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Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2047 63.64 0 2351747..2353330 - 527 26988792 - PP_2067 - EmrB/QacA family drug resistance transporter 2048 66.82 +1 2353251..2354528 - 425 26988793 - PP_2068 - multidrug efflux MFS membrane fusion protein, putative 2049 67.51 +1 2354586..2356007 - 473 26988794 - PP_2069 - multidrug efflux MFS outer membrane protein, putative 2050 66.53 +1 2356108..2356818 - 236 26988795 - PP_2070 - AraC family transcriptional regulator 2051 59.43 0 2356988..2357374 - 128 26988796 - PP_2071 - hypothetical protein 2052 64.61 0 2357483..2358307 - 274 26988797 - PP_2072 - AraC family transcriptional regulator 2053 61.24 0 2358327..2358842 - 171 26988798 - PP_2073 - acetyltransferase 2054 63.85 0 2359040..2359963 + 307 26988799 - PP_2074 - LysR family transcriptional regulator 2055 55.73 -1 2360020..2361153 - 377 26988800 - PP_2075 - hypothetical protein 2056 60.46 0 2361150..2363873 - 907 26988801 - PP_2076 - hypothetical protein 2057 66.18 +1 2364206..2365438 - 410 26988802 lysA-1 PP_2077 - diaminopimelate decarboxylase 2058 64.24 0 2365562..2366467 + 301 26988803 - PP_2078 - DNA-binding transcriptional regulator LysR 2059 57.30 -1 2366551..2367009 - 152 26988804 - PP_2079 - hypothetical protein 2060 63.74 0 2367054..2372045 + 1663 26988805 - PP_2080 - NAD-glutamate dehydrogenase 2061 55.92 -1 2372157..2372975 - 272 26988806 - PP_2081 - hypothetical protein 2062 63.22 0 2373167..2375542 + 791 26988807 ppsA PP_2082 - phosphoenolpyruvate synthase 2063 64.75 0 2375644..2376636 + 330 26988808 - PP_2083 - lipase, putative 2064 59.35 0 2376841..2377332 + 163 26988809 menG PP_2084 - ribonuclease activity regulator protein RraA 2065 63.96 0 2377357..2378355 + 332 26988810 cmaX PP_2085 - cmaX protein 2066 63.37 0 2378443..2378715 + 90 26988811 crfX PP_2086 - hypothetical protein 2067 61.33 0 2378718..2379542 + 274 26988812 cmpX PP_2087 - TM helix repeat-containing protein 2068 55.50 -1 2379632..2380222 + 196 26988813 sigX PP_2088 - RNA polymerase sigma factor SigX 2069 58.65 0 2380334..2381368 + 344 26988814 oprF PP_2089 - OmpF family protein 2070 65.18 0 2381455..2382195 - 246 26988815 cobA-1 PP_2090 - uroporphyrin-III C-methyltransferase 2071 67.03 +1 2382223..2383893 - 556 26988816 - PP_2091 - serine/threonine-protein kinase, putative 2072 66.18 +1 2383903..2385138 - 411 26988817 nasA PP_2092 - nitrite transporter 2073 62.33 0 2385299..2385874 - 191 26988818 nasT PP_2093 - response regulator receiver and ANTAR domain protein 2074 67.08 +1 2385886..2387100 - 404 26988819 - PP_2094 - nitrate-binding protein NasS, putative 2075 64.71 0 2387238..2388260 + 340 26988820 pyrD PP_2095 - dihydroorotate dehydrogenase 2 2076 64.30 0 2389137..2391374 + 745 26988821 - PP_2096 - 23S rRNA m(2)G2445 methyltransferase 2077 65.13 0 2391469..2393871 + 800 26988822 - PP_2097 - diguanylate cyclase with PAS/PAC sensor 2078 62.70 0 2393977..2395389 - 470 26988823 dacB PP_2098 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2079 57.39 -1 2395632..2395976 - 114 