version 1.0
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome - 1..1751080 1883 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1701 41.57 +1 1559967..1560233 - 88 33241152 rpsQ Pro1703 - ribosomal protein S17 1702 43.48 +1 1560254..1560460 - 68 33241153 rpmC Pro1704 - ribosomal protein L29 1703 45.17 +2 1560464..1561012 - 182 33241154 rplP Pro1705 - 50S ribosomal protein L16 1704 42.62 +1 1561025..1561756 - 243 33241155 rpsC Pro1706 - 30S ribosomal protein S3 1705 42.67 +1 1561756..1562130 - 124 33241156 rplV Pro1707 - 50S ribosomal protein L22 1706 40.22 0 1562133..1562408 - 91 33241157 rpsS Pro1708 - 30S ribosomal protein S19 1707 46.30 +2 1562444..1563307 - 287 33241158 rplB Pro1709 - 50S ribosomal protein L2 1708 40.78 0 1563310..1563618 - 102 33241159 rplW Pro1710 - 50S ribosomal protein L23 1709 41.04 +1 1563611..1564246 - 211 33241160 rplD Pro1711 - 50S ribosomal protein L4 1710 41.67 +1 1564246..1564905 - 219 33241161 rplC Pro1712 - 50S ribosomal protein L3 1711 40.96 0 1565298..1565756 + 152 33241162 - Pro1713 - NADH dehydrogenase I subunit N 1712 37.45 0 1565810..1566805 + 331 33241163 hycB Pro1714 - Fe-S cluster containing protein 1713 39.77 0 1567044..1567820 + 258 33241164 - Pro1715 - HAD family phosphatase 1714 42.11 +1 1567932..1569071 + 379 33241165 recA Pro1716 - recombinase A 1715 41.67 +1 1569088..1569339 - 83 33241166 - Pro1717 - hypothetical protein 1716 39.69 0 1569396..1570826 - 476 33241167 dinG Pro1718 - Rad3-related DNA helicase 1717 37.49 0 1570909..1571775 + 288 33241168 tyrA Pro1719 - arogenate dehydrogenase 1718 38.80 0 1571764..1573263 - 499 33241169 - Pro1720 - phytoene dehydrogenase/carotenoid isomerase 1719 36.70 0 1573302..1574192 + 296 33241170 - Pro1721 - fructosamine/homoserine kinase family protein 1720 40.44 0 1574201..1574566 - 121 33241171 - Pro1722 - hypothetical protein 1721 34.28 0 1574688..1575215 + 175 33241172 - Pro1723 - metal-dependent protease 1722 32.63 -1 1575228..1576367 + 379 33241173 thiF Pro1724 - dinucleotide-utilizing protein 1723 42.76 +1 1576382..1577590 - 402 33241174 ctuR Pro1725 - hypothetical protein 1724 36.48 0 1577671..1578528 + 285 33241175 - Pro1726 - PP family ATPase 1725 39.74 0 1578571..1579038 - 155 33241176 speD Pro1727 - S-adenosylmethionine decarboxylase proenzyme 1726 40.45 0 1579064..1580131 - 355 33241177 recF Pro1728 - recombinational DNA repair ATPase (RecF pathway) 1727 35.32 0 1580351..1580803 - 150 33241178 - Pro1729 - hypothetical protein 1728 39.39 0 1580807..1583812 - 1001 33241179 ppc Pro1730 - phosphoenolpyruvate carboxylase 1729 35.17 0 1583809..1584954 - 381 33241180 - Pro1731 - hypothetical protein 1730 38.87 0 1584958..1586475 - 505 33241181 trpE Pro1732 - anthranilate/para-aminobenzoate synthase component I 1731 39.20 0 1586540..1586965 - 141 33241182 psaD Pro1733 - photosystem I protein PsaD 1732 38.72 0 1587077..1588450 - 457 33241183 - Pro1734 - Signal transduction histidine kinase 1733 32.71 -1 1588450..1589730 - 426 33241184 ftsW