version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1648 64.85 0 1856818..1859076 + 752 26988393 - PP_1661 - dehydrogenase subunit, putative 1649 54.39 -1 1859177..1859404 - 75 26988394 - PP_1662 - hypothetical protein 1650 62.31 0 1859560..1860270 - 236 26988395 - PP_1663 - hypothetical protein 1651 64.37 0 1860279..1860932 - 217 26988396 purN PP_1664 - phosphoribosylglycinamide formyltransferase 1652 64.97 0 1860932..1861990 - 352 26988397 purM PP_1665 - phosphoribosylaminoimidazole synthetase 1653 67.13 +1 1862311..1863378 + 355 26988398 - PP_1666 - hypothetical protein 1654 62.85 0 1863391..1864464 + 357 26988399 - PP_1667 - hypothetical protein 1655 63.56 0 1864663..1865370 + 235 26988400 - PP_1668 - DNA replication initiation factor 1656 61.24 0 1865492..1866136 + 214 26988401 - PP_1669 - NLP/P60 protein 1657 62.55 0 1866279..1866812 + 177 26988402 - PP_1670 - NLP/P60 protein 1658 70.83 +2 1866949..1867116 - 55 26988403 - PP_1671 - hypothetical protein 1659 62.75 0 1867275..1867886 + 203 26988404 cobO PP_1672 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1660 67.98 +1 1867883..1869178 + 431 26988405 cobB PP_1673 - cobyrinic acid a,c-diamide synthase 1661 66.21 +1 1869175..1869825 + 216 26988406 - PP_1674 - cob(II)yrinic acid a,c-diamide reductase 1662 68.94 +1 1869807..1870730 + 307 26988407 cobD PP_1675 - cobalamin biosynthesis protein 1663 68.88 +1 1870723..1871715 + 330 26988408 cobC PP_1676 - threonine-phosphate decarboxylase 1664 64.05 0 1871712..1873166 + 484 26988409 cobQ PP_1677 - cobyric acid synthase 1665 64.75 0 1873168..1873689 + 173 26988410 cobU PP_1678 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1666 67.23 +1 1873686..1874741 + 351 26988411 cobT PP_1679 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1667 67.20 +1 1874738..1875304 + 188 26988412 - PP_1680 - alpha-ribazole-5'-phosphate phosphatase 1668 64.68 0 1875273..1876028 + 251 26988413 cobS PP_1681 - cobalamin synthase 1669 63.37 0 1876059..1877363 + 434 26988414 - PP_1682 - glycosy hydrolase family protein 1670 66.17 +1 1877426..1877830 + 134 26988415 - PP_1683 - MarR family transcriptional regulator 1671 63.72 0 1877875..1879095 + 406 26988416 - PP_1684 - major facilitator transporter 1672 59.35 0 1879092..1879214 + 40 26988417 - PP_1685 - hypothetical protein 1673 58.62 0 1879204..1879812 + 202 26988418 - PP_1686 - glutathione peroxidase 1674 57.33 -1 1879948..1880247 - 99 26988419 - PP_1687 - hypothetical protein 1675 62.69 0 1880323..1881252 + 309 26988420 - PP_1688 - LysR family transcriptional regulator 1676 59.87 0 1881294..1882559 - 421 26988421 - PP_1689 - aromatic hydrocarbon degradation protein 1677 62.73 0 1882707..1883189 - 160 26988422 - PP_1690 - hypothetical protein 1678 60.44 0 1883439..1883663 - 74 26988423 - PP_1691 - hypothetical protein 1679 65.02 0 1884609..1885034 + 141 26988424 - PP_1692 - Sel1 domain protein repeat-containing protein 1680 65.64 0 1885106..1885300 - 64 26988425 - PP_1693 - hypothetical protein 1681 63.98 0 1885331..1886818 + 495 26988426 - PP_1694 - hypothetical protein 1682 64.86 0 1886790..1890269 - 1159 26988427 - PP_1695 - integral membrane sensor hybrid histidine kinase 1683 63.95 0 1890396..1891574 - 392 26988428 - PP_1696 - major facilitator superfamily MFS_1 1684 63.11 0 1891561..1892487 + 308 26988429 - PP_1697 - GntR family transcriptional regulator 1685 62.27 0 1892582..1893856 + 424 26988430 - PP_1698 - major facilitator family transporter 1686 65.36 0 1893872..1894714 + 280 26988431 - PP_1699 - amidohydrolase 2 1687 62.29 0 1894764..1896749 + 661 26988432 - PP_1700 - phospholipid/glycerol acyltransferase 1688 63.52 0 1896753..1897070 - 105 26988433 sugE PP_1701 - small multidrug resistance protein 1689 61.89 0 1897288..1898208 - 306 26988434 rdgC PP_1702 - recombination associated protein 1690 65.46 0 1899399..1903472 + 1357 26988435 - PP_1703 - molybdopterin oxidoreductase 1691 62.70 0 1903494..1903619 + 41 26988436 - PP_1704 - hypothetical protein 1692 65.88 +1 1903743..1906295 + 850 26988437 nirB PP_1705 - nitrite reductase (NAD(P)H), large subunit 1693 65.29 0 1906295..1906657 + 120 26988438 nirD PP_1706 - nitrite reductase (NAD(P)H), small subunit 1694 65.93 +1 1906785..1907735 - 316 26988439 - PP_1707 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1695 65.74 0 1907760..1908518 - 252 26988440 - PP_1708 - short chain dehydrogenase/reductase family oxidoreductase 1696 66.67 +1 1908537..1909247 - 236 26988441 - PP_1709 - fumarylacetoacetate hydrolase family protein 1697 64.21 0 1909468..1910808 - 446 26988442 - PP_1710 - major facilitator superfamily transporter phthalate permease 1698 64.52 0 1911104..1912033 + 309 26988443 - PP_1711 - AraC family transcriptional regulator 1699 57.59 -1 1912059..1913468 - 469 26988444 - PP_1712 - hypothetical protein 1700 67.20 +1 1913631..1914563 + 310 26988445 pcaQ PP_1713 - LysR family transcriptional regulator 1701 60.03 0 1914817..1915569 + 250 26988446 fklB-2 PP_1714 - peptidyl-prolyl cis-trans isomerase, FKBP-type 1702 65.98 +1 1915858..1916295 + 145 26988447 - PP_1715 - hypothetical protein 1703 65.78 0 1916410..1916748 + 112 26988448 - PP_1716 - Cro/CI family transcriptional regulator 1704 64.50 0 1916745..1917113 + 122 26988449 - PP_1717 - hypothetical protein 1705 62.02 0 1917139..1918278 - 379 26988450 - PP_1718 - diguanylate phosphodiesterase 1706 60.99 0 1918339..1920453 - 704 26988451 prc PP_1719 - carboxyl-terminal protease 1707 65.63 0 1920560..1921522 + 320 26988452 - PP_1720 - alcohol dehydrogenase, zinc-containing 1708 60.70 0 1921583..1922236 - 217 26988453 - PP_1721 - HAD superfamily hydrolase 1709 65.76 0 1922251..1923240 - 329 26988454 - PP_1722 - ABC transporter ATP-binding protein 1710 64.78 0 1923242..1924036 - 264 26988455 - PP_1723 - binding-protein-dependent transport systems inner membrane component 1711 63.10 0 1924026..1924865 - 279 26988456 - PP_1724 - binding-protein-dependent transport systems inner membrane component 1712 64.87 0 1924862..1925698 - 278 26988457 - PP_1725 - type I phosphodiesterase/nucleotide pyrophosphatase 1713 62.25 0 