version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1229 63.24 0 1416751..1417509 + 252 26987974 - PP_1239 - beta-lactamase domain protein 1230 59.49 0 1417540..1418250 + 236 26987975 purC PP_1240 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1231 50.14 -2 1418530..1418880 - 116 26987976 - PP_1241 - hypothetical protein 1232 57.04 -1 1419237..1419371 - 44 26987977 - PP_1242 - hypothetical protein 1233 63.16 0 1419478..1419648 + 56 26987978 - PP_1243 - hypothetical protein 1234 57.65 -1 1419645..1420010 - 121 26987979 - PP_1244 - hypothetical protein 1235 63.08 0 1420519..1421409 + 296 26987980 - PP_1245 - hypothetical protein 1236 64.73 0 1421418..1423277 + 619 26987981 - PP_1246 - hypothetical protein 1237 61.07 0 1423207..1424670 - 487 26987982 - PP_1247 - hypothetical protein 1238 61.85 0 1424597..1425364 - 255 26987983 - PP_1248 - amino acid transporter LysE 1239 55.21 -1 1425405..1425596 + 63 26987984 - PP_1249 - hypothetical protein 1240 60.13 0 1426101..1427522 + 473 26987985 - PP_1250 - group II intron-encoding maturase 1241 61.11 0 1427844..1429481 + 545 161378137 mqo-2 PP_1251 - malate:quinone oxidoreductase 1242 60.06 0 1429961..1431382 + 473 26987987 - PP_1252 - group II intron-encoding maturase 1243 60.42 0 1431534..1431869 - 111 26987988 - PP_1253 - ArsR family transcriptional regulator 1244 65.20 0 1431919..1433010 + 363 26987989 xenA PP_1254 - xenobiotic reductase A 1245 65.71 0 1433134..1434381 - 415 26987990 - PP_1255 - FAD dependent oxidoreductase 1246 67.36 +1 1434384..1435961 - 525 26987991 - PP_1256 - ketoglutarate semialdehyde dehydrogenase 1247 65.08 0 1436114..1437061 - 315 26987992 - PP_1257 - dihydrodipicolinate synthase family protein 1248 66.56 +1 1437104..1438030 - 308 26987993 - PP_1258 - proline racemase 1249 64.25 0 1438054..1439667 - 537 26987994 - PP_1259 - amino acid ABC transporter permease 1250 55.38 -1 1440326..1441654 + 442 26987995 - PP_1260 - ISPpu9, transposase 1251 65.44 0 1442086..1443060 - 324 26987996 - PP_1261 - 2-hydroxyacid dehydrogenase 1252 61.39 0 1443236..1444183 - 315 26987997 - PP_1262 - LysR family transcriptional regulator 1253 65.56 0 1444375..1445904 + 509 26987998 - PP_1263 - RND efflux system, outer membrane lipoprotein, NodT family 1254 65.29 0 1445901..1448078 + 725 26987999 - PP_1264 - fusaric acid resistance protein region 1255 62.19 0 1448068..1448268 + 66 26988000 - PP_1265 - hypothetical protein 1256 60.98 0 1448279..1449139 + 286 26988001 - PP_1266 - secretion protein HlyD family protein 1257 54.49 -1 1449212..1449679 - 155 26988002 - PP_1267 - hypothetical protein 1258 56.92 -1 1449676..1450065 - 129 26988003 - PP_1268 - putative regulator PrlF 1259 65.77 0 1450095..1450541 - 148 26988004 - PP_1269 - universal stress protein 1260 63.69 0 1450815..1451720 + 301 26988005 - PP_1270 - LysR family transcriptional regulator 1261 66.28 +1 1451837..1453378 + 513 26988006 - PP_1271 - major facilitator transporter 1262 65.04 0 1453365..1454468 + 367 26988007 - PP_1272 - secretion protein HlyD family protein 1263 65.84 0 1454465..1455919 + 484 26988008 - PP_1273 - RND efflux system, outer