version 1.0
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome - 1..1751080 1883 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1640 39.00 0 1500568..1500867 - 99 33241091 rpsT Pro1642 - 30S ribosomal protein S20 1641 38.62 0 1501001..1502323 + 440 33241092 hisD Pro1643 - histidinol dehydrogenase 1642 39.50 0 1502301..1503014 - 237 33241093 rpi Pro1644 - ribose 5-phosphate isomerase 1643 39.16 0 1503055..1504170 - 371 33241094 degQ Pro1645 - trypsin-like serine protease 1644 33.33 0 1504390..1504857 + 155 33241095 - Pro1646 - hypothetical protein 1645 41.30 +1 1504905..1506323 + 472 33241096 nusA Pro1647 - transcription elongation factor NusA 1646 40.86 0 1506320..1506598 + 92 33241097 - Pro1648 - nucleic-acid-binding protein implicated in transcription termination 1647 42.58 +1 1506662..1510066 + 1134 33241098 infB Pro1649 - translation initiation factor IF-2 1648 36.71 0 1510153..1510389 - 78 33241099 - Pro1650 - hypothetical protein 1649 35.00 0 1511302..1511661 - 119 33241100 - Pro1651 - hypothetical protein 1650 37.76 0 1511883..1513508 + 541 33241101 - Pro1652 - Fe-S oxidoreductase 1651 37.92 0 1513430..1514344 - 304 33241102 - Pro1653 - metal-dependent membrane protease 1652 44.55 +1 1514341..1514652 - 103 33241103 clpS Pro1654 - ATP-dependent Clp protease adaptor protein ClpS 1653 40.59 0 1514714..1515940 - 408 33241104 - Pro1655 - L,L-diaminopimelate aminotransferase 1654 38.10 0 1516036..1518720 + 894 33241105 - Pro1656 - SAM radical enzyme 1655 34.53 0 1518963..1520798 + 611 33241106 cafA Pro1657 - ribonuclease G/E 1656 38.54 0 1520802..1521377 + 191 33241107 rnhB Pro1658 - ribonuclease HII 1657 38.18 0 1521397..1521933 - 178 33241108 - Pro1659 - hypothetical protein 1658 37.37 0 1521967..1522809 + 280 33241109 pheA Pro1660 - chorismate mutase-prephenate dehydratase 1659 33.76 0 1522811..1523740 - 309 33241110 - Pro1661 - ubiE/COQ5 family methyltransferase 1660 39.82 0 1523740..1524402 - 220 33241111 - Pro1662 - ATP-dependent protease La (LON) domain 1661 40.81 0 1524466..1524786 - 106 33241112 rpsJ Pro1663 - 30S ribosomal protein S10 1662 43.33 +1 1524921..1526120 - 399 33241113 tuf Pro1664 - elongation factor Tu 1663 40.94 0 1526167..1528242 - 691 33241114 fusA Pro1665 - elongation factor G 1664 42.68 +1 1528335..1528805 - 156 33241115 rpsG Pro1666 - 30S ribosomal protein S7 1665 46.93 +2 1528848..1529222 - 124 33241116 rpsL Pro1667 - 30S ribosomal protein S12 1666 38.14 0 1529478..1534052 + 1524 33241117 glsF Pro1668 - ferredoxin-dependent glutamate synthase 1667 32.73 -1 1534067..1534399 + 110 33241118 - Pro1669 - hypothetical protein 1668 37.74 0 1534377..1535261 - 294 33241119 lipA Pro1670 - lipoyl synthase 1669 39.68 0 1535300..1537063 - 587 33241120 cobJ Pro1671 - precorrin-3B methylase 1670 44.70 +1 1537494..1539815 + 773 33241121 psaA Pro1672 - photosystem I P700 chlorophyll a apoprotein A1 1671 42.96 +1 1539838..1542081 + 747 33241122 psaB Pro1673 - photosystem I P700 chlorophyll a apoprotein A2 