259 64.04 0 316067..316522 - 151 26987004 - PP_0262 - hypothetical protein 260 65.60 0 316522..317928 - 468 26987005 - PP_0263 - two component, sigma54 specific, transcriptional regulator, Fis family 261 65.45 0 317925..319739 - 604 26987006 - PP_0264 - sensor histidine kinase 262 59.52 0 319782..320327 - 181 26987007 - PP_0265 - dTDP-4-dehydrorhamnose 3,5-epimerase 263 63.32 0 320605..321711 + 368 26987008 - PP_0266 - agmatine deiminase 264 62.46 0 322169..324238 - 689 26987009 - PP_0267 - TonB-dependent siderophore receptor 265 60.00 0 324713..326032 + 439 26987010 oprQ PP_0268 - outer membrane porin 266 62.89 0 326063..327730 - 555 26987011 - PP_0269 - glutamate synthase, large subunit, putative 267 65.35 0 327880..329247 - 455 26987012 - PP_0270 - integral membrane sensor signal transduction histidine kinase 268 64.17 0 329249..329968 - 239 26987013 gltR-1 PP_0271 - winged helix family two component transcriptional regulator 269 63.53 0 330109..332406 + 765 26987014 - PP_0272 - TonB-dependent siderophore receptor 270 61.03 0 332472..332684 - 70 26987015 - PP_0273 - hypothetical protein 271 55.56 -1 333189..333728 + 179 26987016 - PP_0274 - helix-turn-helix domain-containing protein 272 54.17 -1 334148..334363 + 71 26987017 - PP_0275 - hypothetical protein 273 52.78 -2 334360..334683 - 107 26987018 - PP_0276 - Cro/CI family transcriptional regulator 274 67.87 +1 335145..335393 - 82 26987019 - PP_0277 - hypothetical protein 275 58.23 0 335914..336150 + 78 26987020 - PP_0278 - hypothetical protein 276 66.42 +1 336543..337748 - 401 26987021 - PP_0279 - hypothetical protein 277 62.75 0 337877..338566 - 229 26987022 - PP_0280 - polar amino acid ABC transporter inner membrane subunit 278 62.19 0 338566..339258 - 230 26987023 - PP_0281 - polar amino acid ABC transporter inner membrane subunit 279 55.51 -1 339313..340065 - 250 26987024 - PP_0282 - amino acid ABC transporter, periplasmic amino acid-binding protein 280 61.24 0 340077..340850 - 257 26987025 - PP_0283 - amino acid ABC transporter ATP-binding protein 281 63.13 0 341482..342867 + 461 26987026 - PP_0284 - GABA permease 282 58.61 0 344264..344536 - 90 26987027 - PP_0285 - hypothetical protein 283 66.76 +1 344533..345600 - 355 26987028 mutY PP_0286 - A/G-specific adenine glycosylase 284 63.77 0 345597..347843 - 748 26987029 - PP_0287 - AsmA family protein 285 63.48 0 348112..349773 + 553 26987030 - PP_0288 - major facilitator superfamily MFS_1 286 58.29 0 349953..350585 + 210 26987031 hisB PP_0289 - imidazoleglycerol-phosphate dehydratase 287 62.91 0 350586..351224 + 212 26987032 hisH PP_0290 - imidazole glycerol phosphate synthase subunit HisH 288 59.77 0 351225..351485 + 86 26987033 - PP_0291 - hypothetical protein 289 63.28 0 351513..352250 + 245 26987034 hisA PP_0292 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 290 63.68 0 352261..353031 + 256 26987035 hisF PP_0293 - imidazole glycerol phosphate synthase subunit HisF 291 61.32 0 353149..354327 - 392 26987036 - PP_0294 - glycine betaine/L-proline ABC transporter, ATP-binding subunit 292 60.99 0 354324..355169 - 281 26987037 - PP_0295 - glycine betaine/L-proline ABC transporter, permease protein 293 58.86 0 355254..356201 - 315 26987038 - PP_0296 - glycine betaine/L-proline ABC transporter, periplasmic binding protein 294 63.47 0 356654..358030 + 458 26987039 sda-1 PP_0297 - L-serine dehydratase, iron-sulfur-dependent, single chain form 295 62.33 0 358532..359638 + 368 26987040 - PP_0298 - AraC family transcriptional regulator 296 59.04 0 359758..360216 - 152 26987041 - PP_0299 - hypothetical protein 297 49.15 -2 360348..361934 + 528 26987042 - PP_0300 - metallopeptidase, putative 298 59.45 0 362034..362504 - 156 26987043 - PP_0301 - hypothetical protein 299 63.56 0 362515..363480 - 321 26987044 - PP_0302 - 3-hydroxybutyryl-CoA dehydrogenase 300 65.76 0 363647..364531 - 294 26987045 - PP_0303 - hypothetical protein 301 63.36 0 364655..365623 - 322 26987046 - PP_0304 - hypothetical protein 302 61.35 0 365732..366691 + 319 26987047 - PP_0305 - AraC family transcriptional regulator 303 56.52 -1 367386..368114 - 242 26987048 - PP_0306 - hypothetical protein 304 59.03 0 368217..368648 - 143 26987049 - PP_0307 - hypothetical protein 305 60.43 0 368919..369896 + 325 26987050 - PP_0308 - membrane dipeptidase 306 58.95 0 369972..370502 + 176 26987051 - PP_0309 - hypothetical protein 307 62.20 0 370518..372578 + 686 26987052 - PP_0310 - oxidoreductase, FMN-binding 308 63.65 0 372757..374709 + 650 26987053 - PP_0311 - iron-sulfur cluster-binding protein 309 66.67 +1 374955..375941 + 328 26987054 - PP_0312 - electron transfer flavoprotein, alpha subunit 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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