Pro1735 - cell division membrane protein 1734 39.81 0 1589731..1590810 - 359 33241185 mrp Pro1736 - ATPase 1735 39.83 0 1590897..1591928 + 343 33241186 hemF Pro1737 - coproporphyrinogen III oxidase 1736 39.05 0 1591876..1592697 - 273 33241187 - Pro1738 - dehydrogenase 1737 38.74 0 1592704..1593258 - 184 33241188 - Pro1739 - hypothetical protein 1738 36.28 0 1593460..1594104 + 214 33241189 rnd Pro1740 - putative ribonuclease D 1739 31.48 -1 1594101..1594370 - 89 33241190 - Pro1741 - hypothetical protein 1740 39.59 0 1594423..1595700 - 425 33241191 - Pro1742 - Lipid A disaccharide synthetase related enzyme 1741 35.76 0 1596595..1596759 - 54 33241192 - Pro1743 - Zn ribbon-like protein 1742 42.19 +1 1596781..1597401 - 206 33241193 - Pro1744 - hypothetical protein 1743 39.98 0 1597573..1598610 - 345 33241194 purM Pro1745 - phosphoribosylaminoimidazole synthetase 1744 36.79 0 1598748..1600307 + 519 33241195 cmk Pro1746 - bifunctional pantoate ligase/cytidylate kinase 1745 32.91 -1 1600300..1600770 - 156 33241196 wzb Pro1747 - protein-tyrosine-phosphatase 1746 33.20 0 1600861..1601634 - 257 33241197 pebB Pro1748 - phycoerythrobilin:ferredoxin oxidoreductase 1747 33.75 0 1601635..1602348 - 237 161407959 pebA Pro1749 - dihydrobiliverdin:ferredoxin oxidoreductase 1748 34.17 0 1602445..1603158 - 237 33241199 ho1 Pro1750 - Heme oxygenase 1749 42.25 +1 1603248..1603673 - 141 33241200 - Pro1751 - hypothetical protein 1750 36.63 0 1603833..1605257 + 474 33241201 icd Pro1752 - isocitrate dehydrogenase 1751 32.38 -1 1605278..1606636 - 452 33241202 - Pro1753 - hypothetical protein 1752 42.20 +1 1606671..1607843 - 390 33241203 lldD Pro1754 - L-lactate dehydrogenase (FMN-dependent) related enzyme 1753 31.98 -1 1607961..1609661 - 566 33241204 dld Pro1755 - D-lactate dehydrogenase 1754 34.73 0 1609784..1610641 - 285 33241205 galM Pro1756 - galactose mutarotase-like protein 1755 39.29 0 1610658..1611563 - 301 33241206 mhpC Pro1757 - alpha/beta fold family hydrolase 1756 40.03 0 1611686..1613059 - 457 33241207 kefB Pro1758 - Na+/H+ antiporter 1757 37.38 0 1613224..1615746 + 840 33241208 glgP Pro1759 - phosphorylase 1758 37.47 0 1615754..1616212 - 152 33241209 - Pro1760 - hypothetical protein 1759 42.42 +1 1616283..1616579 - 98 33241210 - Pro1761 - hypothetical protein 1760 36.80 0 1617217..1617966 + 249 33241211 rnc Pro1762 - dsRNA-specific ribonuclease/ribonuclease III 1761 34.41 0 1617963..1618148 - 61 33241212 - Pro1763 - hypothetical protein 1762 34.27 0 1618196..1618726 + 176 33241213 rimM Pro1764 - 16S rRNA-processing protein 1763 36.33 0 1618775..1620211 + 478 33241214 manC Pro1765 - mannose-1-phosphate guanylyltransferase 1764 37.64 0 1620235..1622139 - 634 33241215 glmS Pro1766 - D-fructose-6-phosphate amidotransferase 1765 46.75 +2 1622219..1622464 - 81 33241216 psaC Pro1767 - photosystem I subunit VII 1766 44.44 +1 1622599..1622841 + 80 33241217 acpP Pro1768 - acyl carrier protein 1767 43.03 +1 1622849..1624096 + 415 33241218 fabB Pro1769 