1672 37.38 0 1542127..1543041 - 304 33241123 - Pro1674 - hypothetical protein 1673 35.19 0 1543060..1543812 + 250 33241124 spr Pro1675 - cell wall-associated hydrolase 1674 33.44 0 1543842..1544792 + 316 33241125 wcaA Pro1676 - glycosyltransferase 1675 37.39 0 1544762..1545229 - 155 33241126 - Pro1677 - hypothetical protein 1676 52.14 +2 1545356..1545472 + 38 33241127 psaI Pro1678 - photosystem I reaction center subunit VIII 1677 43.17 +1 1545518..1546117 + 199 33241128 psaL Pro1679 - photosystem I reaction center protein subunit XI 1678 26.24 -2 1546214..1546354 + 46 33241129 - Pro1680 - hypothetical protein 1679 39.97 0 1546581..1547741 - 386 33241130 alr Pro1681 - alanine racemase 1680 38.21 0 1547801..1548313 + 170 33241131 mcrA Pro1682 - HNH endonuclease family protein 1681 40.35 0 1548317..1549414 - 365 33241132 prfA Pro1683 - peptide chain release factor 1 1682 39.65 0 1549450..1549734 - 94 33241133 rpmE Pro1684 - 50S ribosomal protein L31 1683 41.36 +1 1549778..1550188 - 136 33241134 rpsI Pro1685 - 30S ribosomal protein S9 1684 39.51 0 1550185..1550637 - 150 33241135 rplM Pro1686 - 50S ribosomal protein L13 1685 37.13 0 1550793..1551662 - 289 33241136 truA Pro1687 - tRNA pseudouridine synthase A 1686 41.31 +1 1551687..1552037 - 116 33241137 rplQ Pro1688 - 50S ribosomal protein L17 1687 42.81 +1 1552074..1553012 - 312 33241138 rpoA Pro1689 - DNA-directed RNA polymerase subunit alpha 1688 47.07 +2 1553076..1553468 - 130 33241139 rpsK Pro1690 - 30S ribosomal protein S11 1689 45.90 +2 1553538..1553903 - 121 33241140 rpsM Pro1691 - 30S ribosomal protein S13 1690 46.15 +2 1554020..1554136 - 38 33241141 rpmJ Pro1692 - 50S ribosomal protein L36 1691 35.52 0 1554183..1554731 - 182 33241142 adk Pro1693 - adenylate kinase 1692 38.11 0 1554763..1556082 - 439 33241143 secY Pro1694 - preprotein translocase subunit SecY 1693 39.25 0 1556149..1556604 - 151 33241144 rplO Pro1695 - 50S ribosomal protein L15 1694 43.55 +1 1556611..1557246 - 211 33241145 rpsE Pro1696 - 30S ribosomal protein S5 1695 40.11 0 1557263..1557631 - 122 33241146 rplR Pro1697 - 50S ribosomal protein L18 1696 41.48 +1 1557666..1558205 - 179 33241147 rplF Pro1698 - 50S ribosomal protein L6 1697 42.54 +1 1558218..1558619 - 133 33241148 rpsH Pro1699 - 30S ribosomal protein S8 1698 40.56 0 1558624..1559163 - 179 33241149 rplE Pro1700 - 50S ribosomal protein L5 1699 36.13 0 1559248..1559604 - 118 33241150 rplX Pro1701 - 50S ribosomal protein L24 1700 40.98 0 1559605..1559970 - 121 33241151 rplN Pro1702 - 50S ribosomal protein L14 1701 41.57 +1 1559967..1560233 - 88 33241152 rpsQ Pro1703 - ribosomal protein S17 1702 43.48 +1 1560254..1560460 - 68 33241153 rpmC Pro1704 - ribosomal protein L29 1703 45.17 +2 1560464..1561012 - 182 33241154 rplP Pro1705 - 50S ribosomal protein L16 1704 42.62 +1 1561025..1561756 - 243 33241155 rpsC Pro1706 - 30S ribosomal protein S3 1705 42.67 +1 1561756..1562130 - 124 33241156 rplV Pro1707 - 50S ribosomal protein L22 1706 40.22 0 1562133..1562408 - 91 33241157 rpsS Pro1708 - 30S ribosomal protein S19 1707 46.30 +2 1562444..1563307 - 287 33241158 rplB Pro1709 - 50S ribosomal protein L2 1708 40.78 0 1563310..1563618 - 102 33241159 rplW Pro1710 - 50S ribosomal protein L23 1709 41.04 +1 1563611..1564246 - 211 33241160 rplD Pro1711 - 50S ribosomal protein L4 1710 41.67 +1 1564246..1564905 - 219 33241161 rplC Pro1712 - 50S ribosomal protein L3 1711 40.96 0 1565298..1565756 + 152 33241162 - Pro1713 - NADH dehydrogenase I subunit N 1712 37.45 0 1565810..1566805 + 331 33241163 hycB Pro1714 - Fe-S cluster containing protein 1713 39.77 0 1567044..1567820 + 258 33241164 - Pro1715 - HAD family phosphatase 1714 42.11 +1 1567932..1569071 + 379 33241165 recA Pro1716 - recombinase A 1715 41.67 +1 1569088..1569339 - 83 33241166 - Pro1717 - hypothetical protein 1716 39.69 0 1569396..1570826 - 476 33241167 dinG Pro1718 - Rad3-related DNA helicase 1717 37.49 0 1570909..1571775 + 288 33241168 tyrA Pro1719 - arogenate dehydrogenase 1718 38.80 0 1571764..1573263 - 499 33241169 - Pro1720 - phytoene dehydrogenase/carotenoid isomerase 1719 36.70 0 1573302..1574192 + 296 33241170 - Pro1721 - fructosamine/homoserine kinase family protein 1720 40.44 0 1574201..1574566 - 121 33241171 - Pro1722 - hypothetical protein 1721 34.28 0 1574688..1575215 + 175 33241172 - Pro1723 - metal-dependent protease 1722 32.63 -1 1575228..1576367 + 379 33241173 thiF Pro1724 - dinucleotide-utilizing protein 1723 42.76 +1 1576382..1577590 - 402 33241174 ctuR Pro1725 - hypothetical protein 1724 36.48 0 1577671..1578528 + 285 33241175 - Pro1726 - PP family ATPase 1725 39.74 0 1578571..1579038 - 155 33241176 speD Pro1727 - S-adenosylmethionine decarboxylase proenzyme 1726 40.45 0 1579064..1580131 - 355 33241177 recF Pro1728 - recombinational DNA repair ATPase (RecF pathway) 1727 35.32 0 1580351..1580803 - 150 33241178 - Pro1729 - hypothetical protein 1728 39.39 0 1580807..1583812 - 1001 33241179 ppc Pro1730 - phosphoenolpyruvate carboxylase 1729 35.17 0 1583809..1584954 - 381 33241180 - Pro1731 - hypothetical protein 1730 38.87 0 1584958..1586475 - 505 33241181 trpE Pro1732 - anthranilate/para-aminobenzoate synthase component I 1731 39.20 0 1586540..1586965 - 141 33241182 psaD Pro1733 - photosystem I protein PsaD 1732 38.72 0 1587077..1588450 - 457 33241183 - Pro1734 - Signal transduction histidine kinase 1733 32.71 -1 1588450..1589730 - 426 33241184 ftsW Pro1735 - cell division membrane protein 1734 39.81 0 1589731..1590810 - 359 33241185 mrp Pro1736 - ATPase 1735 39.83 0 1590897..1591928 + 343 33241186 hemF Pro1737 - coproporphyrinogen III oxidase 1736 39.05 0 1591876..1592697 - 273 33241187 - Pro1738 - dehydrogenase 1737 38.74 0 1592704..1593258 - 184 33241188 - Pro1739 - hypothetical protein 1738 36.28 0 1593460..1594104 + 214 33241189 rnd Pro1740 - putative ribonuclease D 1739 31.48 -1 1594101..1594370 - 89 33241190 - Pro1741 - hypothetical protein 37.01 MEAN 3.99 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0