IslandPath Analysis: Propionibacterium acnes KPA171202



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 60.05   STD DEV: 3.20
Propionibacterium acnes KPA171202, complete genome - 1..2560265
2297 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
622	 57.24	0	697007..697303	-	98	50842118	-	PPA0631	-	hypothetical protein
623	 55.79	-1	697293..698423	+	376	50842119	-	PPA0632	-	glycine amidinotransferase
624	 53.20	-2	698547..699608	+	353	50842120	-	PPA0633	-	putative permease
625	 57.95	0	699624..700919	+	431	50842121	-	PPA0634	-	proline/betaine transporter
626	 56.32	-1	700932..701540	-	202	50842122	-	PPA0635	-	putative regulator
627	 60.74	0	701664..702743	+	359	50842123	-	PPA0636	-	dipeptidase
628	 60.46	0	702788..703093	+	101	50842124	-	PPA0637	-	hypothetical protein
629	 60.71	0	703134..703301	+	55	50842125	-	PPA0638	-	hypothetical protein
630	 61.27	0	703365..704549	-	394	50842126	-	PPA0639	-	putative glycosyl transferase
631	 59.17	0	704693..705919	+	408	50842127	glgC	PPA0640	-	glucose-1-phosphate adenylyltransferase
632	 61.62	0	706002..706655	-	217	50842128	-	PPA0641	-	methyltransferase
633	 59.52	0	706725..707606	+	293	50842129	-	PPA0642	-	dihydrodipicolinate synthase
634	 57.97	0	707657..708070	+	137	50842130	-	PPA0643	-	sec-independent translocase
635	 62.10	0	708223..709797	-	524	50842131	-	PPA0644	-	endoglycoceramidase
636	 62.19	0	709853..711013	-	386	50842132	-	PPA0645	-	ATP-binding protein
637	 60.27	0	711075..711590	-	171	50842133	-	PPA0646	-	hypothetical protein
638	 62.64	0	711583..712848	-	421	50842134	-	PPA0647	-	putative magnesium (Mg2+) transporter MgtE
639	 57.45	0	712954..713463	+	169	50842135	-	PPA0648	-	hypothetical protein
640	 61.40	0	713577..714449	+	290	50842136	-	PPA0649	-	putative cytochrome oxidase assembly protein
641	 62.06	0	714480..715976	-	498	50842137	-	PPA0650	-	Xaa-Pro aminopeptidase I
642	 53.78	-1	716602..716958	+	118	50842138	-	PPA2404	-	hypothetical protein
643	 60.98	0	717501..718238	+	245	50842139	-	PPA0651	-	hypothetical protein
644	 62.14	0	718048..718599	-	183	50842140	-	PPA0652	-	hypothetical protein
645	 60.00	0	719343..719537	+	64	50842141	-	PPA0653	-	hypothetical protein
646	 60.48	0	719534..719905	+	123	50842142	-	PPA0655	-	hypothetical protein
647	 59.18	0	720198..721412	+	404	50842143	-	PPA0656	-	iron transport system substrate-binding protein
648	 62.71	0	721409..722443	+	344	50842144	-	PPA0657	-	iron transport system, permease protein
649	 61.76	0	722464..723237	+	257	50842145	-	PPA0658	-	ABC transporter, nucleotide binding/ATPase protein
650	 63.29	+1	723234..723854	+	206	50842146	-	PPA0659	-	putative NADH:ubiquinone oxidoreductase
651	 59.97	0	724101..726386	-	761	50842147	-	PPA0660	-	carbon starvation protein A
652	 60.47	0	726769..727623	-	284	50842148	-	PPA0661	-	methionine aminopeptidase
653	 57.14	0	727635..727865	-	76	50842149	-	PPA0662	-	hypothetical protein
654	 60.57	0	728027..728896	-	289	50842150	-	PPA0663	-	hypothetical protein
655	 56.86	0	728895..730301	+	468	50842151	-	PPA0664	-	glutamine synthetase
656	 60.74	0	730320..731162	-	280	50842152	-	PPA0665	-	hypothetical protein
657	 61.18	0	731253..734204	+	983	50842153	-	PPA0666	-	glutamate-ammonia-ligase adenyltransferase
658	 58.65	0	734198..735520	-	440	50842154	-	PPA0667	-	hypothetical protein
659	 63.45	+1	735527..736708	-	393	50842155	-	PPA0668	-	NIF3 (NGG1p interacting factor 3)
660	 60.10	0	736909..737958	+	349	50842156	-	PPA0669	-	hypothetical protein
661	 62.26	0	737973..738608	+	211	50842157	-	PPA0670	-	hypothetical protein
662	 59.07	0	738690..740111	-	473	50842158	-	PPA0671	-	glutamine synthetase
663	 61.97	0	740180..740647	+	155	50842159	-	PPA0672	-	hypothetical protein
664	 61.10	0	740653..741765	+	370	50842160	-	PPA0673	-	putative glycosyl transferase group 1
665	 57.14	0	741789..742397	+	202	50842161	-	PPA0674	-	DedA family protein
666	 61.12	0	742472..743860	-	462	50842162	-	PPA0675	-	PTS system, glucose-specific IIBC component
667	 60.06	0	744036..744761	+	241	50842163	-	PPA0676	-	GntR family transcriptional regulator
668	 59.44	0	744758..745006	+	82	50842164	-	PPA0677	-	PTS system, glucose-specific IIB component
669	 62.77	0	745136..745366	+	76	50842165	-	PPA0678	-	PTS system, glucose-specific IIAB fragment
670	 63.23	0	745366..745860	+	164	50842166	-	PPA0679	-	putative PTS system component IIA
