version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 876 43.91 0 874119..874676 + 185 145589065 - Pnuc_0882 - 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase 877 44.13 0 874686..876362 + 558 145589066 - Pnuc_0883 - AMP-dependent synthetase and ligase 878 46.88 0 876398..878146 - 582 145589067 - Pnuc_0884 - dihydroxy-acid dehydratase 879 46.02 0 878232..879122 - 296 145589068 - Pnuc_0885 - hypothetical protein 880 41.86 -1 879106..879633 - 175 145589069 - Pnuc_0886 - hypothetical protein 881 44.06 0 879642..880946 - 434 145589070 - Pnuc_0887 - peptidase U32 882 44.27 0 881224..881808 + 194 145589071 - Pnuc_0888 - hypothetical protein 883 46.26 0 881968..882849 + 293 145589072 - Pnuc_0889 - phosphomethylpyrimidine kinase 884 38.89 -2 882980..883321 + 113 145589073 - Pnuc_0890 - hypothetical protein 885 39.29 -2 883318..883653 + 111 145589074 - Pnuc_0891 - hypothetical protein 886 46.06 0 883650..884576 - 308 145589075 - Pnuc_0892 - thiamine-phosphate pyrophosphorylase 887 49.33 +1 884588..885406 - 272 145589076 thiG Pnuc_0893 - thiazole synthase 888 40.40 -1 885431..885628 - 65 145589077 - Pnuc_0894 - thiamine biosynthesis protein ThiS 889 44.90 0 885619..886716 - 365 145589078 - Pnuc_0895 - FAD dependent oxidoreductase 890 46.55 0 886777..888720 - 647 145589079 - Pnuc_0896 - thiamine biosynthesis protein ThiC 891 47.36 0 888942..889775 - 277 145589080 - Pnuc_0897 - NUDIX hydrolase 892 45.42 0 890284..891516 - 410 145589081 - Pnuc_0898 - major facilitator transporter 893 48.05 +1 891516..892799 - 427 145589082 - Pnuc_0899 - Formyl-CoA transferase 894 46.61 0 892817..894805 + 662 145589083 - Pnuc_0900 - DNA topoisomerase IV subunit B 895 45.89 0 894877..897258 + 793 145589084 - Pnuc_0901 - DNA topoisomerase IV subunit A 896 47.29 0 897280..898239 - 319 145589085 - Pnuc_0902 - hypothetical protein 897 43.78 0 898289..898939 + 216 145589086 - Pnuc_0903 - hypothetical protein 898 46.71 0 898936..899391 - 151 145589087 - Pnuc_0904 - endoribonuclease L-PSP 899 43.88 0 899427..900602 - 391 145589088 - Pnuc_0905 - hypothetical protein 900 44.25 0 900633..901502 - 289 145589089 - Pnuc_0906 - ATPase 901 46.45 0 901677..902042 + 121 145589090 - Pnuc_0907 - putative periplasmic cytochrome type-c oxidoreductase signal peptide protein 902 44.54 0 902056..902421 + 121 145589091 - Pnuc_0908 - cytochrome c, class I 903 44.44 0 902488..903126 - 212 145589092 - Pnuc_0909 - GntR family transcriptional regulator 904 45.63 0 903188..905407 + 739 145589093 - Pnuc_0910 - methylmalonyl-CoA mutase 905 45.22 0 905423..906448 + 341 145589094 - Pnuc_0911 - arginine/ornithine transport system ATPase 906 44.81 0 906459..907991 + 510 145589095 - Pnuc_0912 - carboxyl transferase 907 44.67 0 908007..910043 + 678 145589096 - Pnuc_0913 - acetyl-CoA carboxylase, biotin carboxylase 908 44.66 0 910059..910526 + 155 145589097 - Pnuc_0914 - lactoylglutathione lyase 909 46.02 0 910617..911294 + 225 145589098 - Pnuc_0915 - peptidase M22, glycoprotease 910 45.90 0 911294..911842 + 182 145589099 - Pnuc_0916 - ribosomal-protein-alanine acetyltransferase 911 45.19 0 911839..912378 + 179 145589100 - Pnuc_0917 - hypothetical protein 912 44.85 0 912420..913739 - 439 145589101 - Pnuc_0918 - hypothetical protein 913 46.31 0 913789..914913 + 374 145589102 - Pnuc_0919 - alanine racemase 914 45.16 0 914985..915872 - 295 145589103 - Pnuc_0920 - putative transmembrane protein 915 50.05 +1 915977..916933 + 318 145589104 - Pnuc_0921 - RluA family pseudouridine synthase 916 44.91 0 916930..917715 + 261 145589105 - Pnuc_0922 - hypothetical protein 917 42.34 0 917835..919466 + 543 145589106 - Pnuc_0923 - poly(R)-hydroxyalkanoic acid synthase, class I 918 46.02 0 919508..920248 + 246 145589107 fabG Pnuc_0924 - 3-ketoacyl-(acyl-carrier-protein) reductase 919 43.14 0 920359..920919 + 186 145589108 - Pnuc_0925 - polyhydroxyalkonate synthesis repressor, PhaR 920 44.67 0 920922..922280 + 452 145589109 - Pnuc_0926 - MiaB-like tRNA modifying enzyme YliG 921 46.58 0 922362..923546 + 394 145589110 - Pnuc_0927 - beta-ketothiolase 922 48.04 +1 923587..924477 - 296 145589111 - Pnuc_0928 - phosphoserine phosphatase SerB 923 45.98 0 924498..928040 - 1180 145589112 - Pnuc_0929 - transcription-repair coupling factor 924 45.68 0 928064..928816 + 250 145589113 - Pnuc_0930 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 925 48.02 +1 