version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 125 59.41 0 131474..131776 + 100 26986870 - PP_0125 - cytochrome c-type protein 126 62.94 0 131808..132425 + 205 26986871 - PP_0126 - cytochrome c4 127 59.72 0 132577..133209 + 210 26986872 - PP_0127 - DsbA family thiol:disulfide interchange protein 128 62.92 0 133222..134076 + 284 26986873 - PP_0128 - endonuclease/exonuclease/phosphatase 129 62.18 0 134104..136041 + 645 26986874 - PP_0129 - GGDEF domain-containing protein 130 61.47 0 136115..136903 + 262 26986875 - PP_0130 - N-acetylmuramoyl-L-alanine amidase family protein 131 61.63 0 137099..138706 + 535 26986876 - PP_0131 - EAL domain containing protein 132 63.41 0 138721..140502 - 593 26986877 - PP_0132 - multi-sensor signal transduction histidine kinase 133 62.44 0 140499..141845 - 448 26986878 algB PP_0133 - two component, sigma54 specific, transcriptional regulator, Fis family 134 63.75 0 142056..142877 + 273 26986879 - PP_0134 - transport-associated protein 135 53.09 -2 143386..143547 + 53 26986880 - PP_0135 - hypothetical protein 136 63.27 0 143550..144020 + 156 26986881 - PP_0136 - inhibitor of vertebrate lysozyme 137 58.84 0 144766..146094 + 442 26986882 gltP PP_0137 - glutamate/aspartate:proton symporter 138 64.31 0 146242..147471 + 409 26986883 - PP_0138 - nucleoside recognition domain protein 139 63.99 0 147453..148088 - 211 26986884 - PP_0139 - putative lipoprotein 140 62.09 0 148085..149023 - 312 26986885 - PP_0140 - hypothetical protein 141 65.03 0 149027..149818 - 263 26986886 - PP_0141 - ABC transporter ATP-binding protein 142 63.93 0 149815..150948 - 377 26986887 - PP_0142 - hypothetical protein 143 63.55 0 151080..152105 - 341 26986888 - PP_0143 - hypothetical protein 144 63.40 0 152199..153605 - 468 26986889 - PP_0144 - insulinase family metalloprotease 145 62.87 0 153636..155294 - 552 26986890 - PP_0145 - sodium-dependent inorganic phosphate (Pi) transporter 146 57.64 -1 155577..156374 - 265 26986891 - PP_0146 - integral membrane protein TerC 147 62.16 0 156417..157724 - 435 26986892 - PP_0147 - citrate transporter 148 61.98 0 157989..158393 + 134 26986893 - PP_0148 - hypothetical protein 149 63.75 0 158432..160387 - 651 26986894 - PP_0149 - hypothetical protein 150 63.55 0 160384..160704 - 106 26986895 - PP_0150 - hypothetical protein 151 60.54 0 160741..161034 - 97 26986896 - PP_0151 - hypothetical protein 152 63.25 0 161124..161504 - 126 26986897 - PP_0152 - hypothetical protein 153 60.19 0 161750..161965 - 71 26986898 - PP_0153 - hypothetical protein 154 61.45 0 162339..163832 - 497 26986899 - PP_0154 - acetyl-CoA hydrolase/transferase family protein 155 60.75 0 164019..165455 - 478 26986900 pntB PP_0155 - NAD(P)(+) transhydrogenase (AB-specific) 156 61.00 0 167324..168241 - 305 26986901 - PP_0157 - LysR family transcriptional regulator 157 59.31 0 168402..169583 + 393 26986902 gcdH PP_0158 - acyl-CoA dehydrogenase domain-containing protein 158 61.75 0 169597..170817 + 406 26986903 - PP_0159 - CAIB/BAIF family protein 159 58.67 0 182074..184560 - 828 26986904 - PP_0160 - TonB-dependent siderophore receptor 160 61.65 0 184654..185610 - 318 26986905 - PP_0161 - anti-FecI sigma factor, FecR 161 61.49 0 185615..186136 - 173 26986906 - PP_0162 - ECF subfamily RNA polymerase sigma factor 162 61.01 0 186225..186914 - 229 26986907 - PP_0163 - GntR family transcriptional regulator 163 58.88 0 187239..187880 + 213 26986908 - PP_0164 - hypothetical protein 164 62.20 0 187891..189837 + 648 26986909 - PP_0165 - GGDEF domain-containing protein 165 60.49 0 189994..191370 - 458 26986910 - PP_0166 - HlyD family type I secretion membrane fusion protein 166 63.19 0 191360..193516 - 718 26986911 - PP_0167 - toxin secretion ATP-binding protein 167 61.03 0 194494..220542 + 8682 26986912 - PP_0168 - surface adhesion protein, putative 168 61.00 0 221228..222127 + 299 26986913 - PP_0169 - TauD/TfdA family dioxygenase 169 61.76 0 222145..223164 + 339 26986914 - PP_0170 - ABC transporter, periplasmic binding protein 170 61.00 0 223171..224034 + 287 26986915 - PP_0171 - ABC transporter ATP-binding protein 171 59.84 0 224049..224912 + 287 26986916 - PP_0172 - binding-protein-dependent transport systems inner membrane component 172 61.11 0 225030..225659 - 209 26986917 - PP_0173 - transcriptional factor-related protein 173 63.49 0 225774..226592 + 272 26986918 - PP_0174 - Sel1 domain protein repeat-containing protein 174 67.11 +1 226725..227177 + 150 26986919 - PP_0175 - MarR family transcriptional regulator 175 64.70 0 227174..229261 + 695 