version 1.0
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome - 1..1751080 1883 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1245 44.68 +1 1149118..1149399 - 93 33240696 infA Pro1246 - translation initiation factor IF-1 1246 34.72 0 1149471..1149686 - 71 33240697 - Pro1247 - hypothetical protein 1247 38.63 0 1149747..1150709 - 320 33240698 - Pro1248 - putative chaperon-like protein for quinone binding in photosystem II 1248 48.48 +2 1150769..1150867 - 32 33240699 petM Pro1249 - cytochrome b6-f complex subunit PetM 1249 36.62 0 1151116..1152090 + 324 33240700 mhpC Pro1250 - alpha/beta fold family hydrolase 1250 40.04 0 1152087..1152593 + 168 33240701 ilvH Pro1251 - acetolactate synthase 3 regulatory subunit 1251 28.77 -2 1152648..1153349 - 233 33240702 ppiB Pro1252 - peptidyl-prolyl cis-trans isomerase 1252 36.43 0 1153349..1153930 - 193 33240703 - Pro1253 - photosystem I assembly protein Ycf4 1253 44.48 +1 1154108..1155184 + 358 33240704 psbD Pro1254 - photosystem II reaction center D2 1254 43.46 +1 1155168..1156550 + 460 33240705 psbC Pro1255 - photosystem II PsbC protein (CP43) 1255 33.81 0 1156646..1157272 - 208 33240706 maf Pro1257 - nucleotide-binding protein implicated in inhibition of septum formation 1256 29.90 -1 1157248..1157655 + 135 33240707 - Pro1258 - hypothetical protein 1257 37.47 0 1157652..1159175 + 507 33240708 cobQ Pro1259 - cobyric acid synthase 1258 37.40 0 1159172..1159417 + 81 33240709 fdx Pro1260 - hypothetical protein 1259 32.49 -1 1159507..1160925 - 472 33240710 - Pro1261 - Zn-dependent hydrolase of the beta-lactamase fold, partial 1260 31.04 -1 1160963..1163053 - 696 33240711 - Pro1262 - membrane associated acyltransferase 1261 34.99 0 1163358..1163720 - 120 33240712 - Pro1263 - hypothetical protein 1262 29.77 -1 1163872..1164573 + 233 33240713 - Pro1264 - hypothetical protein 1263 30.20 -1 1164742..1167198 + 818 33240714 - Pro1265 - hypothetical protein 1264 29.11 -1 1167199..1167885 + 228 33240715 - Pro1266 - hypothetical protein 1265 27.10 -2 1167975..1168856 + 293 33240716 - Pro1267 - calcineurin family phosphoesterase 1266 37.60 0 1168897..1169787 + 296 33240717 glyQ Pro1268 - glycyl-tRNA synthetase subunit alpha 1267 44.40 +1 1169899..1171452 + 517 33240718 - Pro1269 - porin-like protein 1268 42.39 +1 1171620..1171862 - 80 33240719 - Pro1270 - hypothetical protein 1269 36.19 0 1171958..1172623 - 221 33240720 piuC Pro1271 - putative hydroxylase 1270 37.71 0 1172770..1173798 + 342 33240721 afuA Pro1272 - ABC-type Fe3+ transport system periplasmic component 1271 28.16 -2 1174268..1174828 - 186 33240722 - Pro1273 - hypothetical protein 1272 32.04 -1 1174866..1176800 + 644 33240723 - Pro1274 - DNA helicase 1273 36.78 0 1177065..1177238 - 57 33240724 - Pro1275 - hypothetical protein 1274 33.70 0 1177675..1178226 + 183 33240725 - Pro1276 - hypothetical protein 1275 31.75 -1 1178442..1179323 + 293 33240726 smtA Pro1277 - SAM-dependent methyltransferase 1276 31.97 -1 1179653..1180312 + 219 33240727 - Pro1278 - HAD superfamily hydrolase 1277 30.30 -1 1180290..1181246 + 318 33240728 - Pro1279 - HAD superfamily hydrolase 1278 34.32 0 1181185..1181991 + 268 33240729 - Pro1280 - transketolase 1279 33.44 0 1182001..1182927 + 308 33240730 - Pro1281 - 1-deoxy-xylulose 5-phosphate synthase 1280 32.41 -1 1182924..1183790 + 288 33240731 wcaG Pro1282 - NAD dependent epimerase/dehydratase 1281 31.15 -1 1183902..1184678 + 258 33240732 - Pro1283 - 2OG-Fe(II) dioxygenase superfamily protein 1282 31.18 -1 1184675..1185091 + 138 33240733 - Pro1284 - hypothetical protein 1283 33.33 0 1185095..1185754 + 219 33240734 smtA Pro1285 - SAM-dependent methyltransferase 1284 35.76 0 1185806..1186918 + 370 33240735 glf Pro1286 - UDP-galactopyranose mutase 1285 28.26 -2 1186958..1188259 + 433 33240736 - Pro1287 - hypothetical protein 1286 42.25 +1 1188562..1189626 + 354 33240737 pcbF Pro1288 - chlorophyll a/b binding light harvesting protein PcbF 1287 37.56 0 1189952..1190803 - 283 33240738 - Pro1289 - hypothetical protein 1288 38.21 0 1190861..1191823 - 320 33240739 - Pro1290 - hypothetical protein 1289 40.31 0 1191765..1192997 - 410 33240740 - Pro1291 - adhesin-like protein 1290 40.56 0 1193100..1193279 - 59 33240741 - Pro1292 - hypothetical protein 1291 34.21 0 1193707..1195527 - 606 33240742 arnT Pro1293 - glycosyl transferase family protein 1292 39.21 0 1195563..1196651 - 362 33240743 rfaG Pro1294 - glycosyltransferase 1293 38.21 0 1196648..1197610 - 320 33240744 rhaT Pro1295 - DMT family permease 1294 41.73 +1 1197664..1198473 + 269 33240745 sppA Pro1296 - signal peptide peptidase SppA (protease IV) 1295 39.94 0 1198498..1198860 + 120 33240746 aroH Pro1297 - chorismate mutase 1296 35.56 0 1198942..1199526 + 194 33240747 - Pro1298 - hypothetical protein 1297 39.86 0 1199583..1199720 + 45 33240748 rpmH Pro1299 - 50S ribosomal protein L34 1298 34.90 0 1199779..1200162 + 127 33240749 rnpA Pro1300 - ribonuclease P protein component 1299 39.05 0 1200162..1200563 + 133 33240750 - Pro1301 - hypothetical protein 1300 38.82 0 1200654..1201802 + 382 33240751 yidC Pro1302 - putative inner membrane protein translocase component YidC 1301 40.57 0 1201885..1203363 + 492 33240752 spoVK Pro1303 - AAA family ATPase 1302 37.40 0 1203372..1204649 + 425 33240753 serS Pro1304 - seryl-tRNA synthetase 1303 36.20 0 1204654..1205736 + 360 33240754 - Pro1305 - membrane-associated Zn-dependent protease 1304 41.67 +1 1205795..1206094 + 99 33240755 rpsN Pro1306 - 30S ribosomal protein S14 1305 40.30 0 1206287..1208455 + 722 33240756 pnp Pro1307 - polynucleotide phosphorylase/polyadenylase 1306 39.34 0 1208471..1209385 - 304 33240757 cysQ Pro1308 - 3'-phosphoadenosine 5'-phosphosulfate 3'-phosphatase 1307 37.36 0 1209387..1210304 + 305 33240758 - Pro1309 - tetrapyrrole methylase family protein 1308 32.07 -1 1210325..1210561 + 78 33240759 - Pro1310 - hypothetical protein 1309 35.40 0 1210574..1211299 - 241 33240760 - Pro1311 - hypothetical protein 1310 34.32 0 1212167..1213582 - 471 33240761 ugd Pro1312 - UDP-glucose 6-dehydrogenase 1311 35.82 0 1213586..1214509 - 307 33240762 wcaG Pro1313 - NAD dependent