version 1.0
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome - 1..1751080 1883 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1598 43.25 +1 1457063..1458202 + 379 33241049 ald Pro1600 - alanine dehydrogenase 1599 40.96 0 1458214..1459314 - 366 33241050 - Pro1601 - hypothetical protein 1600 35.90 0 1459319..1459513 - 64 33241051 - Pro1602 - hypothetical protein 1601 39.85 0 1459545..1460495 - 316 33241052 atpG Pro1603 - F0F1 ATP synthase subunit gamma 1602 41.57 +1 1460526..1462043 - 505 33241053 atpA Pro1604 - F0F1 ATP synthase subunit alpha 1603 41.67 +1 1462111..1462662 - 183 33241054 atpH Pro1605 - F0F1 ATP synthase subunit delta 1604 38.76 0 1462659..1463174 - 171 33241055 atpF Pro1606 - F0F1 ATP synthase subunit B 1605 42.21 +1 1463171..1463632 - 153 33241056 atpF Pro1607 - F0F1 ATP synthase subunit B' 1606 51.41 +2 1463765..1464013 - 82 33241057 atpE Pro1608 - F0F1 ATP synthase subunit C 1607 41.74 +1 1464186..1464911 - 241 33241058 atpB Pro1609 - F0F1 ATP synthase subunit A 1608 39.38 0 1464995..1465474 - 159 33241059 - Pro1610 - hypothetical protein 1609 37.37 0 1465888..1467126 + 412 33241060 ftsW Pro1611 - cell division protein FtsW 1610 41.44 +1 1467225..1467878 + 217 33241061 ccdA Pro1612 - putative c-type cytochrome biogenesis protein CcdA 1611 32.64 -1 1467883..1469172 + 429 33241062 resB Pro1613 - putative c-type cytochrome biogenesis protein Ccs1 1612 35.05 0 1469169..1469576 - 135 33241063 - Pro1614 - GTP cyclohydrolase I family protein 1613 40.79 0 1469770..1469997 + 75 33241064 - Pro1615 - hypothetical protein 1614 38.35 0 1470040..1470378 + 112 33241065 glnK Pro1616 - nitrogen regulatory protein P-II 1615 38.99 0 1470367..1471179 - 270 33241066 - Pro1617 - rRNA methylase 1616 40.85 0 1471233..1471538 + 101 33241067 - Pro1618 - hypothetical protein 1617 39.35 0 1471589..1472884 + 431 33241068 purB Pro1619 - adenylosuccinate lyase 1618 39.34 0 1472949..1474346 + 465 33241069 fumC Pro1620 - fumarate hydratase 1619 39.63 0 1474361..1477138 - 925 33241070 - Pro1621 - superfamily II RNA helicase 1620 39.53 0 1477252..1478397 + 381 33241071 cioF Pro1622 - putative 8-amino-7-oxononanoate synthase 1621 35.29 0 1478394..1479107 + 237 33241072 - Pro1623 - Alpha/beta hydrolase family protein 1622 38.23 0 1479107..1479862 + 251 33241073 - Pro1624 - SAM dependent methyltransferase 1623 39.55 0 1479859..1480518 + 219 33241074 cioD Pro1625 - dethiobiotin synthetase 1624 41.38 +1 1480761..1482065 + 434 33241075 cioA Pro1626 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1625 43.45 +1 1482070..1482336 - 88 33241076 - Pro1627 - hypothetical protein 1626 37.20 0 1482278..1482820 - 180 33241077 cbpA Pro1628 - DnaJ-class molecular chaperone 1627 36.61 0 1482894..1483655 + 253 33241078 gidB Pro1629 - phosphoribulokinase 1628 38.40 0 1483634..1484857 - 407 33241079 - Pro1630 - aldo/keto reductase family protein 1629 42.78 +1 1484873..1485232 - 119 33241080 fer Pro1631 - ferredoxin 1630 39.44 0 1485245..1485637 - 130 33241081 - Pro1632 - hypothetical protein 1631 41.43 +1 1485637..1485846 - 69 33241082 - Pro1633 - hypothetical protein 1632 39.88 0 1485933..1486742 - 269 33241083 - Pro1634 - HEAT repeat-containing protein 1633 40.14 0 1486955..1488718 - 587 33241084 putP Pro1635 - Na+/proline symporter 1634 37.34 0 1488769..1489815 - 348 33241085 - Pro1636 - putative Fe-S-cluster redox protein 1635 37.25 0 1489827..1489979 - 50 33241086 hli2 Pro1637 - putative high light inducible protein 1636 41.06 +1 1490023..1494126 - 1367 33241087 rpoC Pro1638 - DNA-directed RNA polymerase subunit beta' 1637 38.69 0 1494174..1496078 - 634 33241088 rpoC Pro1639 - DNA-directed RNA polymerase subunit gamma 1638 39.29 0 1496129..1499419 - 1096 33241089 rpoB Pro1640 - DNA-directed RNA polymerase subunit beta 1639 39.54 0 1499696..1500484 - 262 33241090 tatD Pro1641 - putative deoxyribonuclease, TatD family 1640 39.00 0 1500568..1500867 - 99 33241091 rpsT Pro1642 - 30S ribosomal protein S20 1641 38.62 0 1501001..1502323 + 440 33241092 hisD Pro1643 - histidinol dehydrogenase 1642 39.50 0 1502301..1503014 - 237 33241093 rpi Pro1644 - ribose 5-phosphate isomerase 1643 39.16 0 1503055..1504170 - 371 33241094 degQ Pro1645 - trypsin-like serine protease 1644 33.33 0 1504390..1504857 + 155 33241095 - Pro1646 - hypothetical protein 1645 41.30 +1 1504905..1506323 + 472 33241096 nusA Pro1647 - transcription elongation factor NusA 1646 40.86 0 1506320..1506598 + 92 33241097 - Pro1648 - nucleic-acid-binding protein implicated in transcription termination 1647 42.58 +1 1506662..1510066 + 1134 33241098 infB Pro1649 - translation initiation factor IF-2 1648 36.71 0 1510153..1510389 - 78 33241099 - Pro1650 - hypothetical protein 1649 35.00 0 1511302..1511661 - 119 33241100 - Pro1651 - hypothetical protein 1650 37.76 0 1511883..1513508 + 541 33241101 - Pro1652 - Fe-S oxidoreductase 1651 37.92 0 1513430..1514344 - 304 33241102 - Pro1653 - metal-dependent membrane protease 1652 44.55 +1 1514341..1514652 - 103 33241103 clpS Pro1654 - ATP-dependent Clp protease adaptor protein ClpS 1653 40.59 0 1514714..1515940 - 408 33241104 - Pro1655 - L,L-diaminopimelate aminotransferase 1654 38.10 0 1516036..1518720 + 894 33241105 - Pro1656 - SAM radical enzyme 1655 34.53 0 1518963..1520798 + 611 33241106 cafA Pro1657 - ribonuclease G/E 1656 38.54 0 1520802..1521377 + 191 33241107 rnhB Pro1658 - ribonuclease HII 1657 38.18 0 1521397..1521933 - 178 33241108 - Pro1659 - hypothetical protein 1658 37.37 0 1521967..1522809 + 280 33241109 pheA Pro1660 - chorismate mutase-prephenate dehydratase 1659 33.76 0 1522811..1523740 - 309 33241110 - Pro1661 - ubiE/COQ5 family methyltransferase 1660 39.82 0 1523740..1524402 - 220 33241111 - Pro1662 - ATP-dependent protease La (LON) domain 1661 40.81 0 1524466..1524786 - 106 33241112 rpsJ Pro1663 - 30S ribosomal protein S10 1662 43.33 +1 1524921..1526120 - 399 33241113 tuf Pro1664 - elongation factor Tu 1663 40.94 0 1526167..1528242 - 691 33241114 fusA Pro1665 - elongation factor G 1664 42.68 +1 1528335..1528805 - 156 33241115 rpsG Pro1666 - 30S ribosomal protein S7 