version 1.0
Pseudomonas putida KT2440, complete genome - 1..6181863 5350 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 954 55.00 -1 1102977..1103216 + 79 26987699 ttg2F PP_0963 - BolA family protein 955 62.16 0 1103240..1104505 + 421 26987700 murA PP_0964 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 956 61.95 0 1104597..1105232 + 211 26987701 hisG PP_0965 - ATP phosphoribosyltransferase catalytic subunit 957 63.88 0 1105519..1106844 + 441 26987702 hisD PP_0966 - histidinol dehydrogenase 958 62.37 0 1106847..1107893 + 348 26987703 hisC PP_0967 - histidinol-phosphate aminotransferase 959 59.26 0 1108009..1109250 - 413 26987704 - PP_0968 - hypothetical protein 960 64.36 0 1109333..1109983 + 216 26987705 - PP_0969 - GntR family transcriptional regulator 961 64.37 0 1109973..1111277 + 434 26987706 - PP_0970 - cyanate transporter 962 61.01 0 1111387..1111863 + 158 26987707 - PP_0971 - hypothetical protein 963 63.21 0 1111880..1112197 + 105 26987708 - PP_0972 - GIY-YIG nuclease superfamily protein 964 60.52 0 1112145..1113152 - 335 26987709 ndpA PP_0973 - nucleoid-associated protein NdpA 965 49.70 -2 1113202..1113531 + 109 26987710 - PP_0974 - hypothetical protein 966 57.09 -1 1113522..1113803 + 93 26987711 hupN PP_0975 - histone family protein DNA-binding protein 967 63.63 0 1113851..1114804 - 317 26987712 - PP_0976 - putative SAM-dependent methyltransferase 968 62.03 0 1114983..1117829 - 948 26987713 valS PP_0977 - valyl-tRNA synthetase 969 64.21 0 1117913..1118278 - 121 26987714 - PP_0978 - hypothetical protein 970 62.24 0 1118284..1118712 - 142 26987715 holC PP_0979 - DNA polymerase III subunit chi 971 64.52 0 1118763..1120256 - 497 26987716 pepA PP_0980 - leucyl aminopeptidase 972 60.94 0 1120241..1120432 - 63 26987717 - PP_0981 - hypothetical protein 973 64.70 0 1120558..1121673 + 371 26987718 - PP_0982 - permease YjgP/YjgQ family protein 974 62.05 0 1121666..1122727 + 353 26987719 - PP_0983 - permease YjgP/YjgQ family protein 975 60.33 0 1122874..1123362 - 162 26987720 - PP_0984 - RDD domain containing protein 976 51.20 -2 1123452..1123949 - 165 26987721 - PP_0985 - cold-shock domain-contain protein 977 63.10 0 1124019..1125140 - 373 26987722 gcvT-1 PP_0986 - glycine cleavage system T protein 978 65.29 0 1125168..1126544 - 458 26987723 sda-2 PP_0987 - L-serine dehydratase 1 979 65.34 0 1126693..1129548 - 951 26987724 gcvP-1 PP_0988 - glycine dehydrogenase 980 60.16 0 1129560..1129943 - 127 26987725 gcvH PP_0989 - glycine cleavage system protein H 981 61.76 0 1130247..1130633 - 128 26987726 - PP_0990 - DoxX family protein 982 63.31 0 1130707..1131480 - 257 26987727 - PP_0991 - hypothetical protein 983 59.59 0 1131477..1132310 - 277 26987728 - PP_0992 - hypothetical protein 984 63.54 0 1132327..1132614 - 95 26987729 - PP_0993 - hypothetical protein 985 58.29 0 1132838..1133422 + 194 161378140 - PP_0994 - RNA polymerase sigma factor 986 65.73 0 1133412..1134053 + 213 26987731 - PP_0995 - hypothetical protein 987 56.14 -1 1134131..1135336 - 401 26987732 gltS PP_0996 - sodium/glutamate symporter 988 65.08 0 1135464..1136972 - 502 26987733 - PP_0997 - sigma-54 dependent transcriptional