version 1.0
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome - 1..1751080 1883 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1760 36.80 0 1617217..1617966 + 249 33241211 rnc Pro1762 - dsRNA-specific ribonuclease/ribonuclease III 1761 34.41 0 1617963..1618148 - 61 33241212 - Pro1763 - hypothetical protein 1762 34.27 0 1618196..1618726 + 176 33241213 rimM Pro1764 - 16S rRNA-processing protein 1763 36.33 0 1618775..1620211 + 478 33241214 manC Pro1765 - mannose-1-phosphate guanylyltransferase 1764 37.64 0 1620235..1622139 - 634 33241215 glmS Pro1766 - D-fructose-6-phosphate amidotransferase 1765 46.75 +2 1622219..1622464 - 81 33241216 psaC Pro1767 - photosystem I subunit VII 1766 44.44 +1 1622599..1622841 + 80 33241217 acpP Pro1768 - acyl carrier protein 1767 43.03 +1 1622849..1624096 + 415 33241218 fabB Pro1769 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1768 40.60 0 1624148..1626157 + 669 33241219 tktA Pro1770 - transketolase 1769 39.09 0 1626184..1627590 - 468 33241220 thiC Pro1771 - thiamine biosynthesis protein ThiC 1770 34.70 0 1627791..1628009 - 72 33241221 - Pro1772 - hypothetical protein 1771 39.93 0 1628013..1629209 - 398 33241222 - Pro1773 - N-acyl-L-amino acid amidohydrolase 1772 40.08 0 1629206..1629991 - 261 33241223 - Pro1774 - TPR repeat-containing protein 1773 39.50 0 1629988..1631058 - 356 33241224 ruvB Pro1775 - Holliday junction DNA helicase B 1774 34.34 0 1631109..1631606 + 165 33241225 smpB Pro1776 - SsrA-binding protein 1775 33.33 0 1631651..1631881 + 76 33241226 - Pro1777 - hypothetical protein 1776 49.24 +2 1632035..1632298 - 87 33241227 - Pro1778 - hypothetical protein 1777 39.23 0 1632353..1633861 - 502 33241228 lysS Pro1779 - lysyl-tRNA synthetase 1778 43.46 +1 1633934..1634743 - 269 33241229 - Pro1780 - two-component response regulator 1779 36.31 0 1634977..1635480 - 167 33241230 - Pro1781 - hypothetical protein 1780 36.41 0 1635477..1636223 - 248 33241231 mreC Pro1782 - cell shape-determining protein 1781 42.45 +1 1636228..1637280 - 350 33241232 mreB Pro1783 - Actin-like ATPase 1782 34.87 0 1637412..1637801 + 129 33241233 ssb Pro1784 - single-strand DNA-binding protein 1783 35.46 0 1637798..1638454 - 218 33241234 dedA Pro1785 - hypothetical protein 1784 37.04 0 1638488..1639918 - 476 33241235 SAM1 Pro1786 - S-adenosyl-L-homocysteine hydrolase 1785 36.09 0 1639954..1640460 + 168 33241236 - Pro1787 - P-loop hydrolase 1786 40.22 0 1640409..1641425 - 338 33241237 rbsK Pro1788 - ribokinase family sugar kinase 1787 35.41 0 1641463..1642665 - 400 33241238 mutY Pro1789 - A/G-specific DNA glycosylase 1788 33.00 -1 1642645..1643556 + 303 33241239 mhpC Pro1790 - putative alpha/beta hydrolase superfamily 1789 37.99 0 1643541..1644527 - 328 33241240 rpoD Pro1791 - DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) 1790 41.10 +1 1644650..1646065 - 471 33241241 mgtE Pro1792 - Mg2+/Co2+ transporter 1791 33.60 0 1646098..1646472 - 124 33241242 crcB Pro1793 - hypothetical protein 1792 29.01 -2 1646465..1646857 - 130 33241243 