version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 853 44.85 0 850442..851257 - 271 145589042 - Pnuc_0857 - TPR repeat-containing protein 854 46.48 0 851345..852766 + 473 145589043 - Pnuc_0858 - cysteinyl-tRNA synthetase 855 45.66 0 852766..853422 + 218 145589044 - Pnuc_0859 - HhH-GPD family protein 856 45.16 0 853432..854403 + 323 145589045 - Pnuc_0860 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 857 46.95 0 854369..855697 + 442 145589046 - Pnuc_0861 - tRNA(Ile)-lysidine synthetase 858 45.80 0 855748..856998 + 416 145589047 - Pnuc_0862 - aspartate kinase 859 42.84 0 857403..858170 + 255 145589048 - Pnuc_0863 - metallophosphoesterase 860 45.34 0 858200..859507 - 435 145589049 - Pnuc_0864 - HipA domain-containing protein 861 51.17 +2 859507..859848 - 113 145589050 - Pnuc_0865 - XRE family transcriptional regulator 862 45.98 0 861113..862693 + 526 145589051 - Pnuc_0868 - RND efflux system outer membrane lipoprotein 863 42.12 -1 862918..863976 + 352 145589052 - Pnuc_0869 - RND family efflux transporter MFP subunit 864 44.93 0 863979..867107 + 1042 145589053 - Pnuc_0870 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 865 44.23 0 867196..867654 + 152 145589054 - Pnuc_0871 - hypothetical protein 866 45.90 0 867749..868942 + 397 145589055 - Pnuc_0872 - Formyl-CoA transferase 867 45.48 0 868956..869885 + 309 145589056 - Pnuc_0873 - pyruvate carboxyltransferase 868 41.49 -1 870147..870722 + 191 145589057 - Pnuc_0874 - hypothetical protein 869 41.11 -1 870827..871366 - 179 145589058 - Pnuc_0875 - hypothetical protein 870 40.74 -1 871744..872040 + 98 145589059 - Pnuc_0876 - hypothetical protein 871 46.32 0 872070..872531 + 153 145589060 - Pnuc_0877 - Smr protein/MutS2 872 45.10 0 872562..872918 + 118 145589061 - Pnuc_0878 - protein of unknown function DUF883, ElaB 873 38.48 -2 872925..873293 + 122 145589062 - Pnuc_0879 - putative transmembrane protein 874 46.45 0 873290..873571 + 93 145589063 - Pnuc_0880 - hypothetical protein 875 44.70 0 873589..874107 - 172 145589064 - Pnuc_0881 - adenine phosphoribosyltransferase 876 43.91 0 874119..874676 + 185 145589065 - Pnuc_0882 - 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase 877 44.13 0 874686..876362 + 558 145589066 - Pnuc_0883 - AMP-dependent synthetase and ligase 878 46.88 0 876398..878146 - 582 145589067 - Pnuc_0884 - dihydroxy-acid dehydratase 879 46.02 0 878232..879122 - 296 145589068 - Pnuc_0885 - hypothetical protein 880 41.86 -1 879106..879633 - 175 145589069 - Pnuc_0886 - hypothetical protein 881 44.06 0 879642..880946 - 434 145589070 - Pnuc_0887 - peptidase U32 882 44.27 0 881224..881808 + 194 145589071 - Pnuc_0888 - hypothetical protein 883 46.26 0 881968..882849 + 293 145589072 - Pnuc_0889 - phosphomethylpyrimidine kinase 884 38.89 -2 882980..883321 + 113 145589073 - Pnuc_0890 - hypothetical protein 885 39.29 -2 883318..883653 + 111 145589074 - Pnuc_0891 - hypothetical protein 886 46.06 0 883650..884576 - 308 145589075 - Pnuc_0892 - thiamine-phosphate pyrophosphorylase 887 49.33 +1 884588..885406 - 272 145589076 thiG Pnuc_0893 - thiazole synthase 888 40.40 -1 885431..885628 - 65 145589077 - Pnuc_0894 - thiamine biosynthesis protein ThiS 889 44.90 0 885619..886716 - 365 145589078 - Pnuc_0895 - FAD dependent oxidoreductase 890 46.55 0 886777..888720 - 647 145589079 - Pnuc_0896 - thiamine biosynthesis protein ThiC 891 47.36 0 888942..889775 - 277 145589080 - Pnuc_0897 - NUDIX hydrolase 892 45.42 0 890284..891516 - 410 145589081 - Pnuc_0898 - major facilitator transporter 893 48.05 +1 891516..892799 - 427 145589082 - Pnuc_0899 - Formyl-CoA transferase 894 46.61 0 892817..894805 + 662 145589083 - Pnuc_0900 - DNA topoisomerase IV subunit B 895 45.89 0 894877..897258 + 793 145589084 - Pnuc_0901 - DNA topoisomerase IV subunit A 896 47.29 0 897280..898239 - 319 145589085 - Pnuc_0902 - hypothetical protein 897 43.78 0 898289..898939 + 216 145589086 - Pnuc_0903 - hypothetical protein 898 46.71 0 898936..899391 - 151 145589087 - Pnuc_0904 - endoribonuclease L-PSP 899 43.88 0 899427..900602 - 391 145589088 - Pnuc_0905 - hypothetical protein 900 44.25 0 900633..901502 - 289 145589089 - Pnuc_0906 - ATPase 901 46.45 0 901677..902042 + 121 145589090 - Pnuc_0907 - putative periplasmic cytochrome type-c oxidoreductase signal peptide protein 902 44.54 0 902056..902421 + 121 145589091 - Pnuc_0908 - cytochrome c, class I 903 44.44 0 902488..903126 - 212 145589092 - Pnuc_0909 - GntR family transcriptional regulator 904 45.63 0 903188..905407 + 739 145589093 - Pnuc_0910 - methylmalonyl-CoA mutase 905 45.22 0 905423..906448 + 341 145589094 - Pnuc_0911 - arginine/ornithine transport system ATPase 906 44.81 0 906459..907991 + 510 145589095 - Pnuc_0912 - carboxyl transferase 907 44.67 0 908007..910043 + 678 145589096 - Pnuc_0913 - acetyl-CoA carboxylase, biotin carboxylase 908 44.66 0 910059..910526 + 155 145589097 - Pnuc_0914 - lactoylglutathione lyase 909 46.02 0 910617..911294 + 225 145589098 - Pnuc_0915 - peptidase M22, glycoprotease 910 45.90 0 911294..911842 + 182 145589099 - Pnuc_0916 - ribosomal-protein-alanine acetyltransferase 911 45.19 0 911839..912378 + 179 145589100 - Pnuc_0917 - hypothetical protein 912 44.85 0 912420..913739 - 439 145589101 - Pnuc_0918 - hypothetical protein 913 46.31 0 913789..914913 + 374 145589102 - Pnuc_0919 - alanine racemase 914 45.16 0 914985..915872 - 295 145589103 - Pnuc_0920 - putative transmembrane protein 915 50.05 +1 915977..916933 + 318 145589104 - Pnuc_0921 - RluA family pseudouridine synthase 916 44.91 0 916930..917715 + 261 145589105 - Pnuc_0922 - hypothetical protein 917 42.34 0 917835..919466 + 543 145589106 - Pnuc_0923 - poly(R)-hydroxyalkanoic acid synthase, class I 918 46.02 0 919508..920248 + 246 145589107 fabG Pnuc_0924 - 3-ketoacyl-(acyl-carrier-protein) reductase 919 43.14 0 920359..920919 + 186 145589108 - Pnuc_0925 - polyhydroxyalkonate synthesis repressor, PhaR 920 44.67 0 920922..922280 + 452 145589109 - Pnuc_0926 - MiaB-like tRNA modifying enzyme YliG 921 46.58 0 922362..923546 + 394 145589110 - Pnuc_0927 - beta-ketothiolase 922 48.04 +1 923587..924477 - 296 145589111 - Pnuc_0928 - phosphoserine phosphatase SerB 923 45.98 0 924498..928040 - 1180 145589112 - Pnuc_0929 - transcription-repair coupling factor 924 45.68 0 928064..928816 + 250 145589113 - Pnuc_0930 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 925 48.02 +1 928827..929330 + 167 145589114 - Pnuc_0931 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 926 43.32 0 929377..929967 + 196 145589115 - Pnuc_0932 - hypothetical protein 927 43.57 0 930179..931516 + 445 145589116 - Pnuc_0933 - trigger factor 928 46.35 0 931548..932177 + 209 145589117 - Pnuc_0934 - ATP-dependent Clp protease, proteolytic subunit ClpP 929 42.58 0 932216..933577 + 453 145589118 clpX Pnuc_0935 - ATP-dependent protease ATP-binding subunit 930 44.39 0 933757..936189 + 810 145589119 - Pnuc_0936 - ATP-dependent protease La 931 43.58 0 936481..937944 + 487 145589120 - Pnuc_0937 - hypothetical protein 932 40.91 -1 937962..938621 - 219 145589121 - Pnuc_0938 - arylesterase 933 47.56 0 938624..939298 + 224 145589122 - Pnuc_0939 - ABC transporter related 934 46.01 0 939320..943357 + 1345 145589123 - Pnuc_0940 - phosphoribosylformylglycinamidine synthase 935 43.25 0 943370..944125 + 251 145589124 - Pnuc_0941 - hypothetical protein 936 46.25 0 944219..946804 - 861 145589125 - Pnuc_0942 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 937 41.80 -1 946964..947152 - 62 145589126 - Pnuc_0943 - hypothetical protein 938 44.07 0 947160..947606 - 148 145589127 - Pnuc_0944 - hypothetical protein 939 45.25 0 947693..949354 + 553 145589128 - Pnuc_0945 - CTP synthetase 940 44.21 0 949365..950228 + 287 145589129 - Pnuc_0946 - 2-dehydro-3-deoxyphosphooctonate aldolase 941 44.37 0 950279..951565 + 428 145589130 eno Pnuc_0947 - phosphopyruvate hydratase 942 45.28 0 951585..951902 + 105 145589131 - Pnuc_0948 - septum formation initiator 943 47.20 0 951913..952878 - 321 145589132 - Pnuc_0949 - Hsp33 protein 944 43.57 0 952934..954340 + 468 145589133 - Pnuc_0950 - glutamyl-tRNA synthetase 945 42.18 -1 954767..955501 - 244 145589134 - Pnuc_0951 - hypothetical protein 946 42.92 0 955552..956427 - 291 145589135 - Pnuc_0952 - hypothetical protein 947 36.97 -2 956557..956913 + 118 145589136 - Pnuc_0953 - hypothetical protein 948 39.24 -2 956913..957149 + 78 145589137 - Pnuc_0954 - phosphopantetheine-binding 949 44.95 0 957146..958393 + 415 145589138 - Pnuc_0955 - beta-ketoacyl synthase 950 36.67 -2 958396..958755 - 119 145589139 - Pnuc_0956 - hypothetical protein 951 39.41 -2 958766..959374 - 202 145589140 - Pnuc_0957 - hypothetical protein 952 42.78 0 959533..960432 + 299 145589141 - Pnuc_0958 - 2-hydroxy-3-oxopropionate reductase 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0