version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1500 66.54 +1 1717298..1718074 + 258 26988245 - PP_1513 - hypothetical protein 1501 50.15 -2 1718267..1719235 + 322 26988246 - PP_1514 - hypothetical protein 1502 63.08 0 1719365..1720006 - 213 26988247 - PP_1515 - TetR family transcriptional regulator 1503 69.48 +1 1720257..1721357 + 366 26988248 - PP_1516 - efflux transporter, RND family, MFP subunit 1504 63.54 0 1721364..1724429 + 1021 26988249 - PP_1517 - acriflavin resistance protein 1505 63.17 0 1724478..1725164 - 228 26988250 - PP_1518 - hypothetical protein 1506 61.65 0 1725198..1725596 - 132 26988251 - PP_1519 - putative lipoprotein 1507 65.02 0 1725673..1728159 - 828 26988252 plsB PP_1520 - glycerol-3-phosphate acyltransferase 1508 53.90 -1 1728229..1728369 - 46 26988253 - PP_1521 - hypothetical protein 1509 59.05 0 1728393..1728602 + 69 26988254 cspA-1 PP_1522 - cold shock protein CspA 1510 60.85 0 1728725..1729102 - 125 26988255 - PP_1523 - hypothetical protein 1511 69.00 +1 1729120..1729932 - 270 26988256 - PP_1524 - rRNA (guanine-N(1)-)-methyltransferase 1512 66.23 +1 1729932..1731083 - 383 26988257 dapE PP_1525 - succinyl-diaminopimelate desuccinylase 1513 62.81 0 1731274..1733865 - 863 26988258 - PP_1526 - beta-(1-3)-glucosyl transferase, putative 1514 64.22 0 1733979..1734794 + 271 26988259 - PP_1527 - UBA/THIF-type NAD/FAD binding protein 1515 65.69 0 1734907..1735317 - 136 26988260 - PP_1528 - Fe-S metabolism associated SufE 1516 66.75 +1 1735314..1736519 - 401 26988261 csdA PP_1529 - cysteine sulfinate desulfinase 1517 65.12 0 1736601..1737635 - 344 26988262 - PP_1530 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative 1518 60.06 0 1737667..1738014 - 115 26988263 - PP_1531 - arsenate reductase and related 1519 60.43 0 1738082..1739188 - 368 26988264 - PP_1532 - phage integrase, putative 1520 62.96 0 1739169..1739411 - 80 26988265 - PP_1533 - excisionase, putative 1521 58.18 0 1739445..1739762 - 105 26988266 - PP_1534 - hypothetical protein 1522 60.86 0 1739819..1740283 - 154 26988267 - PP_1535 - methyltransferase, putative 1523 63.02 0 1740298..1740681 - 127 26988268 - PP_1536 - hypothetical protein 1524 58.33 0 1740678..1740905 - 75 26988269 - PP_1537 - hypothetical protein 1525 62.55 0 1741156..1741908 - 250 26988270 - PP_1538 - hypothetical protein 1526 58.82 0 1741992..1742552 - 186 26988271 - PP_1539 - hypothetical protein 1527 60.89 0 1742872..1743096 - 74 26988272 - PP_1540 - hypothetical protein 1528 64.17 0 1743287..1744207 - 306 26988273 - PP_1541 - methyltransferase, putative 1529 60.80 0 1744274..1744870 - 198 26988274 - PP_1542 - hypothetical protein 1530 61.72 0 1745211..1745756 - 181 26988275 - PP_1543 - hypothetical protein 1531 59.17 0 1746075..1746461 - 128 26988276 - PP_1544 - hypothetical protein 1532 62.53 0 1746543..1747001 - 152 26988277 - PP_1545 - hypothetical protein 1533 60.00 0 1746998..1747267 - 89 26988278 - PP_1546 - hypothetical protein 1534 63.99 0 1747900..1748235 + 111 26988279 - PP_1547 - hypothetical protein 1535 59.59 0 1748226..1748663 - 145 26988280 - PP_1548 - hypothetical protein 1536 55.28 -1 1749380..1750231 - 283 26988281 - PP_1549 - Cro/CI family transcriptional regulator 1537 58.76 0 1750320..1750496 + 58 26988282 - PP_1550 - Cro/CI family transcriptional regulator 1538 59.77 0 1750638..1751492 + 284 26988283 - PP_1551 - phage replication protein O, putative 1539 65.67 0 1751590..1752294 + 234 26988284 - PP_1552 - IstB domain protein ATP-binding protein 1540 68.69 +1 1752297..1752593 + 98 26988285 - PP_1553 - hypothetical protein 1541 63.36 0 1752590..1753012 + 140 26988286 - PP_1554 - hypothetical protein 1542 63.99 0 1753027..1754298 + 423 26988287 - PP_1555 - phage integrase, putative 1543 61.37 0 1754295..1754615 + 106 26988288 - PP_1556 - hypothetical protein 1544 63.16 0 1754588..1754929 + 113 26988289 - PP_1557 - hypothetical protein 1545 58.48 0 1754940..1755281 + 113 26988290 - PP_1558 - antitermination protein Q, putative 1546 65.43 0 1755481..1755804 + 107 26988291 - PP_1559 - phage holin 1547 58.47 0 1755865..1756047 + 60 26988292 - PP_1560 - hypothetical protein 1548 63.41 0 1756038..1756406 + 122 26988293 - PP_1561 - phage holin, putative 1549 65.62 0 1756534..1756917 + 127 26988294 - PP_1562 - phage terminase, small subunit, putative 1550 60.97 0 1756941..1758626 + 561 26988295 - PP_1563 - phage terminase, large subunit, putative 1551 62.42 0 1758638..1758802 + 54 26988296 - PP_1564 - hypothetical protein 1552 63.89 0 1758834..1760129 + 431 26988297 - PP_1565 - HK97 family phage portal protein 1553 62.11 0 1760126..1760827 + 233 26988298 - PP_1566 - head maturation protease, putative 1554 62.73 0 1760849..1762093 + 414 26988299 - PP_1567 - HK97 family phage major capsid protein 1555 58.22 0 1762135..1762359 + 74 26988300 - PP_1568 - hypothetical protein 1556 62.89 0 1762363..1762839 + 158 26988301 - PP_1569 - hypothetical protein 1557 62.87 0 1762839..1763180 + 113 26988302 - PP_1570 - head-tail adaptor 1558 64.40 0 1763173..1763658 + 161 26988303 - PP_1571 - hypothetical protein 1559 64.23 0 1763655..1764023 + 122 26988304 - PP_1572 - hypothetical protein 1560 63.54 0 1764089..1764823 + 244 26988305 - PP_1573 - major tail protein, putative 1561 61.78 0 1764832..1765302 + 156 26988306 - PP_1574 - hypothetical protein 1562 62.96 0 1765365..1765526 + 53 26988307 - PP_1575 - hypothetical protein 1563 45.37 -2 1765588..1765911 + 107 26988308 - PP_1576 - immunity protein, putative 1564 58.60 0 1765958..1768399 + 813 26988309 - PP_1577 - lambda family phage tail tape measure protein 1565 62.08 0 1768396..1768875 + 159 26988310 - PP_1578 - hypothetical protein 1566 64.23 0 1769249..1772248 + 999 26988311 - PP_1579 - hypothetical protein 1567 57.89 0 1772258..1772713 + 151 26988312 - PP_1580 - hypothetical protein 1568 56.88 -1 1772814..1774805 + 663 26988313 - PP_1581 - BNR domain-containing protein 1569 57.94 0 1774817..1775893 + 358 26988314 - PP_1582 - hypothetical protein 1570 62.26 0 1775921..1776397 + 158 26988315 - PP_1583 - structural protein P5, putative 1571 66.87 +1 1776394..1776894 + 166 26988316 - PP_1584 - hypothetical protein 1572 61.33 0 1777554..1777853 - 99 26988317 - PP_1585 - antidote protein, putative 1573 56.63 -1 1777862..1778140 - 92 26988318 - PP_1586 - killer protein, putative 1574 62.49 0 1778337..1780037 + 566 26988319 - PP_1587 - Na+/H+ antiporter 1575 64.91 0 1780143..1781339 - 398 26988320 - PP_1588 - hypothetical protein 1576 63.49 0 1781370..1784072 - 900 26988321 glnD PP_1589 - PII uridylyl-transferase 1577 60.92 0 1784114..1784896 - 260 26988322 map PP_1590 - methionine aminopeptidase 1578 57.86 0 1785243..1785980 + 245 26988323 rpsB PP_1591 - 30S ribosomal protein S2 1579 58.33 0 1786166..1787029 + 287 26988324 tsf PP_1592 - elongation factor Ts 1580 59.95 0 1787211..1787954 + 247 26988325 pyrH PP_1593 - uridylate kinase 1581 61.29 0 1787951..1788508 + 185 26988326 frr PP_1594 - ribosome recycling factor 1582 64.15 0 1788524..1789279 + 251 26988327 uppS PP_1595 - undecaprenyl diphosphate synthase 1583 64.58 0 1789279..1790094 + 271 26988328 cdsA PP_1596 - phosphatidate cytidylyltransferase 1584 64.94 0 1790067..1791281 + 404 26988329 dxr PP_1597 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1585 62.33 0 1791347..1792705 + 452 26988330 - PP_1598 - membrane-associated zinc metalloprotease, putative 1586 60.44 0 1792779..1795139 + 786 26988331 - PP_1599 - surface antigen family outer membrane protein 1587 58.33 0 1795184..1795687 + 167 26988332 ompH PP_1600 - outer membrane chaperone Skp (OmpH) 1588 62.59 0 1795689..1796744 + 351 26988333 lpxD PP_1601 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1589 57.32 -1 1796808..1797299 + 163 26988334 fabZ PP_1602 - (3R)-hydroxymyristoyl-ACP dehydratase 1590 60.62 0 1797296..1798072 + 258 26988335 lpxA PP_1603 - UDP-N-acetylglucosamine acyltransferase 1591 66.40 +1 1798074..1799201 + 375 26988336 lpxB PP_1604 - lipid-A-disaccharide synthase 1592 62.18 0 1799203..1799826 + 207 26988337 rnhB PP_1605 - ribonuclease HII 1593 62.16 0 1800013..1803537 + 1174 26988338 dnaE PP_1606 - DNA polymerase III subunit alpha 1594 61.18 0 1803644..1804591 + 315 26988339 accA PP_1607 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 1595 67.13 +1 1804763..1806046 + 427 26988340 - PP_1608 - tRNA(Ile)-lysidine synthetase 1596 52.48 -2 1806092..1806232 + 46 26988341 - PP_1609 - hypothetical protein 1597 62.06 0 1806314..1807942 + 542 26988342 pyrG PP_1610 - CTP synthetase 1598 59.69 0 1807946..1808791 + 281 26988343 kdsA-1 PP_1611 - 2-dehydro-3-deoxyphosphooctonate aldolase 1599 60.08 0 1808946..1810235 + 429 26988344 eno PP_1612 - phosphopyruvate hydratase 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0