crcB Pro1794 - hypothetical protein 1793 36.06 0 1646850..1647179 - 109 33241244 - Pro1795 - hypothetical protein 1794 36.87 0 1647189..1649165 - 658 33241245 gyrB Pro1796 - DNA gyrase subunit B 1795 34.67 0 1649336..1650235 + 299 33241246 miaA Pro1797 - tRNA delta-2-isopentenylpyrophosphate transferase 1796 38.94 0 1650298..1650903 + 201 33241247 infC Pro1798 - translation initiation factor IF-3 1797 39.41 0 1651060..1652046 + 328 33241248 - Pro1799 - transcriptional regulator 1798 38.55 0 1652066..1652812 + 248 33241249 cysE Pro1800 - Serine acetyltransferase 1799 37.49 0 1652820..1655660 - 946 33241250 secA Pro1801 - preprotein translocase subunit SecA 1800 37.23 0 1655799..1656260 + 153 33241251 wecD Pro1802 - putative acetyltransferase, GNAT family 1801 36.69 0 1656447..1656923 - 158 33241252 ribH Pro1803 - riboflavin synthase subunit beta 1802 37.37 0 1656981..1657178 - 65 33241253 - Pro1804 - putative photosystem II reaction center protein Z 1803 35.12 0 1657339..1660083 + 914 33241254 mutS Pro1805 - DNA mismatch repair protein 1804 38.91 0 1660088..1660750 - 220 33241255 cobH Pro1806 - precorrin isomerase 1805 34.32 0 1660814..1661830 + 338 33241256 holA Pro1807 - DNA polymerase III subunit delta 1806 39.42 0 1661867..1663624 + 585 33241257 lysC Pro1808 - aspartate kinase 1807 34.32 0 1663657..1665690 - 677 33241258 uvrB Pro1809 - excinuclease ABC subunit B 1808 39.46 0 1665781..1666563 - 260 33241259 - Pro1810 - hypothetical protein 1809 36.50 0 1666648..1667658 + 336 33241260 mesJ Pro1811 - ATPase 1810 40.33 0 1667692..1669635 - 647 33241261 - Pro1812 - metallo-beta-lactamase superfamily hydrolase 1811 41.25 +1 1669718..1670626 - 302 33241262 dapA Pro1813 - dihydrodipicolinate synthase 1812 35.85 0 1670623..1671654 - 343 33241263 asd Pro1814 - aspartate-semialdehyde dehydrogenase 1813 34.76 0 1671820..1673223 + 467 33241264 tig Pro1815 - trigger factor 1814 41.32 +1 1673273..1673923 + 216 33241265 clpP Pro1816 - protease subunit of ATP-dependent Clp protease 1815 36.95 0 1674037..1675389 + 450 33241266 clpX Pro1817 - ATP-dependent protease ATP-binding subunit 1816 33.51 0 1675533..1677212 + 559 33241267 dnaX Pro1818 - DNA polymerase III gamma/tau subunit 1817 36.45 0 1677223..1678536 - 437 33241268 - Pro1819 - glycosyl transferase, family 2 1818 37.30 0 1678583..1680121 - 512 33241269 spoIID Pro1820 - putative amidase enhancer 1819 45.96 +2 1680231..1680428 + 65 33241270 rpmI Pro1821 - 50S ribosomal protein L35 1820 38.22 0 1680493..1680840 + 115 33241271 rplT Pro1822 - 50S ribosomal protein L20 1821 30.29 -1 1680948..1681505 + 185 33241272 - Pro1823 - TPR repeat-containing protein 1822 38.60 0 1681521..1682336 + 271 33241273 thiG Pro1824 - thiazole synthase 1823 33.94 0 1682409..1682573 + 54 33241274 hli14 Pro1825 - HLIP family protein 1824 40.52 0 1682637..1683833 + 398 33241275 wcaG Pro1826 - sulfolipid (UDP-sulfoquinovose) biosynthesis protein 1825 39.91 0 1683843..1684997 + 384 33241276 rfaG Pro1827 - SqdX 1826 41.25 +1 1685012..1685314 - 