IslandPath Analysis: Propionibacterium acnes KPA171202



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 60.05   STD DEV: 3.20
Propionibacterium acnes KPA171202, complete genome - 1..2560265
2297 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
697	 59.32	0	777144..777701	-	185	50842193	-	PPA0705	-	putative ABC transporter ATP-binding protein
698	 54.79	-1	778612..778830	+	72	50842194	-	PPA0706	-	hypothetical protein
699	 63.58	+1	779173..779787	-	204	50842195	-	PPA0707	-	putative nucleoside-diphosphate-sugar epimerase
700	 61.05	0	779894..781354	-	486	50842196	-	PPA0708	-	inositol-5-monophosphate dehydrogenase
701	 63.21	0	781414..781731	+	105	50842197	-	PPA0709	-	putative methyltransferase
702	 59.94	0	781780..783459	-	559	50842198	-	PPA0710	-	cytochrome b subunit
703	 58.88	0	783459..784511	-	350	50842199	-	PPA0711	-	ubiquinol-cytochrome c reductase iron-sulfur subunit
704	 60.20	0	784508..785311	-	267	50842200	-	PPA0712	-	cytochrome c heme-binding subunit
705	 57.22	0	785343..785924	-	193	50842201	-	PPA0713	-	cytochrome c oxidase subunit III
706	 61.11	0	786247..786714	+	155	50842202	-	PPA0714	-	putative response regulator
707	 62.31	0	786998..787708	-	236	50842203	-	PPA0715	-	hypothetical protein
708	 60.99	0	787718..788263	-	181	50842204	-	PPA0716	-	hypothetical protein
709	 62.19	0	788491..789606	-	371	50842205	-	PPA0717	-	putative regulatory protein
710	 61.40	0	789789..790301	+	170	50842206	-	PPA0718	-	peptidyl-prolyl cis-trans isomerase A
711	 59.22	0	790419..791063	+	214	50842207	-	PPA0719	-	hypothetical protein
712	 59.83	0	790983..792884	-	633	50842208	-	PPA0720	-	hypothetical protein
713	 60.28	0	793035..794192	+	385	50842209	-	PPA0721	-	NPL/P60 family secreted protein
714	 59.85	0	794199..795269	+	356	50842210	-	PPA0722	-	glucokinase
715	 62.01	0	795274..795681	-	135	50842211	-	PPA0723	-	hypothetical protein
716	 58.73	0	795741..796496	+	251	50842212	-	PPA0724	-	putative acyltransferase
717	 60.57	0	796663..797220	+	185	50842213	-	PPA0725	-	putative acyltransferase
718	 58.84	0	797294..798712	+	472	50842214	-	PPA0726	-	phospho-2-dehydro-3-deoxyheptonate aldolase
719	 60.03	0	798816..799463	+	215	50842215	-	PPA0727	-	putative Zn-dependent hydrolase
720	 62.38	0	799479..800435	-	318	50842216	-	PPA0728	-	membrane spanning protein DUF6
721	 59.52	0	800485..801897	-	470	50842217	-	PPA0729	-	serine-threonine protein kinase
722	 58.33	0	802024..802467	+	147	50842218	-	PPA0730	-	guanyl-specific ribonuclease Sa3 precursor
723	 58.40	0	802464..802862	+	132	50842219	-	PPA0731	-	hypothetical protein
724	 63.11	0	802887..803984	-	365	50842220	-	PPA0732	-	geranylgeranyl pyrophosphate synthase
725	 62.78	0	804584..806845	-	753	50842221	-	PPA0733	-	putative helicase protein
726	 60.40	0	806892..808151	-	419	50842222	-	PPA0734	-	putative carotenoid dehydrogenase
727	 57.48	0	808110..808577	+	155	50842223	-	PPA0735	-	putative hydrolase
728	 61.44	0	808957..809415	+	152	50842224	-	PPA0737	-	18 kDa antigen 2