928827..929330 + 167 145589114 - Pnuc_0931 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 926 43.32 0 929377..929967 + 196 145589115 - Pnuc_0932 - hypothetical protein 927 43.57 0 930179..931516 + 445 145589116 - Pnuc_0933 - trigger factor 928 46.35 0 931548..932177 + 209 145589117 - Pnuc_0934 - ATP-dependent Clp protease, proteolytic subunit ClpP 929 42.58 0 932216..933577 + 453 145589118 clpX Pnuc_0935 - ATP-dependent protease ATP-binding subunit 930 44.39 0 933757..936189 + 810 145589119 - Pnuc_0936 - ATP-dependent protease La 931 43.58 0 936481..937944 + 487 145589120 - Pnuc_0937 - hypothetical protein 932 40.91 -1 937962..938621 - 219 145589121 - Pnuc_0938 - arylesterase 933 47.56 0 938624..939298 + 224 145589122 - Pnuc_0939 - ABC transporter related 934 46.01 0 939320..943357 + 1345 145589123 - Pnuc_0940 - phosphoribosylformylglycinamidine synthase 935 43.25 0 943370..944125 + 251 145589124 - Pnuc_0941 - hypothetical protein 936 46.25 0 944219..946804 - 861 145589125 - Pnuc_0942 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 937 41.80 -1 946964..947152 - 62 145589126 - Pnuc_0943 - hypothetical protein 938 44.07 0 947160..947606 - 148 145589127 - Pnuc_0944 - hypothetical protein 939 45.25 0 947693..949354 + 553 145589128 - Pnuc_0945 - CTP synthetase 940 44.21 0 949365..950228 + 287 145589129 - Pnuc_0946 - 2-dehydro-3-deoxyphosphooctonate aldolase 941 44.37 0 950279..951565 + 428 145589130 eno Pnuc_0947 - phosphopyruvate hydratase 942 45.28 0 951585..951902 + 105 145589131 - Pnuc_0948 - septum formation initiator 943 47.20 0 951913..952878 - 321 145589132 - Pnuc_0949 - Hsp33 protein 944 43.57 0 952934..954340 + 468 145589133 - Pnuc_0950 - glutamyl-tRNA synthetase 945 42.18 -1 954767..955501 - 244 145589134 - Pnuc_0951 - hypothetical protein 946 42.92 0 955552..956427 - 291 145589135 - Pnuc_0952 - hypothetical protein 947 36.97 -2 956557..956913 + 118 145589136 - Pnuc_0953 - hypothetical protein 948 39.24 -2 956913..957149 + 78 145589137 - Pnuc_0954 - phosphopantetheine-binding 949 44.95 0 957146..958393 + 415 145589138 - Pnuc_0955 - beta-ketoacyl synthase 950 36.67 -2 958396..958755 - 119 145589139 - Pnuc_0956 - hypothetical protein 951 39.41 -2 958766..959374 - 202 145589140 - Pnuc_0957 - hypothetical protein 952 42.78 0 959533..960432 + 299 145589141 - Pnuc_0958 - 2-hydroxy-3-oxopropionate reductase 953 44.50 0 960442..961032 + 196 145589142 - Pnuc_0959 - hypothetical protein 954 44.91 0 961120..961689 + 189 145589143 - Pnuc_0960 - HNH endonuclease 955 42.46 0 961701..962675 + 324 145589144 - Pnuc_0961 - hypothetical protein 956 41.71 -1 962679..963203 - 174 145589145 - Pnuc_0962 - Ion transport 2 domain-containing protein 957 42.62 0 963264..963974 - 236 145589146 - Pnuc_0963 - ankyrin 958 43.18 0 963971..964762 - 263 145589147 - Pnuc_0964 - TatD family hydrolase 959 45.33 0 964794..965927 - 377 145589148 - Pnuc_0965 - DNA-directed DNA polymerase 960 42.02 -1 965940..966584 - 214 145589149 - Pnuc_0966 - dTMP kinase 961 41.99 -1 966599..967672 - 357 145589150 - Pnuc_0967 - aminodeoxychorismate lyase 962 44.41 0 967693..968703 + 336 145589151 - Pnuc_0968 - glycine cleavage T protein (aminomethyl transferase) 963 45.92 0 968721..969578 + 285 145589152 - Pnuc_0969 - hypothetical protein 964 46.17 0 969582..970064 - 160 145589153 - Pnuc_0970 - thioesterase superfamily protein 965 44.17 0 970120..971586 + 488 145589154 - Pnuc_0971 - hypothetical protein 966 45.43 0 971616..972020 + 134 145589155 - Pnuc_0972 - methionine-R-sulfoxide reductase 967 38.43 -2 972053..972601 + 182 145589156 - Pnuc_0973 - intracellular septation protein A 968 46.32 0 972598..972882 + 94 145589157 - Pnuc_0974 - BolA family protein 969 42.68 0 972941..973732 + 263 145589158 - Pnuc_0975 - PpiC-type peptidyl-prolyl cis-trans isomerase 970 44.24 0 973746..974909 - 387 145589159 - Pnuc_0976 - major facilitator transporter 971 48.21 +1 974925..976040 - 371 145589160 - Pnuc_0977 - chorismate synthase 972 44.52 0 976083..976538 - 151 145589161 - Pnuc_0978 - CBS domain-containing protein 973 41.22 -1 976616..977464 - 282 145589162 - Pnuc_0979 - putative ribonuclease BN 974 52.22 +2 977487..978095 + 202 145589163 - Pnuc_0980 - flavodoxin/nitric oxide synthase 975 40.20 -1 978105..978497 + 130 145589164 - Pnuc_0981 - membrane protein-like protein 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0