26986920 - PP_0176 - fusaric acid resistance protein region 176 59.15 0 229258..229470 + 70 26986921 - PP_0177 - hypothetical protein 177 64.27 0 229467..230342 + 291 26986922 - PP_0178 - secretion protein HlyD family protein 178 65.05 0 230339..231757 + 472 26986923 - PP_0179 - RND efflux transporter 179 65.52 0 231901..233811 + 636 26986924 - PP_0180 - cytochrome c family protein 180 57.32 -1 233874..234119 - 81 26986925 - PP_0181 - hypothetical protein 181 58.75 0 234189..234491 - 100 26986926 - PP_0182 - hypothetical protein 182 60.03 0 234640..235302 + 220 26986927 - PP_0183 - glutathione S-transferase family protein 183 62.97 0 235427..236833 - 468 26986928 argH PP_0184 - argininosuccinate lyase 184 61.83 0 237119..237862 + 247 26986929 pprA PP_0185 - LytTR family two component transcriptional regulator 185 65.29 0 237981..238922 + 313 26986930 hemC PP_0186 - porphobilinogen deaminase 186 65.89 +1 238919..239686 + 255 26986931 hemD PP_0187 - uroporphyrinogen-III synthase 187 64.63 0 239705..240832 + 375 26986932 - PP_0188 - uroporphyrin-III C-methyltransferase, putative 188 66.02 +1 240829..242067 + 412 26986933 hemY PP_0189 - HemY domain protein 189 62.92 0 242290..242796 + 168 26986934 - PP_0190 - disulphide bond formation protein DsbB 190 58.81 0 243028..243498 + 156 26986935 pfrA PP_0191 - anti-RNA polymerase sigma 70 factor 191 59.28 0 243507..244169 - 220 26986936 fkl PP_0192 - peptidyl-prolyl cis-trans isomerase FklB 192 52.94 -2 244185..244286 - 33 26986937 - PP_0193 - hypothetical protein 193 64.14 0 244324..245313 + 329 26986938 algP PP_0194 - alginate regulatory protein AlgP 194 64.58 0 245292..245771 - 159 26986939 - PP_0195 - hypothetical protein 195 64.42 0 245822..247732 + 636 26986940 - PP_0196 - ABC transporter ATP-binding protein 196 63.95 0 247732..248319 + 195 26986941 - PP_0197 - hypothetical protein 197 62.40 0 248419..249051 + 210 26986942 - PP_0198 - amino acid transporter LysE 198 60.24 0 249100..249846 - 248 26986943 - PP_0199 - SPFH domain-containing protein/band 7 family protein 199 66.52 +1 249855..251201 - 448 26986944 - PP_0200 - hypothetical protein 200 61.59 0 251267..251758 + 163 26986945 - PP_0201 - YbaK/prolyl-tRNA synthetase associated region 201 60.50 0 252777..253214 - 145 26986946 - PP_0202 - CBS domain-containing protein 202 60.72 0 253385..255115 - 576 26986947 - PP_0203 - hypothetical protein 203 62.00 0 255568..256317 + 249 26986948 - PP_0204 - GntR family transcriptional regulator 204 62.84 0 256314..258038 + 574 26986949 - PP_0205 - putative oxidoreductase 205 59.76 0 258101..258346 + 81 26986950 - PP_0206 - ferredoxin, 4Fe-4S 206 64.32 0 258466..259872 + 468 26986951 - PP_0207 - nitrate ABC transporter, periplasmic nitrate-binding protein, putative 207 65.52 0 259888..260670 + 260 26986952 - PP_0208 - nitrate ABC transporter, permease protein, putative 208 66.55 +1 260670..261521 + 283 26986953 - PP_0209 - nitrate ABC transporter, ATP-binding protein, putative 209 68.74 +1 261518..262483 + 321 26986954 - PP_0210 - phycobiliprotein, putative 210 62.77 0 262483..262764 + 93 26986955 - PP_0211 - hypothetical protein 211 62.30 0 263249..264691 + 480 26986956 gabD PP_0213 - succinate-semialdehyde dehydrogenase I 212 62.60 0 264874..266151 + 425 26986957 gabT PP_0214 - 4-aminobutyrate aminotransferase 213 64.84 0 266290..267549 + 419 26986958 - PP_0215 - putative signal transduction protein 214 61.40 0 267640..268626 - 328 26986959 - PP_0216 - diguanylate cyclase with PAS/PAC sensor 215 63.54 0 268768..269952 - 394 26986960 - PP_0217 - fatty acid desaturase 216 63.08 0 270099..271994 + 631 26986961 - PP_0218 - sensory box protein 217 62.17 0 272023..272667 - 214 26986962 - PP_0219 - binding-protein-dependent transport systems inner membrane component 218 64.59 0 272657..273766 - 369 26986963 - PP_0220 - ABC transporter ATP-binding protein 219 60.17 0 273768..274568 - 266 26986964 - PP_0221 - metal ABC transporter periplasmic-binding protein 220 64.50 0 274561..275946 - 461 26986965 - PP_0222 - DszA family monooxygenase 221 66.34 +1 275946..277166 - 406 26986966 - PP_0223 - DszC family monooxygenase 222 65.86 0 277263..278504 - 413 26986967 - PP_0224 - DszC family monooxygenase 223 63.50 0 278818..279576 - 252 26986968 - PP_0225 - putative amino-acid ABC transporter ATP-binding protein YecC 224 63.23 0 279579..280247 - 222 26986969 - PP_0226 - polar amino acid ABC transporter inner membrane subunit 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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