version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1783 59.68 0 2020045..2021460 + 471 26988528 - PP_1798 - outer membrane efflux protein 1784 57.49 -1 2021899..2022966 + 355 26988529 gmd PP_1799 - GDP-mannose 4,6 dehydratase 1785 60.31 0 2022966..2023862 + 298 26988530 rmd PP_1800 - oxidoreductase Rmd 1786 60.45 0 2023859..2025001 + 380 26988531 wbpY PP_1801 - glycosyl transferase WbpY 1787 56.95 -1 2024893..2026107 + 404 26988532 wbpZ PP_1802 - glycosyl transferase WbpZ 1788 62.86 0 2026240..2027211 + 323 26988533 wbpV PP_1803 - UDP-sugar epimerase 1789 60.90 0 2027208..2028212 + 334 26988534 wbpL PP_1804 - glycosyl transferase WbpL 1790 56.85 -1 2028258..2030324 + 688 26988535 wbpM PP_1805 - polysaccharide biosynthesis protein CapD 1791 52.94 -2 2030371..2031324 + 317 26988536 - PP_1806 - KpsF/GutQ family protein 1792 55.16 -1 2031399..2032241 - 280 26988537 kdsA-2 PP_1807 - 2-dehydro-3-deoxyphosphooctonate aldolase 1793 61.20 0 2032517..2034181 + 554 26988538 pgi PP_1808 - glucose-6-phosphate isomerase 1794 52.38 -2 2035254..2035358 + 34 26988539 - PP_1809 - hypothetical protein 1795 57.62 -1 2036663..2037403 + 246 26988540 - PP_1810 - hypothetical protein 1796 63.69 0 2038334..2039476 - 380 26988541 wecB PP_1811 - UDP-N-acetylglucosamine 2-epimerase 1797 63.18 0 2039598..2039798 - 66 26988542 - PP_1812 - hypothetical protein 1798 61.95 0 2039896..2040234 + 112 26988543 - PP_1813 - competence protein ComEA helix-hairpin-helix repeat protein 1799 58.93 0 2040271..2040438 - 55 26988544 - PP_1814 - hypothetical protein 1800 65.53 0 2040622..2041323 + 233 26988545 pyrF PP_1815 - orotidine 5'-phosphate decarboxylase 1801 62.18 0 2041551..2042552 - 333 26988546 - PP_1816 - alcohol dehydrogenase, zinc-containing 1802 66.40 +1 2042730..2043491 + 253 26988547 - PP_1817 - short chain dehydrogenase 1803 54.17 -1 2043635..2044378 - 247 26988548 - PP_1818 - hypothetical protein 1804 65.84 0 2044784..2046724 + 646 26988549 - PP_1819 - methyl-accepting chemotaxis sensory transducer 1805 65.66 0 2046821..2048017 - 398 26988550 - PP_1820 - benzoate transporter 1806 60.86 0 2048156..2048758 + 200 26988551 - PP_1821 - glutathione S-transferase family protein 1807 65.05 0 2048897..2049268 - 123 26988552 - PP_1822 - glutaredoxin 1808 58.12 0 2049328..2049900 - 190 26988553 folE PP_1823 - GTP cyclohydrolase I 1809 64.35 0 2049944..2050504 - 186 26988554 - PP_1824 - Smr domain-containing protein 1810 66.67 +1 2050679..2050999 - 106 26988555 - PP_1825 - hypothetical protein 1811 61.25 0 2051085..2051675 - 196 26988556 - PP_1826 - isochorismatase superfamily hydrolase 1812 64.80 0 2051857..2052765 + 302 26988557 - PP_1827 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1813 64.37 0 2052815..2053597 - 260 26988558 - PP_1828 - hypothetical protein 1814 68.75 +1 2053663..2054622 - 319 26988559 - PP_1829 - alpha/beta fold family hydrolase 1815 64.93 0 2054857..2055948 + 363 26988560 aroC PP_1830 - chorismate synthase 1816 66.15 +1 2056091..2057245 + 384 26988561 - PP_1831 - major facilitator superfamily MFS_1 1817 64.43 0 2057245..2057781 + 178 26988562 - PP_1832 - oxidase, putative 1818 59.08 0 2057909..2058211 - 100 26988563 - PP_1833 - hypothetical protein 1819 67.43 +1 2058448..2058972 + 174 26988564 - PP_1834 - ankyrin domain-containing protein 1820 60.64 0 2059033..2059563 + 176 26988565 - PP_1835 - hypothetical protein 1821 66.40 +1 2059687..2060439 - 250 26988566 - PP_1836 - hypothetical protein 1822 59.38 0 2060752..2060943 + 63 26988567 - PP_1837 - hypothetical protein 1823 62.44 0 2061083..2063140 + 685 26988568 - PP_1838 - hypothetical protein 1824 58.02 0 2063191..2063583 + 130 26988569 - PP_1839 - hypothetical protein 1825 61.86 0 2063761..2064093 + 110 26988570 - PP_1840 - hypothetical protein 1826 64.67 0 2064194..2064994 - 266 26988571 - PP_1841 - cytochrome c family protein 1827 60.82 0 2065524..2066258 + 244 26988572 - PP_1842 - amidotransferase 1828 60.80 0 2066299..2067270 - 323 26988573 - PP_1843 - Mg2+/Co2+ transporter 1829 62.89 0 2067339..2068052 - 237 26988574 plsC PP_1844 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 1830 64.06 0 2068173..2068862 - 229 26988575 - PP_1845 - enoyl-CoA hydratase 1831 60.20 0 2069624..2071045 + 473 26988576 - PP_1846 - group II intron-encoding maturase 1832 63.93 0 2071272..2073461 - 729 26988577 - PP_1847 - TonB-dependent siderophore receptor 1833 59.65 0 2073464..2073577 - 37 26988578 - PP_1848 - hypothetical protein 1834 62.47 0 2073605..2073985 - 126 26988579 - PP_1849 - hypothetical protein 1835 66.33 +1 2074188..2075375 - 395 26988580 - PP_1850 - major facilitator superfamily MFS_1 1836 65.72 0 2075455..2076405 - 316 26988581 - PP_1851 - hypothetical protein 1837 63.60 0 2076406..2077155 - 249 26988582 fabG PP_1852 - 3-ketoacyl-(acyl-carrier-protein) reductase 1838 65.39 0 2077274..2078212 + 312 26988583 - PP_1853 - LysR family transcriptional regulator 1839 64.76 0 2078327..2078797 - 156 26988584 - PP_1854 - hypothetical protein 1840 62.16 0 2078800..2079198 - 132 26988585 - PP_1855 - hypothetical protein 1841 60.95 0 2079177..2079281 - 34 26988586 - PP_1856 - hypothetical protein 1842 64.81 0 2079328..2080461 + 377 26988587 - PP_1857 - hypothetical protein 1843 55.44 -1 2080510..2081079 + 189 26988588 efp PP_1858 - elongation factor P 1844 63.64 0 2081194..2081622 - 142 26988589 ohr PP_1859 - OsmC family protein 1845 61.84 0 2081763..2082218 - 151 26988590 - PP_1860 - MarR family transcriptional regulator 1846 67.82 +1 2082277..2083230 - 317 26988591 - PP_1861 - LysR family transcriptional regulator 1847 64.00 0 2083344..2084093 + 249 26988592 - PP_1862 - hypothetical protein 1848 62.21 0 2084122..2084973 - 283 26988593 - PP_1863 - LysR family transcriptional regulator 1849 59.48 0 2085136..2085288 + 50 26988594 - PP_1864 - hypothetical protein 1850 57.45 -1 2085883..2087184 + 433 26988595 - PP_1865 - ISPpu8, transposase 1851 62.81 0 2088102..2089448 - 448 26988596 - PP_1866 - phospho-2-dehydro-3-deoxyheptonate aldolase 1852 65.08 0 2089565..2090320 + 251 26988597 - PP_1867 - hypothetical protein 1853 64.35 0 2090672..2092351 + 559 26988598 - PP_1868 - DEAD-box ATP dependent DNA helicase 1854 65.03 0 2092442..2093236 - 264 26988599 - PP_1869 - hypothetical protein 1855 62.67 0 2093311..2093961 + 216 26988600 tpm PP_1870 - thiopurine S-methyltransferase 1856 62.73 0 2094059..2094946 - 295 26988601 htpX PP_1871 - heat shock protein HtpX 1857 61.96 0 2095263..2096474 - 403 26988602 - PP_1872 - aminotransferase AlaT 1858 63.38 0 2096642..2097037 + 131 26988603 - PP_1873 - methionine sulfoxide reductase B 1859 61.55 0 2097051..2097539 + 162 26988604 - PP_1874 - glutathione peroxidase 1860 64.04 0 2097529..2099886 - 785 26988605 - PP_1875 - histidine kinase 1861 65.04 0 2099932..2100978 + 348 26988606 - PP_1876 - hypothetical protein 1862 63.56 0 2100979..2101461 + 160 26988607 - PP_1877 - GAF domain-containing protein 1863 60.29 0 2101537..2102304 - 255 26988608 - PP_1878 - hypothetical protein 1864 58.35 0 2103366..2104880 - 504 26988609 - PP_1879 - hypothetical protein 1865 64.30 0 2104921..2107113 - 730 26988610 - PP_1880 - outer membrane autotransporter 1866 59.26 0 2107302..2109326 - 674 26988611 - PP_1881 - hypothetical protein 1867 60.75 0 2109384..2114282 - 1632 26988612 - PP_1882 - hypothetical protein 1868 59.12 0 2114376..2116283 + 635 26988613 - PP_1883 - hypothetical protein 1869 57.50 -1 2116322..2118787 + 821 26988614 - PP_1884 - hypothetical protein 1870 62.17 0 2118847..2121201 + 784 26988615 - PP_1885 - hypothetical protein 1871 58.67 0 2121170..2124097 + 975 26988616 - PP_1886 - hypothetical protein 1872 58.35 0 2124627..2128499 + 1290 26988617 - PP_1887 - hypothetical protein 1873 60.00 0 2128549..2129643 - 364 26988618 - PP_1888 - fimbrial protein 1874 62.90 0 2129700..2132195 - 831 26988619 fimD PP_1889 - fimbrial biogenesis outer membrane usher protein 1875 54.62 -1 2132229..2133008 - 259 26988620 - PP_1890 - pili assembly chaperone 1876 55.93 -1 2133062..2133601 - 179 26988621 fimI PP_1891 - type 1 pili subunit FimI 1877 58.39 0 2133821..2134231 - 136 26988622 - PP_1892 - hypothetical protein 1878 65.28 0 2134300..2136747 - 815 26988623 fadE PP_1893 - acyl-CoA dehydrogenase 1879 63.94 0 2137138..2137761 + 207 26988624 - PP_1894 - glutathione S-transferase family protein 1880 61.20 0 2137895..2138827 + 310 26988625 - PP_1895 - ABC transporter ATP-binding protein 1881 60.77 0 2138824..2139603 + 259 26988626 - PP_1896 - ABC transporter 1882 67.98 +1 2140262..2142475 + 737 26988627 - PP_1897 - DNA internalization-related competence protein ComEC/Rec2 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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