version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 165 60.49 0 189994..191370 - 458 26986910 - PP_0166 - HlyD family type I secretion membrane fusion protein 166 63.19 0 191360..193516 - 718 26986911 - PP_0167 - toxin secretion ATP-binding protein 167 61.03 0 194494..220542 + 8682 26986912 - PP_0168 - surface adhesion protein, putative 168 61.00 0 221228..222127 + 299 26986913 - PP_0169 - TauD/TfdA family dioxygenase 169 61.76 0 222145..223164 + 339 26986914 - PP_0170 - ABC transporter, periplasmic binding protein 170 61.00 0 223171..224034 + 287 26986915 - PP_0171 - ABC transporter ATP-binding protein 171 59.84 0 224049..224912 + 287 26986916 - PP_0172 - binding-protein-dependent transport systems inner membrane component 172 61.11 0 225030..225659 - 209 26986917 - PP_0173 - transcriptional factor-related protein 173 63.49 0 225774..226592 + 272 26986918 - PP_0174 - Sel1 domain protein repeat-containing protein 174 67.11 +1 226725..227177 + 150 26986919 - PP_0175 - MarR family transcriptional regulator 175 64.70 0 227174..229261 + 695 26986920 - PP_0176 - fusaric acid resistance protein region 176 59.15 0 229258..229470 + 70 26986921 - PP_0177 - hypothetical protein 177 64.27 0 229467..230342 + 291 26986922 - PP_0178 - secretion protein HlyD family protein 178 65.05 0 230339..231757 + 472 26986923 - PP_0179 - RND efflux transporter 179 65.52 0 231901..233811 + 636 26986924 - PP_0180 - cytochrome c family protein 180 57.32 -1 233874..234119 - 81 26986925 - PP_0181 - hypothetical protein 181 58.75 0 234189..234491 - 100 26986926 - PP_0182 - hypothetical protein 182 60.03 0 234640..235302 + 220 26986927 - PP_0183 - glutathione S-transferase family protein 183 62.97 0 235427..236833 - 468 26986928 argH PP_0184 - argininosuccinate lyase 184 61.83 0 237119..237862 + 247 26986929 pprA PP_0185 - LytTR family two component transcriptional regulator 185 65.29 0 237981..238922 + 313 26986930 hemC PP_0186 - porphobilinogen deaminase 186 65.89 +1 238919..239686 + 255 26986931 hemD PP_0187 - uroporphyrinogen-III synthase 187 64.63 0 239705..240832 + 375 26986932 - PP_0188 - uroporphyrin-III C-methyltransferase, putative 188 66.02 +1 240829..242067 + 412 26986933 hemY PP_0189 - HemY domain protein 189 62.92 0 242290..242796 + 168 26986934 - PP_0190 - disulphide bond formation protein DsbB 190 58.81 0 243028..243498 + 156 26986935 pfrA PP_0191 - anti-RNA polymerase sigma 70 factor 191 59.28 0 243507..244169 - 220 26986936 fkl PP_0192 - peptidyl-prolyl cis-trans isomerase FklB 192 52.94 -2 244185..244286 - 33 26986937 - PP_0193 - hypothetical protein 193 64.14 0 244324..245313 + 329 26986938 algP PP_0194 - alginate regulatory protein AlgP 194 64.58 0 245292..245771 - 159 26986939 - PP_0195 - hypothetical protein 195 64.42 0 245822..247732 + 636 26986940 - PP_0196 - ABC transporter ATP-binding protein 196 63.95 0 247732..248319 + 195 26986941 - PP_0197 - hypothetical protein 197 62.40 0 248419..249051 + 210 26986942 - PP_0198 - amino acid transporter LysE 198 60.24 0 249100..249846 - 248 26986943 - PP_0199 - SPFH domain-containing protein/band 7 family protein 199 66.52 +1 249855..251201 - 448 26986944 - PP_0200 - hypothetical protein 200 61.59 0 251267..251758 + 163 26986945 - PP_0201 - YbaK/prolyl-tRNA synthetase associated region 201 60.50 0 252777..253214 - 145 26986946 - PP_0202 - CBS domain-containing protein 202 60.72 0 253385..255115 - 576 26986947 - PP_0203 - hypothetical protein 203 62.00 0 255568..256317 + 249 26986948 - PP_0204 - GntR family transcriptional regulator 204 62.84 0 256314..258038 + 574 26986949 - PP_0205 - putative oxidoreductase 205 59.76 0 258101..258346 + 81 26986950 - PP_0206 - ferredoxin, 4Fe-4S 206 64.32 0 258466..259872 + 468 26986951 - PP_0207 - nitrate ABC transporter, periplasmic nitrate-binding protein, putative 207 65.52 0 259888..260670 + 260 26986952 - PP_0208 - nitrate ABC transporter, permease protein, putative 208 66.55 +1 260670..261521 + 283 26986953 - PP_0209 - nitrate ABC transporter, ATP-binding protein, putative 209 68.74 +1 261518..262483 + 321 26986954 - PP_0210 - phycobiliprotein, putative 210 62.77 0 262483..262764 + 93 26986955 - PP_0211 - hypothetical protein 211 62.30 0 263249..264691 + 480 26986956 gabD PP_0213 - succinate-semialdehyde dehydrogenase I 212 62.60 0 264874..266151 + 425 26986957 gabT PP_0214 - 4-aminobutyrate aminotransferase 213 64.84 0 266290..267549 + 419 26986958 - PP_0215 - putative signal transduction protein 214 61.40 0 267640..268626 - 328 26986959 - PP_0216 - diguanylate cyclase with PAS/PAC sensor 215 63.54 0 268768..269952 - 394 26986960 - PP_0217 - fatty