version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1205 65.33 0 1393014..1393538 + 174 26987950 ruvC PP_1215 - Holliday junction resolvase 1206 62.94 0 1393648..1394265 + 205 26987951 ruvA PP_1216 - Holliday junction DNA helicase motor protein 1207 64.57 0 1394262..1395308 + 348 26987952 ruvB PP_1217 - Holliday junction DNA helicase B 1208 60.49 0 1395434..1395886 + 150 26987953 - PP_1218 - hypothetical protein 1209 62.79 0 1395889..1396584 + 231 26987954 tolQ PP_1219 - biopolymer transport protein TolQ 1210 59.82 0 1396599..1397051 + 150 26987955 tolR PP_1220 - biopolymer transport protein TolR 1211 60.59 0 1397051..1398169 + 372 26987956 tolA PP_1221 - biopolymer transport protein TolA 1212 59.98 0 1398166..1399467 + 433 26987957 tolB PP_1222 - translocation protein TolB 1213 59.28 0 1399522..1400022 + 166 26987958 oprL PP_1223 - peptidoglycan-associated lipoprotein OprL 1214 60.97 0 1400029..1400835 + 268 26987959 - PP_1224 - hypothetical protein 1215 59.88 0 1401004..1401651 + 215 26987960 - PP_1225 - radical SAM domain protein 1216 63.41 0 1401669..1402343 + 224 26987961 exsB PP_1226 - exsB protein 1217 61.67 0 1402573..1403532 - 319 26987962 - PP_1227 - cation efflux protein 1218 65.65 0 1403613..1405679 - 688 26987963 - PP_1228 - methyl-accepting chemotaxis transducer 1219 61.71 0 1405746..1407098 - 450 26987964 - PP_1229 - amino acid ABC transporter permease 1220 62.29 0 1407546..1409054 + 502 26987965 - PP_1230 - hypothetical protein 1221 62.80 0 1409329..1410387 + 352 26987966 nadA PP_1231 - quinolinate synthetase 1222 63.19 0 1410496..1411932 - 478 26987967 - PP_1232 - hypothetical protein 1223 62.08 0 1412055..1412294 + 79 26987968 - PP_1233 - SirA family protein 1224 61.34 0 1412315..1413385 + 356 26987969 - PP_1234 - hypothetical protein 1225 61.81 0 1413421..1413894 - 157 26987970 - PP_1235 - alkyl hydroperoxide reductase/thiol specific antioxidant/ Mal allergen 1226 65.24 0 1413906..1414466 - 186 26987971 - PP_1236 - glycine cleavage system transcriptional repressor, putative 1227 61.26 0 1414726..1415613 + 295 26987972 dapA PP_1237 - dihydrodipicolinate synthase 1228 65.51 0 1415629..1416750 + 373 26987973 - PP_1238 - putative lipoprotein 1229 63.24 0 1416751..1417509 + 252 26987974 - PP_1239 - beta-lactamase domain protein 1230 59.49 0 1417540..1418250 + 236 26987975 purC PP_1240 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1231 50.14 -2 1418530..1418880 - 116 26987976 - PP_1241 - hypothetical protein 1232 57.04 -1 1419237..1419371 - 44 26987977 - PP_1242 - hypothetical protein 1233 63.16 0 1419478..1419648 + 56 26987978 - PP_1243 - hypothetical protein 1234 57.65 -1 1419645..1420010 - 121 26987979 - PP_1244 - hypothetical protein 1235 63.08 0 1420519..1421409 + 296 26987980 - PP_1245 - hypothetical protein 1236 64.73 0 1421418..1423277 + 619 26987981 - PP_1246 - hypothetical protein 1237 61.07 0 1423207..1424670 - 487 26987982 - PP_1247 - hypothetical protein 1238 61.85 0 1424597..1425364 - 255 26987983 - PP_1248 - amino acid transporter LysE 1239 55.21 -1 1425405..1425596 + 63 26987984 - PP_1249 - hypothetical protein 1240 60.13 0 1426101..1427522 + 473 26987985 - PP_1250 - group II intron-encoding maturase 1241 61.11 0 1427844..1429481 + 545 161378137 mqo-2 PP_1251 - malate:quinone oxidoreductase 1242 60.06 0 1429961..1431382 + 473 26987987 - PP_1252 - group II intron-encoding maturase 1243 60.42 0 1431534..1431869 - 111 26987988 - PP_1253 - ArsR family transcriptional regulator 1244 65.20 0 1431919..1433010 + 363 26987989 xenA PP_1254 - xenobiotic reductase A 1245 65.71 0 1433134..1434381 - 415 26987990 - PP_1255 - FAD dependent oxidoreductase 1246 67.36 +1 1434384..1435961 - 525 26987991 - PP_1256 - ketoglutarate semialdehyde dehydrogenase 1247 65.08 0 1436114..1437061 - 315 26987992 - PP_1257 - dihydrodipicolinate synthase family protein 1248 66.56 +1 1437104..1438030 - 308 26987993 - PP_1258 - proline racemase 1249 64.25 0 1438054..1439667 - 537 26987994 - PP_1259 - amino acid ABC transporter permease 1250 55.38 -1 1440326..1441654 + 442 26987995 - PP_1260 - ISPpu9, transposase 1251 65.44 0 1442086..1443060 - 324 26987996 - PP_1261 - 2-hydroxyacid dehydrogenase 1252 61.39 0 1443236..1444183 - 315 26987997 - PP_1262 - LysR family transcriptional regulator 1253 65.56 0 1444375..1445904 + 509 26987998 - PP_1263 - RND efflux system, outer membrane lipoprotein, NodT family 1254 65.29 0 1445901..1448078 + 725 26987999 - PP_1264 - fusaric acid resistance protein region 1255 62.19 0 1448068..1448268 + 66 26988000 - PP_1265 - hypothetical protein 1256 60.98 0 1448279..1449139 + 286 26988001 - PP_1266 - secretion protein HlyD family protein 1257 54.49 -1 1449212..1449679 - 155 26988002 - PP_1267 - hypothetical protein 1258 56.92 -1 1449676..1450065 - 129 26988003 - PP_1268 - putative regulator PrlF 1259 65.77 0 1450095..1450541 - 148 26988004 - PP_1269 - universal stress protein 1260 63.69 0 1450815..1451720 + 301 26988005 - PP_1270 - LysR family transcriptional regulator 1261 66.28 +1 1451837..1453378 + 513 26988006 - PP_1271 - major facilitator transporter 1262 65.04 0 1453365..1454468 + 367 26988007 - PP_1272 - secretion protein HlyD family protein 1263 65.84 0 1454465..1455919 + 484 26988008 - PP_1273 - RND efflux system, outer membrane lipoprotein, NodT family 1264 67.16 +1 1456168..1456980 - 270 26988009 - PP_1274 - short chain dehydrogenase 1265 64.95 0 1457012..1457476 - 154 26988010 - PP_1275 - hypothetical protein 1266 55.12 -1 1457640..1458098 + 152 26988011 - PP_1276 - hypothetical protein 1267 61.66 0 1458138..1459595 - 485 26988012 algA PP_1277 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1268 63.27 0 1459628..1460275 - 215 26988013 algF PP_1278 - alginate O-acetyltransferase 1269 63.50 0 1460296..1461462 - 388 26988014 algJ PP_1279 - alginate O-acetylation protein AlgJ 1270 61.52 0 1461465..1462922 - 485 26988015 algI PP_1280 - alginate O-acetylation protein AlgI 1271 63.71 0 1463064..1464179 - 371 26988016 algL PP_1281 - poly(beta-D-mannuronate) lyase 1272 63.40 0 1464176..1465615 - 479 26988017 algX PP_1282 - alginate biosynthesis protein AlgX 