version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 90 58.25 0 97274..97570 + 98 26986835 - PP_0090 - hypothetical protein 91 63.04 0 97606..98019 - 137 26986836 - PP_0091 - putative lipoprotein 92 58.70 0 98075..98488 - 137 26986837 - PP_0092 - putative lipoprotein 93 61.60 0 98487..99650 + 387 26986838 - PP_0093 - hypothetical protein 94 60.68 0 99757..100407 - 216 26986839 - PP_0094 - HAD superfamily hydrolase 95 62.30 0 100529..101077 - 182 26986840 - PP_0095 - anhydrase family 3 protein 96 64.33 0 101180..103231 + 683 26986841 prlC PP_0096 - oligopeptidase A 97 61.70 0 103228..103509 + 93 26986842 - PP_0097 - hypothetical protein 98 58.05 0 103528..103701 + 57 26986843 - PP_0098 - hypothetical protein 99 62.23 0 103841..104899 + 352 26986844 - PP_0099 - radical SAM domain protein 100 61.39 0 105206..105925 + 239 26986845 cynT PP_0100 - carbonate dehydratase 101 65.28 0 106133..107650 + 505 26986846 - PP_0101 - sulphate transporter 102 56.23 -1 107786..108676 + 296 26986847 - PP_0102 - hypothetical protein 103 61.44 0 108809..109936 + 375 26986848 - PP_0103 - cytochrome c oxidase, subunit II 104 59.50 0 109980..111569 + 529 26986849 - PP_0104 - cytochrome c oxidase, subunit I 105 63.14 0 111579..112145 + 188 26986850 - PP_0105 - cytochrome C oxidase assembly protein 106 58.67 0 112162..113049 + 295 26986851 - PP_0106 - cytochrome c oxidase, subunit III 107 63.27 0 113072..114073 + 333 26986852 - PP_0107 - hypothetical protein 108 64.78 0 114042..114623 + 193 26986853 - PP_0108 - hypothetical protein 109 65.09 0 114633..115712 + 359 26986854 - PP_0109 - cytochrome oxidase assembly 110 63.09 0 115697..116590 + 297 26986855 cyoE-1 PP_0110 - protoheme IX farnesyltransferase 111 61.45 0 116587..117219 + 210 26986856 - PP_0111 - electron transport protein SCO1/SenC 112 60.18 0 117313..118083 - 256 26986857 - PP_0112 - metal ABC transporter periplasmic-binding protein 113 59.97 0 118148..118819 - 223 26986858 - PP_0113 - ABC transporter, permease protein 114 63.89 0 118819..119826 - 335 26986859 - PP_0114 - ABC transporter ATP-binding protein 115 61.00 0 120054..122189 + 711 26986860 katE PP_0115 - hydroperoxidase II 116 62.85 0 122250..122957 - 235 26986861 - PP_0116 - putative lipoprotein 117 64.11 0 123084..123866 - 260 26986862 znuB PP_0117 - hypothetical protein 118 65.63 0 123859..124632 - 257 26986863 znuC PP_0118 - zinc ABC transporter ATP-binding protein 119 66.42 +1 124629..125036 - 135 26986864 - PP_0119 - FUR family transcriptional regulator 120 62.49 0 125181..126089 + 302 26986865 - PP_0120 - periplasmic solute binding protein 121 64.14 0 126139..127089 - 316 26986866 thrB PP_0121 - homoserine kinase 122 56.60 -1 127159..127446 - 95 26986867 - PP_0122 - hypothetical protein 123 64.08 0 127522..130269 + 915 26986868 polA PP_0123 - DNA polymerase I 124 60.51 0 130640..131272 - 210 26986869 - PP_0124 - GTPase EngB 125 59.41 0 131474..131776 + 100 26986870 - PP_0125 - cytochrome c-type protein 126 62.94 0 131808..132425 + 205 26986871 - PP_0126 - cytochrome c4 127 59.72 0 132577..133209 + 210 26986872 - PP_0127 - DsbA family thiol:disulfide interchange protein 128 62.92 0 133222..134076 + 284 26986873 - PP_0128 - endonuclease/exonuclease/phosphatase 129 62.18 0 134104..136041 + 645 26986874 - PP_0129 - GGDEF domain-containing protein 130 61.47 0 136115..136903 + 262 26986875 - PP_0130 - N-acetylmuramoyl-L-alanine amidase family protein 131 61.63 0 137099..138706 + 535 26986876 - PP_0131 - EAL domain containing protein 132 63.41 0 138721..140502 - 593 26986877 - PP_0132 - multi-sensor signal transduction histidine kinase 133 62.44 0 140499..141845 - 448 26986878 algB PP_0133 - two component, sigma54 specific, transcriptional regulator, Fis family 134 63.75 0 142056..142877 + 273 26986879 - PP_0134 - transport-associated protein 135 53.09 -2 143386..143547 + 53 26986880 - PP_0135 - hypothetical protein 136 63.27 0 143550..144020 + 156 26986881 - PP_0136 - inhibitor of vertebrate lysozyme 137 58.84 0 144766..146094 + 442 26986882 gltP PP_0137 - glutamate/aspartate:proton symporter 138 64.31 0 146242..147471 + 409 26986883 - PP_0138 - nucleoside recognition domain protein 139 63.99 0 147453..148088 - 211 26986884 - PP_0139 - putative lipoprotein 140 62.09 0 148085..149023 - 312 26986885 - PP_0140 - hypothetical protein 141 65.03 0 149027..149818 - 263 26986886 - PP_0141 - ABC transporter ATP-binding protein 142 63.93 0 149815..150948 - 377 26986887 - PP_0142 - hypothetical protein 143 63.55 0 151080..152105 - 341 26986888 - PP_0143 - hypothetical protein 144 63.40 0 152199..153605 - 468 26986889 - PP_0144 - insulinase family metalloprotease 145 62.87 0 153636..155294 - 552 26986890 - PP_0145 - sodium-dependent inorganic phosphate (Pi) transporter 146 57.64 -1 155577..156374 - 265 26986891 - PP_0146 - integral membrane protein TerC 147 62.16 0 156417..157724 - 435 26986892 - PP_0147 - citrate transporter 148 61.98 0 157989..158393 + 134 26986893 - PP_0148 - hypothetical protein 149 63.75 0 158432..160387 - 651 26986894 - PP_0149 - hypothetical protein 150 63.55 0 160384..160704 - 106 26986895 - PP_0150 - hypothetical protein 151 60.54 0 160741..161034 - 97 26986896 - PP_0151 - hypothetical protein 152 63.25 0 161124..161504 - 126 26986897 - PP_0152 - hypothetical protein 153 60.19 0 161750..161965 - 71 26986898 - PP_0153 - hypothetical protein 154 61.45 0 162339..163832 - 497 26986899 - PP_0154 - acetyl-CoA hydrolase/transferase family protein 155 60.75 0 164019..165455 - 478 26986900 pntB PP_0155 - NAD(P)(+) transhydrogenase (AB-specific) 156 61.00 0 167324..168241 - 305 26986901 - PP_0157 - LysR family transcriptional regulator 157 59.31 0 168402..169583 + 393 26986902 gcdH PP_0158 - acyl-CoA dehydrogenase domain-containing protein 158 61.75 0 169597..170817 + 406 26986903 - PP_0159 - CAIB/BAIF family protein 159 58.67 0 182074..184560 - 828 26986904 - PP_0160 - TonB-dependent siderophore receptor 160 61.65 0 184654..185610 - 318 26986905 - PP_0161 - anti-FecI sigma factor, FecR 161 61.49 0 185615..186136 - 173 26986906 - PP_0162 - ECF subfamily RNA polymerase sigma factor 162 61.01 0 186225..186914 - 229 26986907 - PP_0163 - GntR family transcriptional regulator 163 58.88 0 187239..187880 + 213 26986908 - PP_0164 - hypothetical protein 164 62.20 0 187891..189837 + 648 26986909 - PP_0165 - GGDEF domain-containing protein 165 60.49 0 189994..191370 - 458 26986910 - PP_0166 - HlyD family type I secretion membrane fusion protein 166 63.19 0 191360..193516 - 718 26986911 - PP_0167 - toxin secretion ATP-binding protein 167 61.03 0 194494..220542 + 8682 26986912 - PP_0168 - surface adhesion protein, putative 168 61.00 0 221228..222127 + 299 26986913 - PP_0169 - TauD/TfdA family dioxygenase 169 61.76 0 222145..223164 + 339 26986914 - PP_0170 - ABC transporter, periplasmic binding protein 170 61.00 0 223171..224034 + 287 26986915 - PP_0171 - ABC transporter ATP-binding protein 171 59.84 0 224049..224912 + 287 26986916 - PP_0172 - binding-protein-dependent transport systems inner membrane component 172 61.11 0 225030..225659 - 209 26986917 - PP_0173 - transcriptional factor-related protein 173 63.49 0 225774..226592 + 272 26986918 - PP_0174 - Sel1 domain protein repeat-containing protein 174 67.11 +1 226725..227177 + 150 26986919 - PP_0175 - MarR family transcriptional regulator 175 64.70 0 227174..229261 + 695 26986920 - PP_0176 - fusaric acid resistance protein region 176 59.15 0 229258..229470 + 70 26986921 - PP_0177 - hypothetical protein 177 64.27 0 229467..230342 + 291 26986922 - PP_0178 - secretion protein HlyD family protein 178 65.05 0 230339..231757 + 472 26986923 - PP_0179 - RND efflux transporter 179 65.52 0 231901..233811 + 636 26986924 - PP_0180 - cytochrome c family protein 180 57.32 -1 233874..234119 - 81 26986925 - PP_0181 - hypothetical protein 181 58.75 0 234189..234491 - 100 26986926 - PP_0182 - hypothetical protein 182 60.03 0 234640..235302 + 220 26986927 - PP_0183 - glutathione S-transferase family protein 183 62.97 0 235427..236833 - 468 26986928 argH PP_0184 - argininosuccinate lyase 184 61.83 0 237119..237862 + 247 26986929 pprA PP_0185 - LytTR family two component transcriptional regulator 185 65.29 0 237981..238922 + 313 26986930 hemC PP_0186 - porphobilinogen deaminase 186 65.89 +1 238919..239686 + 255 26986931 hemD PP_0187 - uroporphyrinogen-III synthase 187 64.63 0 239705..240832 + 375 26986932 - PP_0188 - uroporphyrin-III C-methyltransferase, putative 188 66.02 +1 240829..242067 + 412 26986933 hemY PP_0189 - HemY domain protein 189 62.92 0 242290..242796 + 168 26986934 - PP_0190 - disulphide bond formation protein DsbB 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.