regulator/sensory box protein 989 55.94 -1 1137113..1137541 - 142 26987734 - PP_0998 - hypothetical protein 990 62.26 0 1137538..1138467 - 309 26987735 arcC PP_0999 - carbamate kinase 991 59.74 0 1138632..1139642 - 336 26987736 argI PP_1000 - ornithine carbamoyltransferase 992 61.96 0 1139712..1140965 - 417 26987737 arcA PP_1001 - arginine deiminase 993 61.27 0 1140999..1142426 - 475 26987738 arcD PP_1002 - arginine/ornithine antiporter 994 62.89 0 1142863..1144290 + 475 26987739 - PP_1003 - arginine/ornithine antiporter 995 64.25 0 1144270..1144683 - 137 26987740 - PP_1004 - hypothetical protein 996 66.84 +1 1144738..1145331 - 197 26987741 hemO PP_1005 - heme oxygenase 997 60.83 0 1145472..1147751 - 759 26987742 - PP_1006 - TonB-dependent hemoglobin/transferrin/lactoferrin family receptor 998 66.10 +1 1148187..1149242 - 351 26987743 - PP_1007 - anti-FecI sigma factor, FecR 999 62.18 0 1149239..1149751 - 170 26987744 - PP_1008 - ECF subfamily RNA polymerase sigma factor 1000 63.87 0 1150008..1151009 - 333 26987745 gap-1 PP_1009 - glyceraldehyde-3-phosphate dehydrogenase, type I 1001 66.17 +1 1151274..1153100 + 608 26987746 edd PP_1010 - phosphogluconate dehydratase 1002 64.06 0 1153097..1154056 + 319 26987747 glk PP_1011 - glucokinase 1003 64.46 0 1154135..1154860 + 241 26987748 gltR-2 PP_1012 - winged helix family two component transcriptional regulator 1004 64.95 0 1154841..1156295 + 484 26987749 - PP_1013 - integral membrane sensor signal transduction histidine kinase 1005 64.91 0 1156511..1157761 + 416 26987750 - PP_1014 - hypothetical protein 1006 61.15 0 1157866..1159152 + 428 26987751 - PP_1015 - sugar ABC transporter, periplasmic sugar-binding protein 1007 64.03 0 1159286..1160194 + 302 26987752 - PP_1016 - binding-protein-dependent transport systems inner membrane component 1008 61.23 0 1160187..1161032 + 281 26987753 - PP_1017 - binding-protein-dependent transport systems inner membrane component 1009 63.98 0 1161036..1162190 + 384 26987754 - PP_1018 - sugar ABC transporter, ATP-binding subunit 1010 61.31 0 1162231..1163574 + 447 26987755 oprB-1 PP_1019 - porin B 1011 66.32 +1 1163692..1164546 + 284 26987756 - PP_1020 - aldose 1-epimerase 1012 65.06 0 1164539..1165411 - 290 161378139 hexR PP_1021 - DNA-binding transcriptional regulator HexR 1013 62.24 0 1165614..1167083 + 489 26987758 zwf-1 PP_1022 - glucose-6-phosphate 1-dehydrogenase 1014 65.98 +1 1167055..1167783 + 242 26987759 pgl PP_1023 - 6-phosphogluconolactonase 1015 61.72 0 1167774..1168481 + 235 26987760 eda PP_1024 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1016 61.71 0 1168734..1170407 - 557 26987761 leuA PP_1025 - 2-isopropylmalate synthase 1017 65.34 0 1170840..1171667 - 275 26987762 - PP_1026 - M24/M37 family peptidase 1018 67.54 +1 1171671..1173050 - 459 26987763 xseA PP_1027 - exodeoxyribonuclease VII large subunit 1019 63.14 0 1173145..1174023 - 292 26987764 - PP_1028 - LysR family transcriptional regulator 1020 61.77 0 1174121..1174876 + 251 26987765 - PP_1029 - hypothetical protein 1021 61.47 0 1174924..1175481 + 185 26987766 - PP_1030 - hypothetical protein 1022 62.86 0 1175568..1177037 + 489 