26988824 - PP_2099 - hypothetical protein 2080 64.19 0 2396018..2399653 - 1211 26988825 - PP_2100 - two-component sensor protein 2081 54.65 -1 2399656..2400279 - 207 26988826 - PP_2101 - LuxR family DNA-binding response regulator 2082 63.96 0 2400554..2401885 - 443 26988827 - PP_2102 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 2083 64.24 0 2402034..2402363 - 109 26988828 - PP_2103 - hypothetical protein 2084 64.27 0 2402360..2402734 - 124 26988829 - PP_2104 - hypothetical protein 2085 64.44 0 2402744..2403058 - 104 26988830 - PP_2105 - hypothetical protein 2086 63.69 0 2403371..2404579 + 402 26988831 - PP_2106 - Rh family protein/ammonium transporter 2087 59.58 0 2404653..2404892 + 79 26988832 - PP_2107 - glutaredoxin 2 2088 61.57 0 2405001..2405432 + 143 26988833 - PP_2108 - peptidase M15A 2089 62.46 0 2405498..2405806 + 102 26988834 - PP_2109 - hypothetical protein 2090 63.60 0 2406996..2408561 - 521 26988835 aer-2 PP_2111 - aerotaxis receptor Aer-2 2091 64.15 0 2408703..2411444 - 913 26988836 acnA PP_2112 - aconitate hydratase 2092 62.63 0 2411669..2412733 + 354 26988837 - PP_2113 - putative RNA 2'-O-ribose methyltransferase 2093 57.45 -1 2413154..2414455 + 433 26988838 - PP_2114 - ISPpu8, transposase 2094 50.51 -2 2414800..2414997 + 65 26988839 - PP_2115 - hypothetical protein 2095 64.20 0 2415019..2415261 + 80 26988840 - PP_2116 - cell developmental protein SirA 2096 66.14 +1 2415322..2416464 + 380 26988841 pdxB PP_2117 - erythronate-4-phosphate dehydrogenase 2097 57.58 -1 2416579..2416776 - 65 26988842 - PP_2118 - hypothetical protein 2098 64.12 0 2416963..2418726 + 587 26988843 - PP_2119 - lipid ABC transporter ATPase/inner membrane protein 2099 63.85 0 2418847..2420514 + 555 26988844 - PP_2120 - methyl-accepting chemotaxis sensory transducer 2100 57.66 -1 2420778..2420999 - 73 26988845 - PP_2121 - putative lipoprotein 2101 64.44 0 2421187..2421726 + 179 26988846 moaB-1 PP_2122 - molybdenum cofactor biosynthesis protein B 2102 67.73 +1 2421710..2422936 + 408 26988847 moeA PP_2123 - molybdopterin biosynthesis MoeA protein 2103 64.10 0 2422925..2424172 - 415 26988848 - PP_2124 - glycosyl transferase, putative 2104 64.75 0 2424429..2425316 + 295 161378132 - PP_2125 - lipid kinase 2105 63.03 0 2425300..2425959 - 219 26988850 - PP_2126 - LuxR family DNA-binding response regulator 2106 65.71 0 2425949..2426890 - 313 26988851 - PP_2127 - sensor histidine kinase 2107 61.65 0 2428073..2429008 + 311 26988852 chev-2 PP_2128 - chemotaxis protein CheV 2108 63.06 0 2429064..2429867 + 267 26988853 - PP_2129 - MOSC domain containing protein 2109 64.49 0 2429980..2431953 - 657 26988854 - PP_2130 - soluble lytic transglycosylase, putative 2110 63.45 0 2432126..2434054 + 642 26988855 - PP_2131 - ABC transporter ATP-binding protein 2111 61.22 0 2434162..2434602 - 146 26988856 - PP_2132 - universal stress protein 2112 61.94 0 2434686..2435150 + 154 26988857 - PP_2133 - hypothetical protein 2113 57.56 -1 2435454..2436419 + 321 26988858 - PP_2134 - ISPpu10, transposase 2114 58.12 0 2436589..2436705 - 38 26988859 - PP_2135 - hypothetical