1925798..1926862 - 354 26988458 - PP_1726 - ABC transporter, periplasmic binding protein 1714 64.99 0 1927190..1927903 + 237 26988459 - PP_1727 - GntR family transcriptional regulator 1715 64.30 0 1927935..1930088 - 717 26988460 - PP_1728 - hypothetical protein 1716 54.41 -1 1930127..1930330 - 67 26988461 - PP_1729 - hypothetical protein 1717 64.65 0 1930435..1931724 - 429 26988462 - PP_1730 - putative aminopeptidase 2 1718 55.29 -1 1932680..1932934 - 84 26988463 minE PP_1732 - cell division topological specificity factor MinE 1719 59.16 0 1932938..1933750 - 270 26988464 minD PP_1733 - septum site-determining protein MinD 1720 64.13 0 1933860..1934687 - 275 26988465 minC PP_1734 - septum formation inhibitor 1721 65.28 0 1934733..1935668 + 311 26988466 htrB PP_1735 - lipid A biosynthesis lauroyl acyltransferase 1722 68.32 +1 1935696..1936844 + 382 26988467 - PP_1736 - patatin 1723 61.31 0 1936934..1937680 - 248 26988468 - PP_1737 - VacJ family lipoprotein 1724 61.05 0 1937754..1939052 - 432 26988469 - PP_1738 - hypothetical protein 1725 65.08 0 1939231..1939608 + 125 26988470 - PP_1739 - hypothetical protein 1726 66.29 +1 1939696..1941273 - 525 26988471 - PP_1740 - beta (1-6) glucans synthase, putative 1727 58.45 0 1941456..1942319 + 287 26988472 - PP_1741 - substrate-binding region of ABC-type glycine betaine transport system 1728 57.37 -1 1942524..1942835 + 103 26988473 - PP_1742 - hypothetical protein 1729 62.10 0 1942832..1944496 + 554 26988474 actP PP_1743 - acetate permease 1730 52.94 -2 1944758..1944910 - 50 26988475 - PP_1744 - hypothetical protein 1731 64.94 0 1945117..1945926 + 269 26988476 - PP_1745 - short chain dehydrogenase 1732 60.00 0 1946047..1946226 + 59 26988477 - PP_1746 - carbon storage regulator, CsrA 1733 60.53 0 1946241..1946468 - 75 26988478 - PP_1747 - hypothetical protein 1734 65.40 0 1946552..1947736 - 394 26988479 - PP_1748 - hypothetical protein 1735 67.81 +1 1947906..1949651 - 581 26988480 - PP_1749 - acetyltransferase 1736 66.50 +1 1949655..1951442 - 595 26988481 asnB PP_1750 - asparagine synthetase 1737 66.11 +1 1951573..1953537 - 654 26988482 mnmC PP_1751 - 5-methylaminomethyl-2-thiouridine methyltransferase 1738 62.99 0 1953674..1955167 + 497 26988483 - PP_1752 - hypothetical protein 1739 64.00 0 1955360..1956334 + 324 26988484 - PP_1753 - hypothetical protein 1740 50.73 -2 1956409..1957569 + 386 26988485 - PP_1754 - hypothetical protein 1741 65.02 0 1957666..1959060 - 464 26988486 fumC-2 PP_1755 - fumarate hydratase 1742 63.05 0 1959215..1959739 + 174 26988487 - PP_1756 - hypothetical protein 1743 62.63 0 1959750..1960046 + 98 26988488 bolA PP_1757 - BolA family protein 1744 60.56 0 1960174..1961106 + 310 26988489 - PP_1758 - hypothetical protein 1745 70.00 +2 1961143..1961742 + 199 26988490 - PP_1759 - DSBA oxidoreductase 1746 64.43 0 1961735..1963567 + 610 26988491 - PP_1760 - ABC transporter ATP-binding protein 1747 61.16 0 1963390..1966311 + 973 26988492 - PP_1761 - sensory box protein/GGDEF family protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.