version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1445 64.55 0 1661869..1663050 + 393 26988190 purT PP_1457 - phosphoribosylglycinamide formyltransferase 2 1446 63.97 0 1663088..1664386 - 432 26988191 - PP_1458 - metabolite-proton symporter 1447 63.18 0 1664658..1665863 - 401 26988192 - PP_1459 - CBS domain-containing protein 1448 63.62 0 1665873..1666724 - 283 26988193 - PP_1460 - cytochrome c assembly protein 1449 62.71 0 1666755..1668371 + 538 26988194 ffh PP_1461 - signal recognition particle protein 1450 60.32 0 1668631..1668882 + 83 161378134 rpsP PP_1462 - 30S ribosomal protein S16 1451 56.42 -1 1668888..1669424 + 178 26988196 rimM PP_1463 - 16S rRNA-processing protein 1452 58.03 0 1669428..1670180 + 250 26988197 trmD PP_1464 - tRNA (guanine-N(1)-)-methyltransferase 1453 57.83 0 1670223..1670573 + 116 26988198 rplS PP_1465 - 50S ribosomal protein L19 1454 62.50 0 1670668..1671075 + 135 26988199 - PP_1466 - thioesterase superfamily protein 1455 64.89 0 1671079..1672884 - 601 26988200 - PP_1467 - sodium/hydrogen exchanger 1456 65.33 0 1672953..1673849 + 298 26988201 xerD PP_1468 - site-specific tyrosine recombinase XerD 1457 62.58 0 1673964..1674746 + 260 26988202 dsbC PP_1469 - thiol:disulfide interchange protein DsbC 1458 62.38 0 1674830..1676134 + 434 26988203 hom PP_1470 - homoserine dehydrogenase 1459 63.33 0 1676194..1677603 + 469 26988204 thrC PP_1471 - threonine synthase 1460 63.27 0 1677569..1678216 - 215 26988205 - PP_1472 - hypothetical protein 1461 60.82 0 1678224..1678514 + 96 26988206 - PP_1473 - hypothetical protein 1462 61.53 0 1678701..1679576 - 291 26988207 - PP_1474 - hypothetical protein 1463 65.00 0 1679597..1680796 - 399 26988208 - PP_1475 - L-carnitine dehydratase/bile acid-inducible protein F 1464 58.93 0 1680927..1681469 + 180 26988209 - PP_1476 - YaeQ family protein 1465 65.44 0 1681478..1683187 + 569 26988210 recJ PP_1477 - single-stranded-DNA-specific exonuclease RecJ 1466 63.69 0 1683418..1684524 + 368 26988211 - PP_1478 - NADH:flavin oxidoreductase/NADH oxidase 1467 52.25 -2 1684535..1684867 - 110 26988212 hicB-1 PP_1479 - hicB protein 1468 53.33 -2 1684864..1685118 - 84 26988213 hicA-1 PP_1480 - hicA protein 1469 65.33 0 1685350..1686774 - 474 26988214 - PP_1481 - gamma-aminobutyraldehyde dehydrogenase 1470 63.32 0 1686792..1687598 - 268 26988215 - PP_1482 - binding-protein-dependent transport systems inner membrane component 1471 64.58 0 1687588..1688499 - 303 26988216 - PP_1483 - binding-protein-dependent transport systems inner membrane component 1472 64.73 0 1688501..1689532 - 343 26988217 - PP_1484 - spermidine/putrescine ABC transporter ATPase 1473 67.41 +1 1689563..1689697 + 44 26988218 - PP_1485 - hypothetical protein 1474 63.09 0 1689681..1690826 - 381 26988219 - PP_1486 - polyamine ABC transporter, periplasmic polyamine-binding protein 1475 67.40 +1 1691049..1691729 + 226 26988220 - PP_1487 - hypothetical protein 1476 61.80 0 1691900..1693522 + 540 26988221 - PP_1488 - methyl-accepting chemotaxis sensory transducer 1477 64.89 0 1693528..1694034 + 168 26988222 - PP_1489 - CheW domain-containing protein 1478 65.49 0 1694031..1695305 + 424 26988223 - PP_1490 - methyltransferase, CheR-like 1479 65.90 +1 1695320..1695967 + 215 26988224 - PP_1491 - CheW domain-containing protein 1480 65.62 0 1695964..1698252 + 762 26988225 - PP_1492 - CheA signal transduction histidine kinase 1481 64.99 0 1698249..1699262 + 337 26988226 - PP_1493 - chemotaxis-specific methylesterase 1482 62.20 0 1699311..1700318 + 335 26988227 - PP_1494 - response regulator/GGDEF domain-containing protein 1483 61.68 0 1701645..1703147 + 500 26988228 lysS PP_1496 - lysyl-tRNA synthetase 1484 64.30 0 1703314..1704030 + 238 26988229 - PP_1497 - TetR family transcriptional regulator 1485 62.66 0 1704061..1704609 + 182 26988230 - PP_1498 - putative lipoprotein 1486 61.93 0 1704632..1705960 + 442 26988231 - PP_1499 - hypothetical protein 1487 64.94 0 1705932..1706855 + 307 26988232 - PP_1500 - putative lipoprotein 1488 63.61 0 1706852..1707178 + 108 26988233 - PP_1501 - hypothetical protein 1489 62.12 0 1707320..1708111 - 263 26988234 - PP_1502 - OmpA/MotB domain protein 1490 62.63 0 1708162..1708632 - 156 26988235 - PP_1503 - hypothetical protein 1491 61.64 0 1708852..1709229 - 125 26988236 - PP_1504 - hypothetical protein 1492 66.36 +1 1709378..1712005 + 875 26988237 ppc PP_1505 - phosphoenolpyruvate carboxylase 1493 61.14 0 1712263..1712913 + 216 26988238 adk PP_1506 - adenylate kinase 1494 65.78 0 1713053..1713727 + 224 26988239 - PP_1507 - hypothetical protein 1495 64.17 0 1713829..1714149 + 106 26988240 - PP_1508 - hypothetical protein 1496 62.41 0 1714153..1715022 + 289 26988241 - PP_1509 - hypothetical protein 1497 66.55 +1 1715051..1715881 + 276 26988242 - PP_1510 - carboxyvinyl-carboxyphosphonate phosphorylmutase, putative 1498 66.09 +1 1715881..1716570 + 229 26988243 - PP_1511 - extensin family protein 1499 65.86 0 1716573..1717193 - 206 26988244 - PP_1512 - hypothetical protein 1500 66.54 +1 1717298..1718074 + 258 26988245 - PP_1513 - hypothetical protein 1501 50.15 -2 1718267..1719235 + 322 26988246 - PP_1514 - hypothetical protein 1502 63.08 0 1719365..1720006 - 213 26988247 - PP_1515 - TetR family transcriptional regulator 1503 69.48 +1 1720257..1721357 + 366 26988248 - PP_1516 - efflux transporter, RND family, MFP subunit 1504 63.54 0 1721364..1724429 + 1021 26988249 - PP_1517 - acriflavin resistance protein 1505 63.17 0 1724478..1725164 - 228 26988250 - PP_1518 - hypothetical protein 1506 61.65 0 1725198..1725596 - 132 26988251 - PP_1519 - putative lipoprotein 1507 65.02 0 1725673..1728159 - 828 26988252 plsB PP_1520 - glycerol-3-phosphate acyltransferase 1508 53.90 -1 1728229..1728369 - 46 26988253 - PP_1521 - hypothetical protein 1509 59.05 0 1728393..1728602 + 69 26988254 cspA-1 PP_1522 - cold shock protein CspA 1510 60.85 0 1728725..1729102 - 125 26988255 - PP_1523 - hypothetical protein 1511 69.00 +1 1729120..1729932 - 270 26988256 - PP_1524 - rRNA (guanine-N(1)-)-methyltransferase 1512 66.23 +1 1729932..1731083 - 383 26988257 dapE PP_1525 - succinyl-diaminopimelate desuccinylase 1513 62.81 0 1731274..1733865 - 863 26988258 - PP_1526 - beta-(1-3)-glucosyl transferase, putative 1514 64.22 0 1733979..1734794 + 271 26988259 - PP_1527 - UBA/THIF-type NAD/FAD binding protein 1515 65.69 0 1734907..1735317 - 136 26988260 - PP_1528 - Fe-S metabolism associated SufE 1516 66.75 +1 1735314..1736519 - 401 26988261 csdA PP_1529 - cysteine sulfinate desulfinase 1517 65.12 0 1736601..1737635 - 344 26988262 - PP_1530 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative 1518 60.06 0 1737667..1738014 - 115 26988263 - PP_1531 - arsenate reductase and related 1519 60.43 0 1738082..1739188 - 368 26988264 - PP_1532 - phage integrase, putative 1520 62.96 0 1739169..1739411 - 80 26988265 - PP_1533 - excisionase, putative 1521 58.18 0 1739445..1739762 - 105 26988266 - PP_1534 - hypothetical protein 1522 60.86 0 1739819..1740283 - 154 26988267 - PP_1535 - methyltransferase, putative 1523 63.02 0 1740298..1740681 - 127 26988268 - PP_1536 - hypothetical protein 1524 58.33 0 1740678..1740905 - 75 26988269 - PP_1537 - hypothetical protein 1525 62.55 0 1741156..1741908 - 250 26988270 - PP_1538 - hypothetical protein 1526 58.82 0 1741992..1742552 - 186 26988271 - PP_1539 - hypothetical protein 1527 60.89 0 1742872..1743096 - 74 26988272 - PP_1540 - hypothetical protein 1528 64.17 0 1743287..1744207 - 306 26988273 - PP_1541 - methyltransferase, putative 1529 60.80 0 1744274..1744870 - 198 26988274 - PP_1542 - hypothetical protein 1530 61.72 0 1745211..1745756 - 181 26988275 - PP_1543 - hypothetical protein 1531 59.17 0 1746075..1746461 - 128 26988276 - PP_1544 - hypothetical protein 1532 62.53 0 1746543..1747001 - 152 26988277 - PP_1545 - hypothetical protein 1533 60.00 0 1746998..1747267 - 89 26988278 - PP_1546 - hypothetical protein 1534 63.99 0 1747900..1748235 + 111 26988279 - PP_1547 - hypothetical protein 1535 59.59 0 1748226..1748663 - 145 26988280 - PP_1548 - hypothetical protein 1536 55.28 -1 1749380..1750231 - 283 26988281 - PP_1549 - Cro/CI family transcriptional regulator 1537 58.76 0 1750320..1750496 + 58 26988282 - PP_1550 - Cro/CI family transcriptional regulator 1538 59.77 0 1750638..1751492 + 284 26988283 - PP_1551 - phage replication protein O, putative 1539 65.67 0 1751590..1752294 + 234 26988284 - PP_1552 - IstB domain protein ATP-binding protein 1540 68.69 +1 1752297..1752593 + 98 26988285 - PP_1553 - hypothetical protein 1541 63.36 0 1752590..1753012 + 140 26988286 - PP_1554 - hypothetical protein 1542 63.99 0 1753027..1754298 + 423 26988287 - PP_1555 - phage integrase, putative 1543 61.37 0 1754295..1754615 + 106 26988288 - PP_1556 - hypothetical protein 1544 63.16 0 1754588..1754929 + 113 26988289 - PP_1557 - hypothetical protein 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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