26987767 guaB PP_1031 - inositol-5-monophosphate dehydrogenase 1023 63.12 0 1177116..1178693 + 525 26987768 guaA PP_1032 - bifunctional GMP synthase/glutamine amidotransferase protein 1024 52.94 -2 1178787..1180775 - 662 26987769 - PP_1033 - sulfatase domain-containing protein 1025 63.18 0 1180946..1182352 + 468 26987770 cumA PP_1034 - multicopper oxidase 1026 67.58 +1 1182394..1182831 + 145 26987771 cumB PP_1035 - cumB protein 1027 62.22 0 1182925..1184274 - 449 26987772 - PP_1036 - ligand-binding/transglycosylase domain-containing protein 1028 64.92 0 1184794..1188693 + 1299 26987773 purL PP_1037 - phosphoribosylformylglycinamidine synthase 1029 66.03 +1 1188697..1189008 + 103 26987774 - PP_1038 - hypothetical protein 1030 61.81 0 1189050..1189811 - 253 26987775 tatC-1 PP_1039 - Sec-independent protein translocase, TatC subunit 1031 67.35 +1 1189808..1190098 - 96 26987776 - PP_1040 - twin-arginine translocation protein, TatB subunit 1032 59.83 0 1190098..1190331 - 77 26987777 tatA-1 PP_1041 - twin-arginine translocation protein, TatA/E family subunit 1033 66.36 +1 1190477..1191442 + 321 26987778 xcpX PP_1042 - general secretion pathway protein K 1034 64.74 0 1191572..1193647 - 691 26987779 uxpB PP_1043 - hypothetical protein 1035 68.60 +1 1193860..1195512 + 550 26987780 uxpA PP_1044 - lipoprotein UxpA 1036 69.95 +2 1195509..1195934 + 141 26987781 xcpP PP_1045 - type II secretion pathway protein XcpP 1037 64.67 0 1195938..1197692 + 584 26987782 xcpQ PP_1046 - general secretion pathway protein D 1038 66.25 +1 1197689..1199140 + 483 26987783 xcpR PP_1047 - type II secretion system protein E 1039 67.58 +1 1199144..1200346 + 400 26987784 xcpS-1 PP_1048 - general secretion pathway protein F 1040 63.82 0 1200343..1200798 + 151 26987785 xcpT-1 PP_1049 - general secretion pathway protein G 1041 71.06 +2 1200802..1201233 + 143 26987786 xcpU PP_1050 - general secretion pathway protein H 1042 64.95 0 1201191..1201598 + 135 26987787 xcpV PP_1051 - type II secretion system protein I/J 1043 67.17 +1 1201595..1202185 + 196 26987788 xcpW PP_1052 - type II secretion pathway protein XcpW 1044 66.85 +1 1202170..1203258 + 362 26987789 xcpY PP_1053 - general secretion pathway protein L 1045 65.12 0 1203255..1203641 + 128 26987790 xcpZ PP_1054 - type II secretion pathway protein XcpZ 1046 64.96 0 1203656..1204300 + 214 26987791 gspN PP_1055 - type II secretion pathway protein GspN 1047 64.96 0 1204460..1205221 - 253 26987792 - PP_1056 - iron-chelator utilization protein, putative 1048 64.65 0 1205214..1205759 - 181 26987793 - PP_1057 - PadR family transcriptional regulator 1049 62.73 0 1205849..1208998 - 1049 26987794 - PP_1058 - hypothetical protein 1050 62.09 0 1209390..1210808 + 472 26987795 - PP_1059 - amino acid permease-associated region 1051 63.15 0 1210845..1212464 - 539 26987796 - PP_1060 - glutamate synthase, large subunit, putative 1052 65.39 0 1212652..1216956 - 1434 26987797 - PP_1061 - DEAD/H associated domain protein 1053 67.15 +1 1217093..1217506 + 137 26987798 - PP_1062 - NUDIX hydrolase 61.83 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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