protein 2115 61.92 0 2437078..2439225 + 715 26988860 fadB PP_2136 - multifunctional fatty acid oxidation complex subunit alpha 2116 62.16 0 2439257..2440432 + 391 26988861 fadA PP_2137 - 3-ketoacyl-CoA thiolase 2117 56.75 -1 2440508..2440759 + 83 26988862 - PP_2138 - hypothetical protein 2118 61.69 0 2440860..2443469 + 869 26988863 topA PP_2139 - DNA topoisomerase I 2119 58.92 0 2443482..2444075 + 197 26988864 - PP_2140 - hypothetical protein 2120 59.40 0 2444126..2444359 + 77 26988865 - PP_2141 - hypothetical protein 2121 65.41 0 2444410..2444886 - 158 26988866 - PP_2142 - cell division inhibitor-related protein 2122 62.56 0 2444900..2445508 - 202 26988867 lexA-1 PP_2143 - LexA repressor 2123 63.42 0 2445724..2446431 + 235 26988868 - PP_2144 - TetR family transcriptional regulator 2124 65.68 0 2446609..2447619 + 336 26988869 nagZ PP_2145 - beta-hexosaminidase 2125 64.27 0 2447762..2449762 - 666 26988870 - PP_2146 - Snf2/Rad54 family helicase 2126 64.05 0 2451084..2451656 - 190 26988871 - PP_2147 - hypothetical protein 2127 65.19 0 2451666..2455115 - 1149 26988872 mfd PP_2148 - transcription-repair coupling factor 2128 61.00 0 2455283..2456746 + 487 26988873 gap-2 PP_2149 - glyceraldehyde-3-phosphate dehydrogenase 2129 63.66 0 2456927..2457925 + 332 26988874 - PP_2150 - ApbE family lipoprotein 2130 61.29 0 2458130..2459524 + 464 26988875 sthA PP_2151 - soluble pyridine nucleotide transhydrogenase 2131 63.04 0 2459573..2460289 - 238 26988876 - PP_2152 - glycerophosphoryl diester phosphodiesterase 2132 61.88 0 2460321..2460905 - 194 26988877 - PP_2153 - type IV pilus assembly PilZ 2133 63.15 0 2460999..2462249 + 416 26988878 lolC PP_2154 - lipoprotein releasing system, transmembrane protein, LolC/E family 2134 66.67 +1 2462242..2462940 + 232 26988879 lolD PP_2155 - lipoprotein releasing system, ATP-binding protein 2135 62.32 0 2463001..2464242 + 413 26988880 lolE PP_2156 - lipoprotein releasing system, transmembrane protein, LolC/E family 2136 66.44 +1 2464282..2465634 - 450 26988881 - PP_2157 - heavy metal sensor signal transduction histidine kinase 2137 66.37 +1 2465631..2466311 - 226 26988882 - PP_2158 - two component heavy metal response transcriptional regulator 2138 60.80 0 2466512..2467039 + 175 26988883 - PP_2159 - plastocyanin/azurin family copper binding protein 2139 62.21 0 2467108..2467938 + 276 26988884 queF PP_2160 - 7-cyano-7-deazaguanine reductase 2140 62.50 0 2467970..2468233 - 87 26988885 - PP_2161 - hypothetical protein 2141 66.84 +1 2468356..2468919 - 187 26988886 - PP_2162 - hypothetical protein 2142 60.73 0 2469121..2469828 + 235 26988887 vacJ PP_2163 - VacJ family lipoprotein 2143 62.33 0 2469863..2470162 - 99 26988888 - PP_2164 - type IV pilus assembly PilZ 2144 61.17 0 2470433..2471614 + 393 26988889 - PP_2165 - response regulator 2145 56.73 -1 2471611..2472093 + 160 26988890 - PP_2166 - anti-sigma-factor antagonist 2146 64.45 0 2472242..2474092 - 616 26988891 - PP_2167 - hypothetical protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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