100 33241277 - Pro1828 - hypothetical protein 1827 37.13 0 1685403..1688297 - 964 33241278 gcvP Pro1829 - glycine dehydrogenase 1828 37.69 0 1688331..1688720 - 129 33241279 gcvH Pro1830 - glycine cleavage system H protein 1829 35.65 0 1688756..1690048 - 430 33241280 - Pro1831 - cystathionine beta-lyase family aluminum resistance protein 1830 37.20 0 1690045..1690794 - 249 33241281 - Pro1832 - hypothetical protein 1831 42.34 +1 1690865..1691797 + 310 33241282 OLE1 Pro1833 - Fatty acid desaturase, type 1 1832 39.00 0 1691866..1692324 + 152 33241283 rplI Pro1834 - 50S ribosomal protein L9 1833 38.84 0 1692385..1693800 + 471 33241284 dnaB Pro1835 - DnaB replicative helicase 1834 37.38 0 1693840..1695843 + 667 33241285 gidA Pro1836 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1835 40.04 0 1695924..1696430 + 168 33241286 ubiC Pro1837 - chorismate lyase 1836 41.47 +1 1696436..1696951 - 171 33241287 - Pro1838 - hypothetical protein 1837 39.89 0 1697056..1697604 - 182 33241288 - Pro1839 - metal-dependent protease 1838 39.01 0 1697731..1698153 + 140 33241289 - Pro1840 - hypothetical protein 1839 36.10 0 1698178..1700235 + 685 33241290 ligA Pro1841 - NAD-dependent DNA ligase LigA 1840 26.42 -2 1700240..1700398 + 52 33241291 - Pro1842 - hypothetical protein 1841 30.27 -1 1700395..1701015 - 206 33241292 - Pro1843 - hypothetical protein 1842 39.44 0 1701033..1703834 - 933 33241293 valS Pro1844 - valyl-tRNA synthetase 1843 33.33 0 1703899..1704357 - 152 33241294 - Pro1845 - hypothetical protein 1844 38.10 0 1704422..1704673 + 83 33241295 - Pro1846 - hypothetical protein 1845 31.53 -1 1705247..1706077 + 276 33241296 - Pro1847 - pyrophosphatase 1846 33.80 0 1706106..1706969 + 287 33241297 speE Pro1848 - spermidine synthase 1847 33.33 0 1706966..1707877 + 303 33241298 speB Pro1849 - arginase 1848 32.90 -1 1707913..1708143 - 76 33241299 - Pro1850 - metal-binding cluster containing protein 1849 37.97 0 1708285..1709406 + 373 33241300 gcvT Pro1851 - glycine cleavage system aminomethyltransferase T 1850 39.49 0 1709479..1711296 + 605 33241301 aspS Pro1852 - aspartyl-tRNA synthetase 1851 38.71 0 1711409..1713064 + 551 33241302 pyrG Pro1853 - CTP synthetase 1852 37.32 0 1713061..1713738 + 225 33241303 nrdG Pro1854 - putative organic radical activating protein 1853 37.43 0 1713805..1714488 + 227 33241304 - Pro1855 - PP-loop superfamily ATPase 1854 36.03 0 1714491..1715825 + 444 33241305 trpE Pro1856 - putative p-aminobenzoate synthetase 1855 35.48 0 1715822..1716661 + 279 33241306 - Pro1857 - 4-amino-4-deoxychorismate lyase related type IV aminotransferase 1856 38.80 0 1716658..1717443 - 261 33241307 cysG Pro1858 - uroporphyrin-III c-methyltransferase 1857 37.59 0 1717442..1718497 + 351 33241308 trpD Pro1859 - hypothetical protein 1858 35.77 0 1718532..1719023 - 163 33241309 wecD Pro1860 - acetyltransferase 1859 37.86 0 1719055..1720314 + 419 33241310 proP Pro1861 - major facilitator superfamily permease 37.01 MEAN 3.99 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0