version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1274 65.04 0 1467211..1468689 - 492 26988019 algE PP_1284 - outer membrane protein AlgE 1275 65.70 0 1468686..1470140 - 484 26988020 algK PP_1285 - Sel1 domain protein repeat-containing protein 1276 64.35 0 1470130..1471296 - 388 26988021 - PP_1286 - type IV pilus assembly PilZ 1277 61.44 0 1471334..1472824 - 496 26988022 - PP_1287 - alginate biosynthesis protein Alg8 1278 62.26 0 1472902..1474218 - 438 26988023 algD PP_1288 - GDP-mannose 6-dehydrogenase 1279 61.41 0 1475019..1475798 - 259 26988024 - PP_1289 - hypothetical protein 1280 62.97 0 1475819..1477063 + 414 26988025 - PP_1290 - polysaccharide deacetylase 1281 61.29 0 1477345..1478739 + 464 26988026 - PP_1291 - PhoH family protein 1282 63.91 0 1478935..1479405 + 156 26988027 moaC PP_1292 - molybdenum cofactor biosynthesis protein C 1283 61.04 0 1479402..1479650 + 82 26988028 moaD PP_1293 - molybdopterin converting factor, subunit 1 1284 63.31 0 1479653..1480099 + 148 26988029 moaE PP_1294 - molybdopterin biosynthesis MoaE protein 1285 63.55 0 1480293..1481735 - 480 161378136 rhlB PP_1295 - ATP-dependent RNA helicase RhlB 1286 61.49 0 1481836..1482492 - 218 26988031 estB PP_1296 - carboxylesterase 1287 62.29 0 1482825..1483853 + 342 26988032 aapJ PP_1297 - general amino acid ABC transporter, periplasmic binding protein 1288 60.22 0 1483921..1485099 + 392 26988033 aapQ PP_1298 - polar amino acid ABC transporter inner membrane subunit 1289 62.39 0 1485110..1486207 + 365 26988034 aapM PP_1299 - polar amino acid ABC transporter inner membrane subunit 1290 61.57 0 1486218..1486982 + 254 26988035 aapP PP_1300 - general amino acid ABC transporter, ATP-binding protein 1291 62.86 0 1487112..1488320 - 402 26988036 algW PP_1301 - 2-alkenal reductase 1292 62.71 0 1488441..1489199 + 252 26988037 - PP_1302 - hypothetical protein 1293 59.80 0 1489402..1490319 + 305 26988038 cysD PP_1303 - sulfate adenylyltransferase subunit 2 1294 63.09 0 1490336..1492237 + 633 26988039 cysNC PP_1304 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 1295 41.29 -2 1492332..1492595 - 87 26988040 - PP_1305 - Pyocin S-type immunity protein, putative 1296 55.03 -1 1492592..1494868 - 758 26988041 - PP_1306 - pyocin S-type Killer domain-containing protein 1297 59.17 0 1494963..1495442 - 159 26988042 - PP_1307 - AsnC family transcriptional regulator 1298 61.65 0 1495570..1496766 + 398 26988043 mdeA PP_1308 - methionine gamma-lyase 1299 61.19 0 1496838..1497275 - 145 26988044 - PP_1309 - hypothetical protein 1300 64.94 0 1497411..1498046 + 211 26988045 - PP_1310 - hypothetical protein 1301 64.30 0 1498072..1499421 + 449 26988046 - PP_1311 - tryptophanyl-tRNA synthetase 1302 59.91 0 1499583..1500677 + 364 26988047 - PP_1312 - AFG1-family ATPase 1303 60.91 0 1500784..1501704 - 306 26988048 - PP_1313 - AraC family transcriptional regulator 1304 64.36 0 1501895..1502935 - 346 26988049 - PP_1314 - aldo/keto reductase family oxidoreductase 1305 54.08 -1 1503194..1503622 + 142 26988050 rplM PP_1315 - 50S ribosomal protein L13 1306 57.76 -1 1503637..1504029 + 130 26988051 rpsI PP_1316 - 30S ribosomal protein S9 1307 63.47 0 1504292..1504885 + 197 26988052 petA PP_1317 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 1308 57.59 -1 1504885..1506096 + 403 26988053 petB PP_1318 - ubiquinol--cytochrome c reductase, cytochrome b 1309 56.92 -1 1506096..1506875 + 259 26988054 petC PP_1319 - ubiquinol--cytochrome c reductase, cytochrome c1 1310 60.74 0 1506992..1507615 + 207 26988055 sspA PP_1320 - stringent starvation protein A 1311 58.23 0 1507596..1508057 + 153 26988056 sspB PP_1321 - ClpXP protease specificity-enhancing factor 1312 61.31 0 1508119..1508697 - 192 26988057 - PP_1322 - transport-associated protein 1313 61.56 0 1508694..1509281 - 195 26988058 gmhA PP_1323 - phosphoheptose isomerase 1314 61.60 0 1509374..1509748 - 124 26988059 - PP_1324 - hypothetical protein 1315 67.60 +1 1509745..1511562 - 605 26988060 - PP_1325 - LppC family lipoprotein 1316 64.63 0 1511740..1512624 + 294 26988061 - PP_1326 - uroporphyrin-III C/tetrapyrrole methyltransferase 1317 59.07 0 1513358..1513831 + 157 26988062 - PP_1328 - cell division protein MraZ 1318 63.08 0 1513828..1514775 + 315 26988063 mraW PP_1329 - S-adenosyl-methyltransferase MraW 1319 59.18 0 1514772..1515065 + 97 26988064 ftsL PP_1330 - cell division protein FtsL 1320 63.75 0 1515062..1516810 + 582 26988065 ftsI PP_1331 - peptidoglycan glycosyltransferase 1321 63.11 0 1516807..1518297 + 496 26988066 murE PP_1332 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 1322 62.43 0 1518290..1519657 + 455 26988067 murF PP_1333 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 1323 61.31 0 1519657..1520739 + 360 26988068 mraY PP_1334 - phospho-N-acetylmuramoyl-pentapeptide-transferase 1324 64.60 0 1520740..1522092 + 450 26988069 murD PP_1335 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1325 62.39 0 1522089..1523303 + 404 26988070 ftsW PP_1336 - cell division protein FtsW 1326 65.00 0 1523293..1524372 + 359 26988071 murG PP_1337 - N-acetylglucosaminyl transferase 1327 64.60 0 1524365..1525813 + 482 26988072 murC PP_1338 - UDP-N-acetylmuramate--L-alanine ligase 1328 63.74 0 1525810..1526766 + 318 26988073 ddl PP_1339 - D-alanine--D-alanine ligase 1329 65.17 0 1526772..1527641 + 289 26988074 ftsQ PP_1340 - cell division protein FtsQ 1330 64.04 0 1527587..1528918 + 443 26988075 ftsA PP_1341 - cell division protein FtsA 1331 62.16 0 1528974..1530170 + 398 26988076 ftsZ PP_1342 - cell division protein FtsZ 1332 59.10 0 1530283..1531194 + 303 26988077 lpxC PP_1343 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1333 65.56 0 1531242..1531871 - 209 26988078 - PP_1344 - hypothetical protein 1334 60.27 0 1532070..1534805 + 911 161378135 secA PP_1345 - preprotein translocase subunit SecA 1335 63.88 0 1534988..1536205 + 405 26988080 argJ PP_1346 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1336 65.09 0 1536361..1536993 + 210 26988081 - PP_1347 - glutathione S-transferase family protein 1337 65.93 +1 1536990..1537934 + 314 26988082 - PP_1348 - hypothetical protein 1338 63.14 0 1537967..1538533 - 188 26988083 - PP_1349 - ATP--cobalamin adenosyltransferase 1339 62.83 0 1538535..1540565 - 676 26988084 - PP_1350 - multi-sensor signal transduction histidine kinase 1340 66.34 +1 1540603..1541520 - 305 26988085 - PP_1351 - 2-dehydropantoate 2-reductase 1341 57.00 -1 1541621..1542106 + 161 26988086 - PP_1352 - nucleotide-binding protein 1342 61.25 0 1542217..1543065 + 282 26988087 - PP_1353 - MscS mechanosensitive ion channel 1343 64.26 0 1543193..1544437 + 414 26988088 - PP_1354 - major facilitator transporter 1344 63.57 0 1544551..1546098 - 515 26988089 ampG PP_1355 - AmpG-related permease 1345 65.25 0 1546142..1546495 - 117 26988090 - PP_1356 - hypothetical protein 1346 58.95 0 1546543..1547670 + 375 26988091 - PP_1357 - hypothetical protein 1347 61.84 0 1547615..1548484 + 289 26988092 - PP_1358 - hypothetical protein 1348 64.72 0 1548550..1549011 + 153 26988093 fxsA PP_1359 - FxsA 1349 59.52 0 1549256..1549549 + 97 26988094 groES PP_1360 - co-chaperonin GroES 1350 59.54 0 1549597..1551237 + 546 26988095 groEL PP_1361 - chaperonin GroEL 1351 63.64 0 1551363..1552817 - 484 26988096 pykA PP_1362 - pyruvate kinase 1352 62.94 0 1552956..1553384 + 142 26988097 - PP_1363 - hypothetical protein 1353 56.12 -1 1553394..1553867 + 157 26988098 - PP_1364 - type IV pilus assembly PilZ 1354 59.83 0 1553925..1555358 + 477 26988099 sbcB PP_1365 - exonuclease I 1355 56.61 -1 1555432..1555809 - 125 26988100 - PP_1366 - transcriptional regulator MvaT, P16 subunit 1356 60.45 0 1556093..1556944 + 283 26988101 purU PP_1367 - formyltetrahydrofolate deformylase 1357 65.16 0 1557176..1558168 - 330 26988102 - PP_1368 - hypothetical protein 1358 62.98 0 1558165..1558896 - 243 26988103 - PP_1369 - hypothetical protein 1359 63.64 0 1558922..1560043 - 373 26988104 - PP_1370 - glycosyl transferase, group 1 family protein 1360 61.76 0 1560212..1562086 - 624 26988105 - PP_1371 - methyl-accepting chemotaxis transducer 1361 64.97 0 1562255..1563730 + 491 26988106 - PP_1372 - hypothetical protein 1362 61.78 0 1563852..1565324 - 490 26988107 - PP_1373 - phosphate transporter 1363 58.21 0 1565637..1565837 - 66 26988108 - PP_1374 - hypothetical protein 1364 63.36 0 1566317..1567192 + 291 26988109 pcaR PP_1375 - pca regulon regulatory protein 1365 64.14 0 1567513..1568859 + 448 26988110 pcaK PP_1376 - benzoate transport 1366 65.25 0 1569186..1570388 + 400 26988111 pcaF PP_1377 - beta-ketoadipyl CoA thiolase 1367 61.16 0 1570576..1571865 + 429 26988112 pcaT PP_1378 - metabolite/H+ symporter, major facilitator superfamily (MFS) 1368 66.89 +1 1571875..1573227 + 450 26988113 pcaB PP_1379 - 3-carboxy-cis,cis-muconate cycloisomerase 1369 63.64 0 1573239..1574030 + 263 26988114 pcaD PP_1380 - 3-oxoadipate enol-lactonase 1370 61.83 0 1574041..1574433 + 130 26988115 pcaC PP_1381 - 4-carboxymuconolactone decarboxylase 1371 63.24 0 1574486..1575010 - 174 26988116 - PP_1382 - hypothetical protein 1372 61.81 0 1575220..1576476 - 418 26988117 - PP_1383 - BenF-like porin 1373 64.26 0 1576789..1578243 - 484 26988118 ttgC PP_1384 - RND efflux system, outer membrane lipoprotein, NodT family 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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