671	 59.90	0	745628..746395	+	255	50842167	-	PPA0680	-	hypothetical protein
672	 59.10	0	746343..747545	-	400	50842168	-	PPA0681	-	hypothetical protein
673	 61.07	0	747509..749314	-	601	50842169	-	PPA0682	-	ABC transporter, ATP-binding protein
674	 61.61	0	749322..750092	-	256	50842170	-	PPA0683	-	hypothetical protein
675	 56.32	-1	750294..751985	-	563	50842171	-	PPA0684	-	sialidase B
676	 59.20	0	752060..754375	-	771	50842172	-	PPA0685	-	sialidase A precursor
677	 56.29	-1	754448..755980	-	510	50842173	-	PPA0686	-	putative sialic acid transporter
678	 58.21	0	756191..756592	+	133	50842174	-	PPA2405	-	hypothetical protein
679	 59.58	0	756689..757492	-	267	50842175	-	PPA0687	-	cAMP factor
680	 54.17	-1	758471..758662	-	63	50842176	-	PPA0688	-	hypothetical protein
681	 59.92	0	758856..759848	-	330	50842177	-	PPA0689	-	lipoyl synthase
682	 60.96	0	759859..762102	-	747	50842178	-	PPA0690	-	cation-transporting P-type ATPase A
683	 60.27	0	762099..764036	-	645	50842179	-	PPA0691	-	putative permease
684	 61.05	0	764092..764910	-	272	50842180	lipB	PPA0692	-	lipoyltransferase
685	 63.76	+1	765084..766457	-	457	50842181	-	PPA0693	-	dihydrolipoamide acyltransferase
686	 62.86	0	766618..768192	-	524	50842182	-	PPA0694	-	putative aminopeptidase
687	 60.83	0	768179..768658	+	159	50842183	-	PPA0695	-	hypothetical protein
688	 56.16	-1	768628..768846	-	72	50842184	-	PPA0696	-	hypothetical protein
689	 62.83	0	768890..769645	-	251	50842185	-	PPA0697	-	hypothetical protein
690	 60.20	0	769844..770647	+	267	50842186	-	PPA0698	-	phage shock protein A
691	 56.70	-1	770644..770934	+	96	50842187	-	PPA0699	-	hypothetical protein
692	 60.17	0	771105..771458	+	117	50842188	-	PPA0700	-	HesB protein, putative for nitrogen fixation
693	 57.87	0	771639..772547	+	302	50842189	-	PPA0701	-	cytochrome c oxidase subunit II
694	 58.12	0	772544..774262	+	572	50842190	-	PPA0702	-	cytochrome c oxidase polypeptide I
695	 61.36	0	774262..774657	+	131	50842191	-	PPA0703	-	hypothetical protein
696	 57.89	0	774709..777147	-	812	50842192	-	PPA0704	-	hypothetical protein
697	 59.32	0	777144..777701	-	185	50842193	-	PPA0705	-	putative ABC transporter ATP-binding protein
698	 54.79	-1	778612..778830	+	72	50842194	-	PPA0706	-	hypothetical protein
699	 63.58	+1	779173..779787	-	204	50842195	-	PPA0707	-	putative nucleoside-diphosphate-sugar epimerase
700	 61.05	0	779894..781354	-	486	50842196	-	PPA0708	-	inositol-5-monophosphate dehydrogenase
701	 63.21	0	781414..781731	+	105	50842197	-	PPA0709	-	putative methyltransferase
702	 59.94	0	781780..783459	-	559	50842198	-	PPA0710	-	cytochrome b subunit
703	 58.88	0	783459..784511	-	350	50842199	-	PPA0711	-	ubiquinol-cytochrome c reductase iron-sulfur subunit
704	 60.20	0	784508..785311	-	267	50842200	-	PPA0712	-	cytochrome c heme-binding subunit
705	 57.22	0	785343..785924	-	193	50842201	-	PPA0713	-	cytochrome c oxidase subunit III
706	 61.11	0	786247..786714	+	155	50842202	-	PPA0714	-	putative response regulator
707	 62.31	0	786998..787708	-	236	50842203	-	PPA0715	-	hypothetical protein
708	 60.99	0	787718..788263	-	181	50842204	-	PPA0716	-	hypothetical protein
709	 62.19	0	788491..789606	-	371	50842205	-	PPA0717	-	putative regulatory protein
710	 61.40	0	789789..790301	+	170	50842206	-	PPA0718	-	peptidyl-prolyl cis-trans isomerase A
711	 59.22	0	790419..791063	+	214	50842207	-	PPA0719	-	hypothetical protein
712	 59.83	0	790983..792884	-	633	50842208	-	PPA0720	-	hypothetical protein
713	 60.28	0	793035..794192	+	385	50842209	-	PPA0721	-	NPL/P60 family secreted protein
714	 59.85	0	794199..795269	+	356	50842210	-	PPA0722	-	glucokinase
715	 62.01	0	795274..795681	-	135	50842211	-	PPA0723	-	hypothetical protein
716	 58.73	0	795741..796496	+	251	50842212	-	PPA0724	-	putative acyltransferase
717	 60.57	0	796663..797220	+	185	50842213	-	PPA0725	-	putative acyltransferase
718	 58.84	0	797294..798712	+	472	50842214	-	PPA0726	-	phospho-2-dehydro-3-deoxyheptonate aldolase
719	 60.03	0	798816..799463	+	215	50842215	-	PPA0727	-	putative Zn-dependent hydrolase
720	 62.38	0	799479..800435	-	318	50842216	-	PPA0728	-	membrane spanning protein DUF6
721	 59.52	0	800485..801897	-	470	50842217	-	PPA0729	-	serine-threonine protein kinase
60.05	MEAN

3.20	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.