729	 59.30	0	809488..810858	-	456	50842225	-	PPA0738	-	gluconate permease
730	 56.25	-1	810934..811413	-	159	50842226	-	PPA0739	-	gluconokinase
731	 56.36	-1	811583..812290	+	235	50842227	-	PPA0740	-	GntR family transcriptional regulator
732	 57.76	0	812358..813188	+	276	50842228	-	PPA0741	-	putative GntR-famly transcriptional regulator
733	 61.44	0	813245..816229	-	994	50842229	-	PPA0742	-	glycine dehydrogenase
734	 59.41	0	816235..816606	-	123	50842230	-	PPA0743	-	glycine cleavage system protein H
735	 61.29	0	816646..817761	-	371	50842231	gcvT	PPA0744	-	glycine cleavage system aminomethyltransferase T
736	 61.26	0	818098..818319	-	73	50842232	-	PPA0745	-	hypothetical protein
737	 57.72	0	818343..820556	-	737	50842233	-	PPA0746	-	putative protease
738	 62.47	0	820553..821695	-	380	50842234	-	PPA0747	-	hypothetical protein
739	 59.77	0	821776..822819	-	347	50842235	-	PPA0748	-	magnesium chelatase, subunit ChlI
740	 59.01	0	823041..823523	+	160	50842236	-	PPA0749	-	hypothetical protein
741	 60.06	0	823666..824679	+	337	50842237	-	PPA0750	-	S-adenosyl-methyltransferase MraW
742	 59.78	0	824676..825140	+	154	50842238	-	PPA0751	-	hypothetical protein
743	 59.45	0	825137..827062	+	641	50842239	-	PPA0752	-	cell division protein FtsI/penicillin-binding protein 2
744	 61.40	0	827149..828648	+	499	50842240	-	PPA0753	-	UDP-N-acetylmuramyl tripeptide synthase
745	 60.36	0	828645..830102	+	485	50842241	-	PPA0754	-	UDP-N-acetylmuramyl pentapeptide synthase
746	 55.65	-1	830099..831169	+	356	50842242	mraY	PPA0755	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
747	 61.34	0	831166..832647	+	493	50842243	murD	PPA0756	-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
748	 59.11	0	832607..833929	+	440	50842244	-	PPA0757	-	cell division protein FtsW
749	 61.57	0	833972..835090	+	372	50842245	murG	PPA0758	-	N-acetylglucosaminyl transferase
750	 61.23	0	835102..836517	+	471	50842246	-	PPA0759	-	UDP-N-acetylmuramate--alanine ligase
751	 58.96	0	836517..837230	+	237	50842247	-	PPA0760	-	cell division protein FtsQ
752	 60.85	0	837353..838606	+	417	50842248	-	PPA0761	-	cell division protein FtsZ
753	 59.92	0	838608..839393	+	261	50842249	-	PPA0762	-	hypothetical protein
754	 58.57	0	839520..840038	+	172	50842250	-	PPA0763	-	hypothetical protein
755	 53.95	-1	840049..840339	+	96	50842251	-	PPA0764	-	hypothetical protein
756	 61.60	0	840492..841577	+	361	50842252	-	PPA0765	-	putative immunogenic protein antigen 84
757	 59.64	0	841780..842220	+	146	50842253	-	PPA0766	-	putative DNA-binding protein
758	 59.02	0	842184..842732	+	182	50842254	-	PPA0767	-	lipoprotein signal peptidase
759	 60.04	0	842774..843694	+	306	50842255	-	PPA0768	-	pseudouridylate synthase
760	 59.76	0	843812..845245	+	477	50842256	-	PPA0769	-	pyruvate kinase
761	 57.64	0	845527..845958	+	143	50842257	-	PPA0770	-	CrcB-like protein
762	 56.45	-1	845955..846326	+	123	50842258	-	PPA0771	-	CrcB-like protein