membrane lipoprotein, NodT family 1264 67.16 +1 1456168..1456980 - 270 26988009 - PP_1274 - short chain dehydrogenase 1265 64.95 0 1457012..1457476 - 154 26988010 - PP_1275 - hypothetical protein 1266 55.12 -1 1457640..1458098 + 152 26988011 - PP_1276 - hypothetical protein 1267 61.66 0 1458138..1459595 - 485 26988012 algA PP_1277 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1268 63.27 0 1459628..1460275 - 215 26988013 algF PP_1278 - alginate O-acetyltransferase 1269 63.50 0 1460296..1461462 - 388 26988014 algJ PP_1279 - alginate O-acetylation protein AlgJ 1270 61.52 0 1461465..1462922 - 485 26988015 algI PP_1280 - alginate O-acetylation protein AlgI 1271 63.71 0 1463064..1464179 - 371 26988016 algL PP_1281 - poly(beta-D-mannuronate) lyase 1272 63.40 0 1464176..1465615 - 479 26988017 algX PP_1282 - alginate biosynthesis protein AlgX 1273 61.83 0 1465629..1467302 - 557 26988018 - PP_1283 - carbohydrate-binding and sugar hydrolysis 1274 65.04 0 1467211..1468689 - 492 26988019 algE PP_1284 - outer membrane protein AlgE 1275 65.70 0 1468686..1470140 - 484 26988020 algK PP_1285 - Sel1 domain protein repeat-containing protein 1276 64.35 0 1470130..1471296 - 388 26988021 - PP_1286 - type IV pilus assembly PilZ 1277 61.44 0 1471334..1472824 - 496 26988022 - PP_1287 - alginate biosynthesis protein Alg8 1278 62.26 0 1472902..1474218 - 438 26988023 algD PP_1288 - GDP-mannose 6-dehydrogenase 1279 61.41 0 1475019..1475798 - 259 26988024 - PP_1289 - hypothetical protein 1280 62.97 0 1475819..1477063 + 414 26988025 - PP_1290 - polysaccharide deacetylase 1281 61.29 0 1477345..1478739 + 464 26988026 - PP_1291 - PhoH family protein 1282 63.91 0 1478935..1479405 + 156 26988027 moaC PP_1292 - molybdenum cofactor biosynthesis protein C 1283 61.04 0 1479402..1479650 + 82 26988028 moaD PP_1293 - molybdopterin converting factor, subunit 1 1284 63.31 0 1479653..1480099 + 148 26988029 moaE PP_1294 - molybdopterin biosynthesis MoaE protein 1285 63.55 0 1480293..1481735 - 480 161378136 rhlB PP_1295 - ATP-dependent RNA helicase RhlB 1286 61.49 0 1481836..1482492 - 218 26988031 estB PP_1296 - carboxylesterase 1287 62.29 0 1482825..1483853 + 342 26988032 aapJ PP_1297 - general amino acid ABC transporter, periplasmic binding protein 1288 60.22 0 1483921..1485099 + 392 26988033 aapQ PP_1298 - polar amino acid ABC transporter inner membrane subunit 1289 62.39 0 1485110..1486207 + 365 26988034 aapM PP_1299 - polar amino acid ABC transporter inner membrane subunit 1290 61.57 0 1486218..1486982 + 254 26988035 aapP PP_1300 - general amino acid ABC transporter, ATP-binding protein 1291 62.86 0 1487112..1488320 - 402 26988036 algW PP_1301 - 2-alkenal reductase 1292 62.71 0 1488441..1489199 + 252 26988037 - PP_1302 - hypothetical protein 1293 59.80 0 1489402..1490319 + 305 26988038 cysD PP_1303 - sulfate adenylyltransferase subunit 2 1294 63.09 0 1490336..1492237 + 633 26988039 cysNC PP_1304 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 1295 41.29 -2 1492332..1492595 - 87 26988040 - PP_1305 - Pyocin S-type immunity protein, putative 1296 55.03 -1 1492592..1494868 - 758 26988041 - PP_1306 - pyocin S-type Killer domain-containing protein 1297 59.17 0 1494963..1495442 - 159 26988042 - PP_1307 - AsnC family transcriptional regulator 1298 61.65 0 1495570..1496766 + 398 26988043 mdeA PP_1308 - methionine gamma-lyase 1299 61.19 0 1496838..1497275 - 145 26988044 - PP_1309 - hypothetical protein 1300 64.94 0 1497411..1498046 + 211 26988045 - PP_1310 - hypothetical protein 1301 64.30 0 1498072..1499421 + 449 26988046 - PP_1311 - tryptophanyl-tRNA synthetase 1302 59.91 0 1499583..1500677 + 364 26988047 - PP_1312 - AFG1-family ATPase 1303 60.91 0 1500784..1501704 - 306 26988048 - PP_1313 - AraC family transcriptional regulator 1304 64.36 0 1501895..1502935 - 346 26988049 - PP_1314 - aldo/keto reductase family oxidoreductase 1305 54.08 -1 1503194..1503622 + 142 26988050 rplM PP_1315 - 50S ribosomal protein L13 1306 57.76 -1 1503637..1504029 + 130 26988051 rpsI PP_1316 - 30S ribosomal protein S9 1307 63.47 0 1504292..1504885 + 197 26988052 petA PP_1317 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 1308 57.59 -1 1504885..1506096 + 403 26988053 petB PP_1318 - ubiquinol--cytochrome c reductase, cytochrome b 1309 56.92 -1 1506096..1506875 + 259 26988054 petC PP_1319 - ubiquinol--cytochrome c reductase, cytochrome c1 1310 60.74 0 1506992..1507615 + 207 26988055 sspA PP_1320 - stringent starvation protein A 1311 58.23 0 1507596..1508057 + 153 26988056 sspB PP_1321 - ClpXP protease specificity-enhancing factor 1312 61.31 0 1508119..1508697 - 192 26988057 - PP_1322 - transport-associated protein 1313 61.56 0 1508694..1509281 - 195 26988058 gmhA PP_1323 - phosphoheptose isomerase 1314 61.60 0 1509374..1509748 - 124 26988059 - PP_1324 - hypothetical protein 1315 67.60 +1 1509745..1511562 - 605 26988060 - PP_1325 - LppC family lipoprotein 1316 64.63 0 1511740..1512624 + 294 26988061 - PP_1326 - uroporphyrin-III C/tetrapyrrole methyltransferase 1317 59.07 0 1513358..1513831 + 157 26988062 - PP_1328 - cell division protein MraZ 1318 63.08 0 1513828..1514775 + 315 26988063 mraW PP_1329 - S-adenosyl-methyltransferase MraW 1319 59.18 0 1514772..1515065 + 97 26988064 ftsL PP_1330 - cell division protein FtsL 1320 63.75 0 1515062..1516810 + 582 26988065 ftsI PP_1331 - peptidoglycan glycosyltransferase 1321 63.11 0 1516807..1518297 + 496 26988066 murE PP_1332 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 1322 62.43 0 1518290..1519657 + 455 26988067 murF PP_1333 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 1323 61.31 0 1519657..1520739 + 360 26988068 mraY PP_1334 - phospho-N-acetylmuramoyl-pentapeptide-transferase 1324 64.60 0 1520740..1522092 + 450 26988069 murD PP_1335 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1325 62.39 0 1522089..1523303 + 404 26988070 ftsW PP_1336 - cell division protein FtsW 1326 65.00 0 1523293..1524372 + 359 26988071 murG PP_1337 - N-acetylglucosaminyl transferase 1327 64.60 0 1524365..1525813 + 482 26988072 murC PP_1338 - UDP-N-acetylmuramate--L-alanine ligase 1328 63.74 0 1525810..1526766 + 318 26988073 ddl PP_1339 - D-alanine--D-alanine ligase 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.