version 1.0
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome - 1..1751080 1883 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 294 39.15 0 285201..285956 + 251 33239746 sfsA Pro0294 - putative sugar fermentation stimulation protein 295 45.26 +2 286257..287765 + 502 33239747 amtB Pro0295 - ammonium transporter 296 37.27 0 287863..289080 + 405 33239748 lytB Pro0296 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 297 39.54 0 289209..289772 + 187 33239749 - Pro0297 - hypothetical protein 298 36.42 0 289813..291369 - 518 33239750 purH Pro0298 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 299 35.64 0 291429..292034 + 201 33239751 - Pro0299 - esterase 300 41.19 +1 292047..292415 - 122 33239752 - Pro0300 - hypothetical protein 301 38.61 0 292769..293887 + 372 33239753 caeS Pro0301 - two-component sensor histidine kinase 302 35.00 0 293868..294647 - 259 33239754 cobS Pro0302 - cobalamin-5-phosphate synthase 303 40.21 0 294742..295860 + 372 33239755 tgt Pro0303 - queuine/archaeosine tRNA-ribosyltransferase 304 47.92 +2 295894..296037 + 47 33239756 psbK Pro0304 - photosystem II reaction center protein K 305 40.40 0 296140..297144 - 334 33239757 mviM Pro0305 - putative oxidoreductase 306 36.44 0 297180..298466 - 428 33239758 tlyC Pro0306 - hypothetical protein 307 40.24 0 298667..299245 + 192 33239759 pyrE Pro0307 - orotate phosphoribosyltransferase 308 32.50 -1 299247..300089 + 280 33239760 gcvT Pro0308 - aminomethyltransferase related to glycine cleavage protein T 309 34.49 0 300107..301570 - 487 33239761 - Pro0309 - DNA repair protein 310 38.25 0 301635..303077 + 480 33239762 manB Pro0310 - phosphomannomutase 311 37.81 0 303074..303676 + 200 33239763 - Pro0311 - xanthosine triphosphate pyrophosphatase 312 36.96 0 303715..305205 - 496 33239764 - Pro0312 - retinal pigment epithelial membrane protein 313 39.49 0 305267..305899 - 210 33239765 hisB Pro0313 - imidazoleglycerol-phosphate dehydratase 314 41.63 +1 305936..306718 - 260 33239766 fabI Pro0314 - enoyl-(acyl carrier protein) reductase 315 36.55 0 306829..307449 + 206 33239767 trxA Pro0315 - thioredoxin family protein 316 37.12 0 307512..308699 + 395 33239768 wecE Pro0316 - DegT/DnrJ/EryC1/StrS aminotransferase family protein 317 40.82 0 308737..309297 - 186 33239769 - Pro0317 - NUDIX/MutT family pyrophosphohydrolase 318 35.22 0 309369..309950 - 193 33239770 folK Pro0318 - 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 319 42.89 +1 309998..312121 + 707 33239771 chlD Pro0319 - protoporphyrin IX magnesium chelatase subunit ChlD 320 33.33 0 312130..312975 - 281 33239772 ttg2C Pro0320 - putative ABC transporter 321 37.02 0 312981..313793 - 270 33239773 ttg2A Pro0321 - ABC transporter ATP-binding protein 322 39.65 0 313970..315298 + 442 33239774 - Pro0322 - hypothetical protein 323 33.52 0 315299..315844 - 181 33239775 ndhJ Pro0323 - NADH dehydrogenase subunit J 324 37.04 0 315847..316575 - 242 33239776 ndhK Pro0324 - NADH dehydrogenase subunit B 325 37.47 0 316580..316942 - 120 33239777 ndhC Pro0325 - NADH dehydrogenase subunit A 326 37.96 0 317028..317459 + 143 33239778 - Pro0326 - putative rubredoxin 327 40.10 0 317467..318486 + 339 33239779 - Pro0327 - Ycf48-like protein 328 47.79 +2 318588..318836 + 82 33239780 psbE Pro0328 - cytochrome b559 subunit alpha 329 47.62 +2 318840..318986 + 48 33239781 psbF Pro0329 - cytochrome b559 subunit beta 330 36.67 0 319009..319128 + 39 33239782 psbL Pro0330 - photosystem II reaction center L 331 46.97 +2 319143..319340 + 65 33239783 psbJ Pro0331 - photosystem II reaction center protein J 332 39.89 0 319367..320311 - 314 33239784 pnp Pro0332 - purine nucleoside phosphorylase 333 36.62 0 320315..322477 + 720 33239785 ndh Pro0333 - NADH dehydrogenase, FAD-containing subunit 334 36.93 0 322503..323753 - 416 33239786 pcnB Pro0334 - tRNA nucleotidyltransferase/poly(A) polymerase 335 37.09 0 323818..326241 - 807 33239787 uvrD Pro0335 - superfamily I DNA/RNA helicase 336 32.85 -1 326319..326525 - 68 33239788 - Pro0336 - hypothetical protein 337 37.34 0 326768..327316 + 182 33239789 cpeB Pro0337 - phycoerythrin class III beta chain CpeB 338 39.96 0 327366..327833 + 155 33239790 cpeA Pro0338 - phycoerythrin class III alpha chain CpeA 339 31.86 -1 327881..328489 + 202 33239791 cpeZ Pro0339 - bilin biosynthesis protein CpeZ 340 37.57 0 328493..329389 - 298 33239792 mpeX Pro0340 - bilin biosynthesis protein PBS lyase MpeV/SpeZ subunit 341 31.29 -1 329467..330786 + 439 