epimerase/dehydratase 1312 35.63 0 1214631..1215674 - 347 33240763 galE Pro1314 - UDP-glucose 4-epimerase 1313 35.19 0 1215866..1216891 - 341 33240764 wcaG Pro1315 - NAD dependent epimerase/dehydratase 1314 33.09 0 1217122..1218336 + 404 33240765 wza Pro1316 - polysaccharide export-related periplasmic protein 1315 35.07 0 1218351..1219040 - 229 33240766 - Pro1317 - protein distantly related to SAM-dependent methyltransferase 1316 32.27 -1 1219466..1220125 + 219 33240767 hisB Pro1318 - HAD family phosphatase 1317 34.15 0 1220127..1221353 + 408 33240768 - Pro1319 - FAD dependent oxidoreductase 1318 35.25 0 1221358..1222086 + 242 33240769 GCD1 Pro1320 - nucleotidyl transferase family enzyme 1319 34.35 0 1222089..1222679 + 196 33240770 gmhA Pro1321 - phosphoheptose isomerase 1320 34.85 0 1222693..1224207 + 504 33240771 rfaE Pro1322 - ADP-heptose synthase 1321 33.23 0 1224296..1225243 + 315 33240772 wcaG Pro1323 - NAD dependent epimerase/dehydratase 1322 27.75 -2 1225302..1226018 + 238 33240773 - Pro1324 - SAM-dependent methyltransferase 1323 31.19 -1 1226040..1226924 + 294 33240774 wcaA Pro1325 - glycosyltransferase 1324 29.69 -1 1226928..1227887 + 319 33240775 wcaA Pro1326 - glycosyltransferase 1325 33.15 0 1227921..1229027 + 368 33240776 rfaG Pro1327 - glycosyltransferase 1326 30.28 -1 1229035..1230018 + 327 33240777 wcaA Pro1328 - glycosyltransferase 1327 29.22 -1 1230051..1231217 + 388 33240778 rfaG Pro1329 - glycosyltransferase 1328 34.24 0 1231308..1233065 + 585 33240779 gumC Pro1330 - hypothetical protein 1329 31.23 -1 1233124..1234359 + 411 33240780 - Pro1331 - hypothetical protein 1330 32.55 -1 1234364..1236145 - 593 33240781 mdlB Pro1332 - ABC-type multidrug transport system ATPase and permease components 1331 29.51 -1 1236299..1237162 - 287 33240782 smtA Pro1333 - SAM-dependent methyltransferase 1332 30.52 -1 1237463..1238422 + 319 33240783 - Pro1334 - beta-1,4-N-acetylglucosaminyltransferase 1333 31.65 -1 1238448..1240286 - 612 33240784 - Pro1335 - hypothetical protein 1334 42.36 +1 1240339..1240947 - 202 33240785 lexA Pro1336 - SOS function regulatory protein, LexA repressor 1335 38.77 0 1241014..1241970 - 318 33240786 argF Pro1337 - ornithine carbamoyltransferase 1336 39.07 0 1242030..1243895 - 621 33240787 ftsH Pro1338 - cell division protein FtsH3 1337 40.58 0 1243991..1245094 - 367 33240788 ribD Pro1339 - pyrimidine reductase 1338 33.90 0 1245084..1245614 - 176 33240789 - Pro1340 - hypothetical protein 1339 40.07 0 1245607..1245873 - 88 33240790 - Pro1341 - hypothetical protein 1340 36.02 0 1245934..1247238 + 434 33240791 cobL Pro1342 - precorrin-6B methylase 2 1341 43.89 +1 1247256..1248164 - 302 33240792 ppnK Pro1343 - inorganic polyphosphate/ATP-NAD kinase 1342 38.49 0 1248203..1249210 - 335 33240793 pheS Pro1344 - phenylalanyl-tRNA synthetase alpha chain 1343 40.18 0 1249282..1250070 + 262 33240794 surE Pro1345 - survival protein SurE 1344 42.91 +1 1250076..1250639 - 187 33240795 - Pro1346 - hypothetical protein 37.01 MEAN 3.99 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0