acid desaturase 216 63.08 0 270099..271994 + 631 26986961 - PP_0218 - sensory box protein 217 62.17 0 272023..272667 - 214 26986962 - PP_0219 - binding-protein-dependent transport systems inner membrane component 218 64.59 0 272657..273766 - 369 26986963 - PP_0220 - ABC transporter ATP-binding protein 219 60.17 0 273768..274568 - 266 26986964 - PP_0221 - metal ABC transporter periplasmic-binding protein 220 64.50 0 274561..275946 - 461 26986965 - PP_0222 - DszA family monooxygenase 221 66.34 +1 275946..277166 - 406 26986966 - PP_0223 - DszC family monooxygenase 222 65.86 0 277263..278504 - 413 26986967 - PP_0224 - DszC family monooxygenase 223 63.50 0 278818..279576 - 252 26986968 - PP_0225 - putative amino-acid ABC transporter ATP-binding protein YecC 224 63.23 0 279579..280247 - 222 26986969 - PP_0226 - polar amino acid ABC transporter inner membrane subunit 225 59.50 0 280244..281038 - 264 26986970 - PP_0227 - cystine transporter subunit 226 63.43 0 281755..282279 + 174 26986971 - PP_0228 - serine O-acetyltransferase, putative 227 61.82 0 282591..284552 + 653 26986972 - PP_0229 - choline/carnitine/betaine transporter 228 63.55 0 284615..285448 - 277 26986973 tauD PP_0230 - taurine dioxygenase 229 65.95 +1 285497..286336 - 279 26986974 tauC PP_0231 - binding-protein-dependent transport systems inner membrane component 230 65.53 0 286333..287121 - 262 26986975 tauB PP_0232 - taurine transporter ATP-binding subunit 231 63.89 0 287135..288106 - 323 26986976 tauA PP_0233 - taurine ABC transporter, periplasmic binding protein 232 57.60 -1 288581..289915 + 444 26986977 oprE PP_0234 - outer membrane porin 233 59.00 0 290081..290719 + 212 26986978 lsfA PP_0235 - peroxidase 234 62.79 0 290939..291532 + 197 26986979 ssuE PP_0236 - NAD(P)H-dependent FMN reductase 235 65.22 0 291618..292583 + 321 26986980 ssuA PP_0237 - aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 236 64.23 0 292643..293791 + 382 26986981 ssuD PP_0238 - alkanesulfonate monooxygenase 237 62.53 0 293802..294599 + 265 26986982 ssuC PP_0239 - binding-protein-dependent transport systems inner membrane component 238 68.14 +1 294596..295408 + 270 26986983 ssuB PP_0240 - aliphatic sulfonates transport ATP-binding subunit 239 52.78 -2 295436..295651 + 71 26986984 ssuF PP_0241 - TOBE domain protein 240 62.24 0 295793..296425 - 210 26986985 - PP_0242 - TetR family transcriptional regulator 241 62.99 0 296425..298002 - 525 26986986 gshA PP_0243 - glutamate--cysteine ligase 242 64.84 0 298156..298539 - 127 26986987 - PP_0244 - thioesterase superfamily protein 243 63.61 0 298539..301124 - 861 26986988 - PP_0245 - S1 RNA-binding domain-containing protein 244 64.78 0 301081..301821 + 246 26986989 ompR PP_0246 - osmolarity response regulator 245 63.47 0 301835..303148 + 437 26986990 envZ PP_0247 - integral membrane sensor signal transduction histidine kinase 246 61.92 0 303246..304151 - 301 26986991 rimK PP_0248 - alpha-L-glutamate ligase, RimK family 247 60.87 0 304148..304768 - 206 26986992 - PP_0249 - hypothetical protein 248 63.93 0 304740..305141 + 133 26986993 hslR PP_0250 - RNA-binding S4 domain protein 249 61.13 0 305170..305964 - 264 26986994 - PP_0251 - hypothetical protein 250 61.22 0 306085..306984 + 299 26986995 hslO PP_0252 - Hsp33-like chaperonin 251 65.08 0 308852..309292 + 146 26986996 - PP_0254 - thioesterase superfamily protein 252 66.46 +1 309349..309831 - 160 26986997 - PP_0255 - 17 kDa surface antigen 253 64.32 0 310028..312373 - 781 26986998 - PP_0256 - molybdopterin oxidoreductase, alpha subunit 254 65.46 0 312379..313209 - 276 26986999 - PP_0257 - formate dehydrogenase family accessory protein FdhD 255 56.46 -1 313385..313825 + 146 26987000 - PP_0258 - hypothetical protein 256 61.24 0 313876..314538 - 220 26987001 - PP_0259 - HAD superfamily hydrolase 257 65.08 0 314603..315169 + 188 26987002 nudE PP_0260 - ADP-ribose diphosphatase NudE 258 64.42 0 315184..315984 + 266 26987003 cysQ PP_0261 - 3'(2'),5'-bisphosphate nucleotidase 259 64.04 0 316067..316522 - 151 26987004 - PP_0262 - hypothetical protein 260 65.60 0 316522..317928 - 468 26987005 - PP_0263 - two component, sigma54 specific, transcriptional regulator, Fis family 261 65.45 0 317925..319739 - 604 26987006 - PP_0264 - sensor histidine kinase 262 59.52 0 319782..320327 - 181 26987007 - PP_0265 - dTDP-4-dehydrorhamnose 3,5-epimerase 263 63.32 0 320605..321711 + 368 26987008 - PP_0266 - agmatine deiminase 264 62.46 0 322169..324238 - 689 26987009 - PP_0267 - TonB-dependent siderophore receptor 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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