33239793 cpeY Pro0341 - bilin biosynthesis protein CpeY 342 29.42 -1 330805..331392 - 195 33239794 cpeT Pro0342 - CpeT-like protein 343 34.80 0 331389..331934 - 181 33239795 cpeS Pro0343 - CpeS-like protein 344 38.10 0 331924..332112 - 62 33239796 - Pro0344 - hypothetical protein 345 34.32 0 332125..332937 - 270 33239797 ppeC Pro0345 - phycoerythrin class III gamma chain 346 35.73 0 332950..334245 - 431 33239798 pucC Pro0346 - hypothetical protein 347 32.03 -1 334411..334641 - 76 33239799 - Pro0347 - hypothetical protein 348 38.97 0 335096..336319 - 407 33239800 xylB Pro0348 - sugar kinase 349 40.79 0 336332..337564 - 410 33239801 metK Pro0349 - S-adenosylmethionine synthetase 350 33.20 0 337609..338376 - 255 33239802 gph Pro0350 - HAD superfamily phosphatase 351 38.68 0 338390..339493 - 367 33239803 rpsA Pro0351 - 30S ribosomal protein S1 352 36.29 0 339588..340061 - 157 33239804 - Pro0352 - transcriptional regulator NrdR 353 42.71 +1 340260..340355 - 31 33239805 psbT Pro0353 - photosystem II reaction center protein T 354 46.98 +2 340387..341940 - 517 33239806 psbB Pro0354 - photosystem II PsbB protein (CP47) 355 39.87 0 341973..342125 + 50 33239807 - Pro0355 - hypothetical protein 356 40.46 0 342154..342546 + 130 33239808 fdx Pro0356 - ferredoxin 357 38.56 0 342693..342845 + 50 33239809 psbM Pro0357 - photosystem II protein M PsbM 358 38.44 0 342930..343379 + 149 33239810 fcbC Pro0358 - thioesterase 359 38.55 0 343380..344261 + 293 33239811 hemK Pro0359 - methylase of polypeptide chain release factor 360 38.95 0 344287..344874 + 195 33239812 SUA5 Pro0360 - putative translation factor (SUA5) 361 29.17 -1 344882..345049 + 55 33239813 - Pro0361 - hypothetical protein 362 38.01 0 345276..345596 - 106 33239814 minE Pro0362 - septum formation topological specificity factor 363 41.91 +1 345602..346417 - 271 33239815 minD Pro0363 - putative septum site-determining protein MinD 364 34.98 0 346556..347221 - 221 33239816 minC Pro0364 - septum formation inhibitor 365 31.83 -1 347242..348504 - 420 33239817 - Pro0365 - HD superfamily phosphohydrolase 366 37.46 0 348504..349883 - 459 33239818 prc Pro0366 - carboxyl-terminal protease 367 42.16 +1 349948..350604 + 218 33239819 petB Pro0367 - cytochrome b6 368 38.72 0 350685..351167 + 160 33239820 petD Pro0368 - cytochrome b6-f complex subunit IV 369 38.93 0 351176..352621 - 481 33239821 - Pro0369 - putative neutral invertase-like protein 370 35.80 0 358620..359471 - 283 33239822 nei Pro0370 - formamidopyrimidine-DNA glycosylase 371 38.57 0 359478..359687 - 69 33239823 psaE Pro0371 - photosystem I reaction center subunit IV 372 41.67 +1 359810..360853 + 347 33239824 - Pro0372 - hypothetical protein 373 31.51 -1 360884..361759 - 291 33239825 - Pro0373 - LysM repeat-containing protein 374 35.37 0 361850..363223 - 457 33239826 - Pro0374 - NAD-dependent aldehyde dehydrogenase 375 33.85 0 363268..363654 - 128 33239827 - Pro0375 - hypothetical protein 376 37.04 0 363741..364982 - 413 33239828 - Pro0376 - flavoprotein 377 27.27 -2 364990..365121 + 43 33239829 - Pro0377 - hypothetical protein 378 30.83 -1 365281..366000 + 239 33239830 - Pro0378 - hypothetical protein 379 43.17 +1 366104..366286 - 60 33239831 rub/hoxR Pro0379 - rubredoxin 380 32.18 -1 366770..367723 + 317 33239832 wcaA Pro0380 - glycosyltransferase 381 32.91 -1 367765..369186 + 473 33239833 - Pro0381 - hypothetical protein 382 27.78 -2 369194..369571 - 125 33239834 - Pro0382 - hypothetical protein 383 28.41 -2 369606..369950 - 114 33239835 - Pro0383 - hypothetical protein 384 39.78 0 370779..371228 + 149 33239836 aroQ Pro0384 - 3-dehydroquinate dehydratase 385 37.24 0 371225..371839 + 204 33239837 miaE Pro0385 - hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 386 32.57 -1 371843..372628 + 261 33239838 cobF Pro0386 - precorrin-2 methylase 387 39.41 0 372703..373179 + 158 33239839 - Pro0387 - hypothetical protein 388 40.99 0 373321..374691 + 456 33239840 engA Pro0388 - GTP-binding protein EngA 389 35.62 0 374696..375613 + 305 33239841 cbiQ Pro0389 - cobalt ABC transporter permease 390 40.29 0 375745..376017 + 90 33239842 - Pro0390 - hypothetical protein 391 37.50 0 376037..376660 + 207 33239843 - Pro0391 - TIM-barrel fold family protein 392 43.16 +1 376833..377402 + 189 33239844 - Pro0392 - hypothetical protein 393 41.18 +1 377412..378239 + 275 33239845 proC Pro0393 - pyrroline-5-carboxylate reductase 37.01 MEAN 3.99 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0