version 1.0
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome - 1..1751080 1883 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 384 39.78 0 370779..371228 + 149 33239836 aroQ Pro0384 - 3-dehydroquinate dehydratase 385 37.24 0 371225..371839 + 204 33239837 miaE Pro0385 - hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 386 32.57 -1 371843..372628 + 261 33239838 cobF Pro0386 - precorrin-2 methylase 387 39.41 0 372703..373179 + 158 33239839 - Pro0387 - hypothetical protein 388 40.99 0 373321..374691 + 456 33239840 engA Pro0388 - GTP-binding protein EngA 389 35.62 0 374696..375613 + 305 33239841 cbiQ Pro0389 - cobalt ABC transporter permease 390 40.29 0 375745..376017 + 90 33239842 - Pro0390 - hypothetical protein 391 37.50 0 376037..376660 + 207 33239843 - Pro0391 - TIM-barrel fold family protein 392 43.16 +1 376833..377402 + 189 33239844 - Pro0392 - hypothetical protein 393 41.18 +1 377412..378239 + 275 33239845 proC Pro0393 - pyrroline-5-carboxylate reductase 394 37.91 0 378246..379403 - 385 33239846 rfaG Pro0394 - putative glycosyl transferase, group 1 395 40.21 0 379491..380261 - 256 33239847 recO Pro0395 - putative recombination protein O 396 36.52 0 380258..380947 - 229 33239848 deoC Pro0396 - deoxyribose-phosphate aldolase 397 39.63 0 380947..381534 - 195 33239849 - Pro0397 - ribosome-associated protein Y 398 37.04 0 381560..382234 + 224 33239850 lipB Pro0398 - lipoate-protein ligase B 399 39.60 0 382270..384297 + 675 33239851 fAA1 Pro0399 - putative long-chain-fatty-acid--CoA ligase 400 39.64 0 384365..384808 + 147 33239852 - Pro0400 - hypothetical protein 401 42.95 +1 384875..386257 + 460 33239853 aceF Pro0401 - branched-chain alpha-keto acid dehydrogenase subunit E2 402 41.15 +1 386308..387420 + 370 33239854 queA Pro0402 - S-adenosylmethionine:tRNA-ribosyltransferase-isomerase 403 42.15 +1 387417..388403 - 328 33239855 cysK Pro0403 - O-acetylserine (thiol)-lyase A 404 39.92 0 388492..389964 - 490 33239856 metC/metB Pro0404 - putative cystathionine gamma-synthase 405 39.15 0 389961..391130 - 389 33239857 metC/metB Pro0405 - putative cystathionine gamma-synthase 406 30.78 -1 391296..392276 - 326 33239858 - Pro0406 - hypothetical protein 407 34.57 0 392552..392794 + 80 33239859 - Pro0407 - hypothetical protein 408 39.60 0 392945..393247 - 100 33239860 - Pro0408 - hypothetical protein 409 44.66 +1 393478..394086 - 202 33239861 rpsD Pro0409 - 30S ribosomal protein S4 410 41.25 +1 394190..394429 + 79 33239862 - Pro0410 - hypothetical protein 411 36.22 0 394426..394737 + 103 33239863 trxA Pro0411 - thioredoxin family protein 412 40.54 0 394752..396263 + 503 33239864 murE Pro0412 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 413 39.78 0 396275..397468 - 397 33239865 csdB Pro0413 - putative L-cysteine/cystine lyase 414 34.67 0 397549..397773 - 74 33239866 - Pro0414 - hypothetical protein 415 34.52 0 398036..398203 - 55 33239867 - Pro0415 - hypothetical protein 416 34.96 0 398503..398748 + 81 33239868 - Pro0416 - hypothetical protein 417 39.43 0 398766..399011 - 81 33239869 - Pro0417 - NifU-like protein 418 39.70 0 399080..400570 + 496 33239870 mqoA Pro0418 - malate:quinone oxidoreductase 419 38.42 0 400642..402450 + 602 33239871 lepA Pro0419 - GTP-binding protein LepA 420 40.57 0 402761..403630 + 289 33239872 dppC Pro0420 - ABC-type peptide transporter permease component 421 41.59 +1 403671..404360 - 229 33239873 spoU Pro0421 - tRNA/rRNA methyltransferase (SpoU) 422 41.38 +1 404610..405926 + 438 33239874 sun Pro0422 - tRNA and rRNA cytosine-C5-methylase 423 38.39 0 405968..407785 - 605 33239875 mrcB Pro0423 - membrane carboxypeptidase (penicillin-binding protein) 424 41.22 +1 407785..408735 - 316 33239876 chlG Pro0424 - bacteriochlorophyll/chlorophyll a synthase 425 37.18 0 408747..408980 - 77 33239877 - Pro0425 - hypothetical protein 426 39.92 0 409032..409805 + 257 33239878 hisF Pro0426 - imidazoleglycerol-phosphate synthase 427 37.75 0 409919..410620 + 233 33239879 ubiE/menG Pro0427 - methylase 428 35.98 0 410622..411149 - 175 33239880 - Pro0428 - hypothetical protein 429 38.85 0 411284..412045 + 253 33239881 cirA Pro0429 - putative biotin--acetyl-CoA-carboxylase ligase 430 40.09 0 412061..412741 - 226 33239882 salX Pro0430 - ABC transporter ATPase 431 41.46 +1 412751..414325 - 524 33239883 ndhB Pro0431 - NAD(P)H-quinone oxidoreductase subunit 2 432 39.33 0 414514..417132 + 872 33239884 topA Pro0432 - DNA topoisomerase I 433 32.44 -1 417167..417613 + 148 33239885 - Pro0433 - hypothetical protein 434 40.32 0 417619..418305 + 228 33239886 - Pro0434 - hypothetical protein 435 39.28 0 418302..419495 + 397 33239887 cobT Pro0435 - hypothetical protein 436 38.49 0 419524..420531 + 335 33239888 - Pro0436 - periplasmic binding protein 437 37.82 0 420520..421656 - 378 33239889 - Pro0437 - aldo/keto reductase family oxidoreductase 438 36.47 0 421781..422449 + 222 33239890 ribC Pro0438 - riboflavin synthase subunit alpha 439 43.12 +1 422496..422873 - 125 33239891 - Pro0439 - transciptional regulator 440 40.30 0 422970..423572 - 200 33239892 cyoC Pro0440 - cytochrome c oxidase, subunit III 441 40.45 0 423572..425230 - 552 33239893 cyoB Pro0441 - cytochrome c oxidase, subunit I 442 39.33 0 425227..426060 - 277 33239894 cyoA Pro0442 - putative cytochrome c oxidase, subunit 2 443 38.13 0 426296..427234 + 312 33239895 ctaA Pro0443 - hypothetical protein 444 44.01 +1 427227..428228 + 333 33239896 cyoE Pro0444 - putative protoheme IX farnesyltransferase 445 38.17 0 428321..429334 + 337 33239897 ccmA Pro0445 - multidrug ABC transporter 446 36.15 0 429394..430245 + 283 33239898 - Pro0446 - multidrug ABC transporter 447 37.48 0 430263..430769 + 168 33239899 - Pro0447 - hypothetical protein 448 40.31 0 430833..432524 - 563 33239900 groEL Pro0448 - chaperonin GroEL 449 41.95 +1 432666..432839 + 57 33239901 - Pro0449 - hypothetical protein 450 32.84 -1 433289..433489 + 66 33239902 - Pro0450 - hypothetical protein 451 34.81 0 433920..434324 - 134 33239903 - Pro0451 - hypothetical protein 452 40.24 0 434454..435206 - 250 33239904 fabG Pro0452 - short-chain dehydrogenase/reductase family protein 453 40.09 0 435322..436002 + 226 33239905 ispD Pro0453 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 454 42.08 +1 435983..436885 - 300 33239906 ldcA Pro0454 - hypothetical protein 455 37.82 0 436888..437778 - 296 33239907 ubiA Pro0455 - prenyltransferase 456 38.52 0 437834..439510 + 558 33239908 gppA Pro0456 - putative exopolyphosphatase 457 36.65 0 439715..440467 - 250 33239909 cobM Pro0457 - precorrin-4 methylase 458 34.98 0 440464..441375 - 303 33239910 lgt Pro0458 - prolipoprotein diacylglyceryl transferase 459 36.87 0 441398..442330 - 310 33239911 petA Pro0459 - apocytochrome f 460 43.76 +1 442387..442923 - 178 33239912 petC Pro0460 - cytochrome b6-f complex iron-sulfur subunit 461 37.76 0 443074..443367 + 97 110645912 - Pro0461 - hypothetical protein 462 36.79 0 443330..444082 - 250 33239913 tatC Pro0462 - protein secretion component, Tat family 463 38.94 0 444251..444553 - 100 33239914 - Pro0463 - hypothetical protein 464 33.97 0 444591..446306 - 571 33239915 - Pro0464 - RNA-binding protein 465 36.04 0 446371..446925 + 184 33239916 gmk Pro0465 - guanylate kinase 466 34.07 0 446939..447073 - 44 33239917 psaJ Pro0466 - photosystem I reaction center subunit IX 467 43.30 +1 447133..447684 - 183 33239918 psaF Pro0467 - photosystem I PsaF protein (subunit III) 468 39.87 0 447763..448833 + 356 33239919 QRI7 Pro0468 - metal-dependent protease with chaperone activity 469 33.88 0 448872..449054 + 60 33239920 hli9 Pro0469 - high light inducible protein hli9 470 42.52 +1 449249..450445 + 398 33239921 nhaP Pro0470 - putative Na+/H+ antiporter, CPA1 family 471 36.69 0 450465..451895 - 476 33239922 gltX Pro0471 - glutamyl-tRNA synthetase 472 45.50 +2 452157..452345 - 62 33239923 - Pro0472 - hypothetical protein 473 43.89 +1 452517..452999 - 160 33239924 rplS Pro0473 - 50S ribosomal protein L19 474 38.25 0 453066..453248 + 60 33239925 - Pro0474 - hypothetical protein 475 38.11 0 453442..454278 + 278 33239926 map Pro0475 - methionine aminopeptidase 476 33.73 0 454301..455062 - 253 33239927 fabG Pro0476 - short chain dehydrogenase 477 39.59 0 455240..456310 + 356 33239928 pta Pro0477 - phosphotransacetylase domain-containing protein 478 39.69 0 456362..456880 + 172 33239929 - Pro0478 - hypothetical protein 479 35.94 0 456999..457496 + 165 33239930 - Pro0479 - nucleotide-binding protein 480 35.21 0 457554..457766 + 70 33239931 - Pro0480 - hypothetical protein 481 38.52 0 457853..458662 + 269 33239932 hflC Pro0481 - Band 7 protein 482 44.32 +1 458766..460067 - 433 33239933 hemL Pro0482 - glutamate-1-semialdehyde aminotransferase 483 37.18 0 460386..461216 - 276 33239934 xthA Pro0483 - exonuclease III 37.01 MEAN 3.99 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0