version 1.0
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome - 1..1751080 1883 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3 33.62 0 2082..4487 + 801 33239455 purL Pro0003 - phosphoribosylformylglycinamidine synthase II 4 33.47 0 4530..5987 + 485 33239456 purF Pro0004 - amidophosphoribosyltransferase 5 31.52 -1 5992..8478 - 828 33239457 gyrA Pro0005 - Type IIA topoisomerase, A subunit, ParC 6 29.79 -1 8558..9433 - 291 33239458 - Pro0006 - TPR repeat-containing protein 7 33.23 0 9433..10395 - 320 33239459 - Pro0007 - hypothetical protein 8 36.27 0 10521..11270 + 249 33239460 - Pro0008 - hypothetical protein 9 31.45 -1 11292..11927 + 211 33239461 nusB Pro0009 - transcription antitermination protein NusB 10 34.88 0 11966..13261 + 431 33239462 ftsY Pro0010 - Signal recognition particle GTPase, FtsY 11 37.23 0 13310..14719 + 469 33239463 rsbU Pro0011 - Serine phosphatase RsbU 12 34.13 0 14770..16158 + 462 33239464 argH Pro0012 - argininosuccinate lyase 13 60.08 +2 16279..17037 + 252 33239465 - Pro0013 - RNA-binding protein 14 34.83 0 17049..18050 - 333 33239466 - Pro0014 - tRNA-dihydrouridine synthase A 15 37.52 0 18102..18602 + 166 33239467 - Pro0015 - hypothetical protein 16 36.35 0 18707..19435 + 242 33239468 grpE Pro0016 - molecular chaperone GrpE, heat shock protein 17 40.19 0 19481..20617 + 378 33239469 dnaJ Pro0017 - DnaJ-class molecular chaperone 18 31.17 -1 20617..20847 + 76 33239470 sirA Pro0018 - redox protein 19 30.43 -1 20834..21763 + 309 33239471 - Pro0019 - GTPase 20 40.80 0 21747..22094 - 115 33239472 - Pro0020 - hypothetical protein 21 36.72 0 22128..23012 - 294 33239473 murB Pro0021 - UDP-N-acetylmuramate dehydrogenase 22 31.29 -1 23017..24435 - 472 33239474 murC Pro0022 - UDP-N-acetylmuramate-alanine ligase 23 38.71 0 24618..25640 + 340 33239475 gap2 Pro0023 - glyceraldehyde 3-phosphate dehydrogenase(NADP+)(phosphorylating) 24 38.52 0 25676..26677 - 333 33239476 thiL Pro0024 - thiamine monophosphate kinase 25 35.65 0 26670..27746 - 358 33239477 ppiB Pro0025 - cyclophilin-type peptidyl-prolyl cis-trans isomerase 26 39.22 0 27810..28370 + 186 33239478 efp Pro0026 - elongation factor P 27 40.70 0 28376..28891 + 171 33239479 accB Pro0027 - biotin carboxyl carrier protein 28 37.90 0 28895..29923 - 342 33239480 pdxA Pro0028 - 4-hydroxythreonine-4-phosphate dehydrogenase 29 34.69 0 29973..30119 + 48 33239481 - Pro0029 - hypothetical protein 30 38.37 0 30137..31030 - 297 33239482 wcaG Pro0030 - NAD dependent epimerase/dehydratase 31 35.59 0 31062..31283 + 73 33239483 - Pro0031 - hypothetical protein 32 36.39 0 31287..31679 - 130 33239484 mcrA Pro0032 - McrA/HNH family nuclease 33 36.74 0 31805..32068 - 87 33239485 - Pro0033 - hypothetical protein 34 32.26 -1 32121..32492 + 123 33239486 - Pro0034 - hypothetical protein 35 36.81 0 32863..33150 + 95 33239487 - Pro0035 - hypothetical protein 36 34.55 0 33189..34343 - 384 33239488 - Pro0036 - soluble hydrogenase small subunit 37 35.25 0 34418..35563 + 381 33239489 cbiD Pro0037 - cobalt-precorrin-6A synthase 38 37.74 0 35617..37203 + 528 33239490 guaA Pro0038 - bifunctional GMP synthase/glutamine amidotransferase protein 39 39.38 0 38158..38769 + 203 33239491 - Pro0039 - hypothetical protein 40 32.78 -1 38779..39138 + 119 33239492 - Pro0040 - hypothetical protein 41 36.13 0 39169..40956 + 595 33239493 ftsI Pro0041 - putative penicillin-binding protein 42 34.19 0 40976..41209 - 77 33239494 - Pro0042 - hypothetical protein 43 39.70 0 41413..41946 - 177 33239495 - Pro0043 - putative reductase 44 36.80 0 41993..43837 - 614 33239496 dfa3 Pro0044 - diflavin flavoprotein 45 38.30 0 43837..45609 - 590 33239497 dfa1 Pro0045 - diflavin flavoprotein 46 35.63 0 45725..46594 - 289 33239498 - Pro0046 - hypothetical protein 47 36.88 0 46600..49788 - 1062 33239499 hepA Pro0047 - SNF2 family DNA/RNA helicase 48 38.86 0 49984..52662 + 892 33239500 alaS Pro0048 - alanyl-tRNA synthetase 49 37.65 0 52665..54611 - 648 33239501 speA Pro0049 - arginine decarboxylase 50 39.57 0 54704..55216 + 170 33239502 ndk Pro0050 - nucleoside diphosphate kinase 51 38.81 0 55259..56371 - 370 33239503 dadA Pro0051 - glycine/D-amino acid oxidase family protein 52 36.04 0 56478..57956 + 492 33239504 gatB Pro0052 - aspartyl/glutamyl-tRNA amidotransferase subunit B 53 30.17 -1 57964..58596 - 210 33239505 coaE Pro0053 - dephospho-CoA kinase 54 38.08 0 58642..59883 + 413 33239506 argJ Pro0054 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 55 42.34 +1 60286..60918 + 210 33239507 hupE Pro0055 - hydrogenase accessory membrane protein 56 32.46 -1 61067..62899 - 610 33239508 mdlB Pro0056 - ABC-type multidrug transport system ATPase and permease components 57 31.05 -1 63339..64562 + 407 33239509 rfaG Pro0057 - glycosyltransferase 58 31.25 -1 64567..66531 - 654 33239510 asnB Pro0058 - asparagine synthetase 59 30.21 -1 66592..68190 + 532 33239511 arnT Pro0059 - glycosyl transferase family protein 60 34.27 0 68269..69663 + 464 33239512 wcaA Pro0060 - glycosyltransferase 61 31.32 -1 69664..70605 + 313 33239513 - Pro0061 - hypothetical protein 62 29.96 -1 70715..73054 + 779 33239514 arnT Pro0062 - glycosyl transferase family protein 63 38.83 0 73141..74268 + 375 33239515 gmd Pro0063 - GDP-D-mannose dehydratase 64 32.15 -1 74274..75287 + 337 33239516 wcaG Pro0064 - NAD dependent epimerase/dehydratase 65 33.25 0 75660..76808 + 382 33239517 - Pro0065 - putative RNA methylase 66 33.85 0 76805..77191 - 128 33239518 - Pro0066 - hypothetical protein 67 39.78 0 77192..77656 - 154 33239519 - Pro0067 - hypothetical protein 68 43.94 +1 77901..78032 + 43 33239520 - Pro0068 - hypothetical protein 69 26.57 -2 78177..78383 + 68 33239521 - Pro0069 - hypothetical protein 70 40.42 0 78441..78821 + 126 33239522 - Pro0070 - hypothetical protein 71 36.88 0 78939..82493 + 1184 33239523 smc Pro0071 - chromosome segregation ATPase 72 37.24 0 82558..83631 + 357 33239524 - Pro0072 - PRC-barrel domain-containing protein 73 35.96 0 83662..84957 - 431 33239525 - Pro0073 - hypothetical protein 74 40.81 0 85161..86510 + 449 33239526 accC Pro0074 - acetyl-CoA carboxylase biotin carboxylase subunit 75 34.89 0 86523..86843 - 106 33239527 - Pro0075 - YGGT family membrane protein 76 47.62 +2 86930..87097 + 55 33239528 psbX Pro0076 - photosystem II protein X PsbX 77 40.79 0 87184..88242 + 352 33239529 - Pro0077 - hypothetical protein 78 38.96 0 88280..88528 - 82 33239530 hli5 Pro0078 - high light inducible protein hli5 79 33.03 0 88537..90525 - 662 33239531 - Pro0079 - ABC transporter ATP-binding protein 80 36.26 0 90732..91073 - 113 33239532 hit Pro0080 - HIT family hydrolase 81 36.76 0 91268..91879 - 203 33239533 def Pro0081 - peptide deformylase 82 33.84 0 91942..93900 + 652 33239534 DAP2 Pro0082 - dipeptidyl aminopeptidase family protein 83 32.93 -1 93897..95150 - 417 33239535 csdB Pro0083 - selenocysteine lyase 84 29.80 -1 95159..96376 - 405 33239536 sufB Pro0084 - ABC-type transport system involved in Fe-S cluster assembly permease component 85 32.58 -1 96384..97175 - 263 33239537 sufC Pro0085 - ABC-type transport system involved in Fe-S cluster assembly ATPase component 86 33.89 0 97172..98614 - 480 33239538 sufB Pro0086 - cysteine desulfurase activator complex subunit SufB 87 36.77 0 98697..99074 + 125 33239539 - Pro0087 - hypothetical protein 88 39.16 0 99371..100468 + 365 33239540 - Pro0088 - hypothetical protein 89 40.94 0 100490..100660 + 56 33239541 - Pro0089 - hypothetical protein 90 39.06 0 100718..102376 + 552 33239542 pgm Pro0090 - phosphoglucomutase 91 38.93 0 102410..103750 + 446 33239543 mGS1 Pro0091 - recombination factor protein RarA 92 31.35 -1 103816..104472 - 218 33239544 - Pro0092 - putative 4'-phosphopantetheinyl transferase family protein 93 35.26 0 104471..104938 + 155 33239545 ccp Pro0093 - peroxiredoxin 94 38.46 0 104886..105626 - 246 33239546 - Pro0094 - transcriptional regulator 95 36.86 0 105629..106393 - 254 33239547 cysH Pro0095 - phosphoadenosine phosphosulfate reductase 96 35.78 0 106440..107624 + 394 33239548 ndh Pro0096 - NADH dehydrogenase, FAD-containing subunit 97 39.70 0 107726..109546 + 606 33239549 citT Pro0097 - putative sodium/sulfate transporter, DASS family 98 37.46 0 109600..111003 + 467 33239550 trkG Pro0098 - putative sodium transporter, Trk family 99 40.71 0 111000..111731 + 243 33239551 trkA Pro0099 - putative potassium channel, VIC family 100 38.01 0 111732..112865 + 377 33239552 anmK Pro0100 - anhydro-N-acetylmuramic acid kinase 101 42.67 +1 112874..113173 - 99 33239553 - Pro0101 - hypothetical protein 102 39.34 0 113338..113703 + 121 33239554 - Pro0102 - hypothetical protein 37.01 MEAN 3.99 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.