1273 61.83 0 1465629..1467302 - 557 26988018 - PP_1283 - carbohydrate-binding and sugar hydrolysis 1274 65.04 0 1467211..1468689 - 492 26988019 algE PP_1284 - outer membrane protein AlgE 1275 65.70 0 1468686..1470140 - 484 26988020 algK PP_1285 - Sel1 domain protein repeat-containing protein 1276 64.35 0 1470130..1471296 - 388 26988021 - PP_1286 - type IV pilus assembly PilZ 1277 61.44 0 1471334..1472824 - 496 26988022 - PP_1287 - alginate biosynthesis protein Alg8 1278 62.26 0 1472902..1474218 - 438 26988023 algD PP_1288 - GDP-mannose 6-dehydrogenase 1279 61.41 0 1475019..1475798 - 259 26988024 - PP_1289 - hypothetical protein 1280 62.97 0 1475819..1477063 + 414 26988025 - PP_1290 - polysaccharide deacetylase 1281 61.29 0 1477345..1478739 + 464 26988026 - PP_1291 - PhoH family protein 1282 63.91 0 1478935..1479405 + 156 26988027 moaC PP_1292 - molybdenum cofactor biosynthesis protein C 1283 61.04 0 1479402..1479650 + 82 26988028 moaD PP_1293 - molybdopterin converting factor, subunit 1 1284 63.31 0 1479653..1480099 + 148 26988029 moaE PP_1294 - molybdopterin biosynthesis MoaE protein 1285 63.55 0 1480293..1481735 - 480 161378136 rhlB PP_1295 - ATP-dependent RNA helicase RhlB 1286 61.49 0 1481836..1482492 - 218 26988031 estB PP_1296 - carboxylesterase 1287 62.29 0 1482825..1483853 + 342 26988032 aapJ PP_1297 - general amino acid ABC transporter, periplasmic binding protein 1288 60.22 0 1483921..1485099 + 392 26988033 aapQ PP_1298 - polar amino acid ABC transporter inner membrane subunit 1289 62.39 0 1485110..1486207 + 365 26988034 aapM PP_1299 - polar amino acid ABC transporter inner membrane subunit 1290 61.57 0 1486218..1486982 + 254 26988035 aapP PP_1300 - general amino acid ABC transporter, ATP-binding protein 1291 62.86 0 1487112..1488320 - 402 26988036 algW PP_1301 - 2-alkenal reductase 1292 62.71 0 1488441..1489199 + 252 26988037 - PP_1302 - hypothetical protein 1293 59.80 0 1489402..1490319 + 305 26988038 cysD PP_1303 - sulfate adenylyltransferase subunit 2 1294 63.09 0 1490336..1492237 + 633 26988039 cysNC PP_1304 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 1295 41.29 -2 1492332..1492595 - 87 26988040 - PP_1305 - Pyocin S-type immunity protein, putative 1296 55.03 -1 1492592..1494868 - 758 26988041 - PP_1306 - pyocin S-type Killer domain-containing protein 1297 59.17 0 1494963..1495442 - 159 26988042 - PP_1307 - AsnC family transcriptional regulator 1298 61.65 0 1495570..1496766 + 398 26988043 mdeA PP_1308 - methionine gamma-lyase 1299 61.19 0 1496838..1497275 - 145 26988044 - PP_1309 - hypothetical protein 1300 64.94 0 1497411..1498046 + 211 26988045 - PP_1310 - hypothetical protein 1301 64.30 0 1498072..1499421 + 449 26988046 - PP_1311 - tryptophanyl-tRNA synthetase 1302 59.91 0 1499583..1500677 + 364 26988047 - PP_1312 - AFG1-family ATPase 1303 60.91 0 1500784..1501704 - 306 26988048 - PP_1313 - AraC family transcriptional regulator 1304 64.36 0 1501895..1502935 - 346 26988049 - PP_1314 - aldo/keto reductase family oxidoreductase 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0