1665 46.93 +2 1528848..1529222 - 124 33241116 rpsL Pro1667 - 30S ribosomal protein S12 1666 38.14 0 1529478..1534052 + 1524 33241117 glsF Pro1668 - ferredoxin-dependent glutamate synthase 1667 32.73 -1 1534067..1534399 + 110 33241118 - Pro1669 - hypothetical protein 1668 37.74 0 1534377..1535261 - 294 33241119 lipA Pro1670 - lipoyl synthase 1669 39.68 0 1535300..1537063 - 587 33241120 cobJ Pro1671 - precorrin-3B methylase 1670 44.70 +1 1537494..1539815 + 773 33241121 psaA Pro1672 - photosystem I P700 chlorophyll a apoprotein A1 1671 42.96 +1 1539838..1542081 + 747 33241122 psaB Pro1673 - photosystem I P700 chlorophyll a apoprotein A2 1672 37.38 0 1542127..1543041 - 304 33241123 - Pro1674 - hypothetical protein 1673 35.19 0 1543060..1543812 + 250 33241124 spr Pro1675 - cell wall-associated hydrolase 1674 33.44 0 1543842..1544792 + 316 33241125 wcaA Pro1676 - glycosyltransferase 1675 37.39 0 1544762..1545229 - 155 33241126 - Pro1677 - hypothetical protein 1676 52.14 +2 1545356..1545472 + 38 33241127 psaI Pro1678 - photosystem I reaction center subunit VIII 1677 43.17 +1 1545518..1546117 + 199 33241128 psaL Pro1679 - photosystem I reaction center protein subunit XI 1678 26.24 -2 1546214..1546354 + 46 33241129 - Pro1680 - hypothetical protein 1679 39.97 0 1546581..1547741 - 386 33241130 alr Pro1681 - alanine racemase 1680 38.21 0 1547801..1548313 + 170 33241131 mcrA Pro1682 - HNH endonuclease family protein 1681 40.35 0 1548317..1549414 - 365 33241132 prfA Pro1683 - peptide chain release factor 1 1682 39.65 0 1549450..1549734 - 94 33241133 rpmE Pro1684 - 50S ribosomal protein L31 1683 41.36 +1 1549778..1550188 - 136 33241134 rpsI Pro1685 - 30S ribosomal protein S9 1684 39.51 0 1550185..1550637 - 150 33241135 rplM Pro1686 - 50S ribosomal protein L13 1685 37.13 0 1550793..1551662 - 289 33241136 truA Pro1687 - tRNA pseudouridine synthase A 1686 41.31 +1 1551687..1552037 - 116 33241137 rplQ Pro1688 - 50S ribosomal protein L17 1687 42.81 +1 1552074..1553012 - 312 33241138 rpoA Pro1689 - DNA-directed RNA polymerase subunit alpha 1688 47.07 +2 1553076..1553468 - 130 33241139 rpsK Pro1690 - 30S ribosomal protein S11 1689 45.90 +2 1553538..1553903 - 121 33241140 rpsM Pro1691 - 30S ribosomal protein S13 1690 46.15 +2 1554020..1554136 - 38 33241141 rpmJ Pro1692 - 50S ribosomal protein L36 1691 35.52 0 1554183..1554731 - 182 33241142 adk Pro1693 - adenylate kinase 1692 38.11 0 1554763..1556082 - 439 33241143 secY Pro1694 - preprotein translocase subunit SecY 1693 39.25 0 1556149..1556604 - 151 33241144 rplO Pro1695 - 50S ribosomal protein L15 1694 43.55 +1 1556611..1557246 - 211 33241145 rpsE Pro1696 - 30S ribosomal protein S5 1695 40.11 0 1557263..1557631 - 122 33241146 rplR Pro1697 - 50S ribosomal protein L18 1696 41.48 +1 1557666..1558205 - 179 33241147 rplF Pro1698 - 50S ribosomal protein L6 1697 42.54 +1 1558218..1558619 - 133 33241148 rpsH Pro1699 - 30S ribosomal protein S8 37.01 MEAN 3.99 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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