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1768 40.60 0 1624148..1626157 + 669 33241219 tktA Pro1770 - transketolase 1769 39.09 0 1626184..1627590 - 468 33241220 thiC Pro1771 - thiamine biosynthesis protein ThiC 1770 34.70 0 1627791..1628009 - 72 33241221 - Pro1772 - hypothetical protein 1771 39.93 0 1628013..1629209 - 398 33241222 - Pro1773 - N-acyl-L-amino acid amidohydrolase 1772 40.08 0 1629206..1629991 - 261 33241223 - Pro1774 - TPR repeat-containing protein 1773 39.50 0 1629988..1631058 - 356 33241224 ruvB Pro1775 - Holliday junction DNA helicase B 1774 34.34 0 1631109..1631606 + 165 33241225 smpB Pro1776 - SsrA-binding protein 1775 33.33 0 1631651..1631881 + 76 33241226 - Pro1777 - hypothetical protein 1776 49.24 +2 1632035..1632298 - 87 33241227 - Pro1778 - hypothetical protein 1777 39.23 0 1632353..1633861 - 502 33241228 lysS Pro1779 - lysyl-tRNA synthetase 1778 43.46 +1 1633934..1634743 - 269 33241229 - Pro1780 - two-component response regulator 1779 36.31 0 1634977..1635480 - 167 33241230 - Pro1781 - hypothetical protein 1780 36.41 0 1635477..1636223 - 248 33241231 mreC Pro1782 - cell shape-determining protein 1781 42.45 +1 1636228..1637280 - 350 33241232 mreB Pro1783 - Actin-like ATPase 1782 34.87 0 1637412..1637801 + 129 33241233 ssb Pro1784 - single-strand DNA-binding protein 1783 35.46 0 1637798..1638454 - 218 33241234 dedA Pro1785 - hypothetical protein 1784 37.04 0 1638488..1639918 - 476 33241235 SAM1 Pro1786 - S-adenosyl-L-homocysteine hydrolase 1785 36.09 0 1639954..1640460 + 168 33241236 - Pro1787 - P-loop hydrolase 1786 40.22 0 1640409..1641425 - 338 33241237 rbsK Pro1788 - ribokinase family sugar kinase 1787 35.41 0 1641463..1642665 - 400 33241238 mutY Pro1789 - A/G-specific DNA glycosylase 1788 33.00 -1 1642645..1643556 + 303 33241239 mhpC Pro1790 - putative alpha/beta hydrolase superfamily 1789 37.99 0 1643541..1644527 - 328 33241240 rpoD Pro1791 - DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) 1790 41.10 +1 1644650..1646065 - 471 33241241 mgtE Pro1792 - Mg2+/Co2+ transporter 1791 33.60 0 1646098..1646472 - 124 33241242 crcB Pro1793 - hypothetical protein 1792 29.01 -2 1646465..1646857 - 130 33241243 crcB Pro1794 - hypothetical protein 1793 36.06 0 1646850..1647179 - 109 33241244 - Pro1795 - hypothetical protein 1794 36.87 0 1647189..1649165 - 658 33241245 gyrB Pro1796 - DNA gyrase subunit B 1795 34.67 0 1649336..1650235 + 299 33241246 miaA Pro1797 - tRNA delta-2-isopentenylpyrophosphate transferase 1796 38.94 0 1650298..1650903 + 201 33241247 infC Pro1798 - translation initiation factor IF-3 1797 39.41 0 1651060..1652046 + 328 33241248 - Pro1799 - transcriptional regulator 1798 38.55 0 1652066..1652812 + 248 33241249 cysE Pro1800 - Serine acetyltransferase 1799 37.49 0 1652820..1655660 - 946 33241250 secA Pro1801 - preprotein translocase subunit SecA 1800 37.23 0 1655799..1656260 + 153 33241251 wecD Pro1802 - putative acetyltransferase, GNAT family 37.01 MEAN 3.99 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0