763	 58.61	0	846596..847228	+	210	50842259	-	PPA0772	-	putative two-component system response regulator
764	 62.08	0	847248..847661	-	137	50842260	-	PPA0773	-	ComAB protein
765	 58.73	0	847616..850411	+	931	50842261	-	PPA0774	-	DNA polymerase I
766	 60.25	0	850574..853003	-	809	50842262	-	PPA0775	-	oxidoreductase, putative D-lactate dehydrogenase
767	 64.53	+1	852949..853416	-	155	50842263	-	PPA0776	-	putative oxidoreductase
768	 56.63	-1	853496..854272	-	258	50842264	-	PPA0777	-	hypothetical protein
769	 60.32	0	854597..856093	+	498	50842265	rpsA	PPA0778	-	30S ribosomal protein S1
770	 58.12	0	856313..857716	+	467	50842266	-	PPA0779	-	putative for Fe-transport
771	 59.32	0	857622..858941	+	439	50842267	-	PPA0780	-	hemin receptor precursor
772	 58.45	0	858938..859996	+	352	50842268	-	PPA0781	-	ABC-type transporter, permease component
773	 61.15	0	859996..860775	+	259	50842269	-	PPA0782	-	ABC-type transporter, ATPase component
774	 58.95	0	860799..862508	+	569	50842270	-	PPA0783	-	ABC transporter ATP-binding protein
775	 58.05	0	862505..864175	+	556	50842271	-	PPA0784	-	ABC-type transport system, fused ATPase and permease
776	 60.63	0	864204..864899	+	231	50842272	-	PPA0785	-	dephospho-CoA kinase
777	 53.08	-2	865732..866931	+	399	50842273	-	PPA0786	-	hypothetical protein
778	 53.28	-2	867392..868213	-	273	50842274	-	PPA0787	-	magnesium-chelatase subunit ChlI
779	 58.74	0	868374..870176	-	600	50842275	-	PPA0788	-	magnesium-chelatase subunit
780	 49.16	-2	870292..870708	-	138	50842276	-	PPA0789	-	hypothetical protein
781	 56.33	-1	870744..872156	-	470	50842277	-	PPA0790	-	CobN/magnesium chelatase, putative subunit H
782	 54.74	-1	872003..874576	-	857	50842278	-	PPA0791	-	CobN/magnesium chelatase subunit
783	 57.14	0	874573..875370	-	265	50842279	-	PPA0792	-	iron(III) dicitrate transport system permease protein FecE
784	 57.20	0	875384..876196	-	270	50842280	-	PPA0793	-	iron(III) dicitrate transport system permease protein
785	 48.72	-2	876424..877203	-	259	50842281	-	PPA0794	-	periplasmic binding protein
786	 51.67	-2	877356..877595	+	79	50842282	-	PPA2406	-	hypothetical protein
787	 59.42	0	877803..878078	+	91	50842283	-	PPA0795	-	hypothetical protein
788	 58.33	0	878164..878439	-	91	50842284	-	PPA0796	-	ABC transporter ATP-binding protein
789	 59.57	0	878530..878811	-	93	50842285	-	PPA0797	-	ABC transporter ATP-binding protein
790	 59.61	0	878852..879361	-	169	50842286	-	PPA0798	-	putative permease
791	 59.38	0	879385..879864	-	159	50842287	-	PPA0799	-	hypothetical protein
792	 56.56	-1	879902..880663	-	253	50842288	-	PPA0800	-	hypothetical protein
793	 57.80	0	880966..881247	-	93	50842289	-	PPA0802	-	hypothetical protein
794	 58.12	0	881422..883527	+	701	50842290	-	PPA0803	-	excinuclease ABC subunit B
795	 56.26	-1	883718..884707	+	329	50842291	-	PPA0804	-	TerC family membrane protein
796	 58.90	0	884716..885372	-	218	50842292	-	PPA0805	-	Zn-dependent hydrolase
60.05	MEAN

3.20	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.