version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 808 46.35 0 805419..805856 + 145 145588997 - Pnuc_0812 - protein of unknown function DUF395, YeeE/YedE 809 42.28 0 805858..806304 + 148 145588998 - Pnuc_0813 - protein of unknown function DUF395, YeeE/YedE 810 42.19 -1 806316..806699 + 127 145588999 - Pnuc_0814 - hypothetical protein 811 45.95 0 806720..807139 + 139 145589000 - Pnuc_0815 - thioesterase superfamily protein 812 43.72 0 807149..808246 + 365 145589001 - Pnuc_0816 - rhodanese domain-containing protein 813 43.38 0 808377..810386 + 669 145589002 - Pnuc_0817 - cytochrome c, class I 814 48.69 +1 810473..811651 - 392 145589003 - Pnuc_0818 - acyl-CoA dehydrogenase domain-containing protein 815 46.55 0 811746..812456 + 236 145589004 - Pnuc_0819 - hypothetical protein 816 45.77 0 812591..814174 + 527 145589005 - Pnuc_0820 - ABC transporter related 817 45.83 0 814214..814477 - 87 145589006 - Pnuc_0821 - hypothetical protein 818 44.16 0 814474..815646 - 390 145589007 - Pnuc_0822 - hypothetical protein 819 44.96 0 815649..816035 - 128 145589008 - Pnuc_0823 - lactoylglutathione lyase 820 45.60 0 816039..817709 - 556 145589009 - Pnuc_0824 - electron-transferring-flavoprotein dehydrogenase 821 44.59 0 817866..818567 + 233 145589010 - Pnuc_0825 - 3-oxoacid CoA-transferase, A subunit 822 45.78 0 818606..819256 + 216 145589011 - Pnuc_0826 - 3-oxoacid CoA-transferase, B subunit 823 45.40 0 819291..821171 + 626 145589012 - Pnuc_0827 - cation diffusion facilitator family transporter 824 47.12 0 821181..823211 + 676 145589013 - Pnuc_0828 - (p)ppGpp synthetase I, SpoT/RelA 825 45.76 0 823405..825327 + 640 145589014 - Pnuc_0829 - threonyl-tRNA synthetase 826 47.06 0 825385..825894 + 169 145589015 - Pnuc_0830 - translation initiation factor IF-3 827 48.48 +1 826035..826232 + 65 145589016 - Pnuc_0831 - ribosomal protein L35 828 48.09 +1 826258..826623 + 121 145589017 - Pnuc_0832 - ribosomal protein L20 829 46.90 0 826650..827696 + 348 145589018 - Pnuc_0833 - phenylalanyl-tRNA synthetase, alpha subunit 830 45.75 0 827720..830176 + 818 145589019 - Pnuc_0834 - phenylalanyl-tRNA synthetase, beta subunit 831 43.52 0 830222..830545 + 107 145589020 - Pnuc_0835 - integration host factor, alpha subunit 832 48.15 +1 830523..830873 + 116 145589021 - Pnuc_0836 - MerR family transcriptional regulator 833 48.07 +1 831024..831464 + 146 145589022 - Pnuc_0837 - thioesterase superfamily protein 834 44.91 0 831667..831951 + 94 145589023 - Pnuc_0838 - histone family protein nucleoid-structuring protein H-NS 835 42.10 -1 832022..832717 - 231 145589024 - Pnuc_0839 - DNA binding domain-containing protein 836 46.71 0 833018..835873 + 951 145589025 kgd Pnuc_0840 - alpha-ketoglutarate decarboxylase 837 46.43 0 835924..837099 + 391 145589026 - Pnuc_0841 - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 838 45.44 0 837112..838548 + 478 145589027 - Pnuc_0842 - dihydrolipoamide dehydrogenase 839 45.29 0 838549..839652 + 367 145589028 - Pnuc_0843 - AFG1 family ATPase 840 45.35 0 839662..840510 + 282 145589029 - Pnuc_0844 - phosphotransferase domain-containing protein 841 46.22 0 840541..841743 + 400 145589030 - Pnuc_0845 - tryptophanyl-tRNA synthetase 842 48.28 +1 841795..842316 + 173 145589031 - Pnuc_0846 - hypothetical protein 843 46.43 0 842343..843266 + 307 145589032 - Pnuc_0847 - dihydrodipicolinate synthase 844 45.55 0 843263..844408 + 381 145589033 - Pnuc_0848 - NlpB/DapX family lipoprotein 845 52.98 +2 844482..844649 - 55 145589034 - Pnuc_0849 - hypothetical protein 846 46.72 0 844761..845993 - 410 145589035 - Pnuc_0850 - cupin 4 family protein 847 46.47 0 846027..846650 + 207 145589036 - Pnuc_0851 - putative FkbP-type peptidyl-prolyl cis-trans isomerase 848 46.25 0 846654..847412 - 252 145589037 - Pnuc_0852 - serine O-acetyltransferase 849 50.07 +1 847436..848188 - 250 145589038 - Pnuc_0853 - RNA methyltransferase 850 47.40 0 848316..849104 + 262 145589039 - Pnuc_0854 - inositol monophosphatase 851 44.49 0 849149..849937 - 262 145589040 - Pnuc_0855 - UDP-2,3-diacylglucosamine hydrolase 852 43.85 0 849934..850437 - 167 145589041 - Pnuc_0856 - peptidylprolyl isomerase 853 44.85 0 850442..851257 - 271 145589042 - Pnuc_0857 - TPR repeat-containing protein 854 46.48 0 851345..852766 + 473 145589043 - Pnuc_0858 - cysteinyl-tRNA synthetase 855 45.66 0 852766..853422 + 218 145589044 - Pnuc_0859 - HhH-GPD family protein 856 45.16 0 853432..854403 + 323 145589045 - Pnuc_0860 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 857 46.95 0 854369..855697 + 442 145589046 - Pnuc_0861 - tRNA(Ile)-lysidine synthetase 858 45.80 0 855748..856998 + 416 145589047 - Pnuc_0862 - aspartate kinase 859 42.84 0 857403..858170 + 255 145589048 - Pnuc_0863 - metallophosphoesterase 860 45.34 0 858200..859507 - 435 145589049 - Pnuc_0864 - HipA domain-containing protein 861 51.17 +2 859507..859848 - 113 145589050 - Pnuc_0865 - XRE family transcriptional regulator 862 45.98 0 861113..862693 + 526 145589051 - Pnuc_0868 - RND efflux system outer membrane lipoprotein 863 42.12 -1 862918..863976 + 352 145589052 - Pnuc_0869 - RND family efflux transporter MFP subunit 864 44.93 0 863979..867107 + 1042 145589053 - Pnuc_0870 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 865 44.23 0 867196..867654 + 152 145589054 - Pnuc_0871 - hypothetical protein 866 45.90 0 867749..868942 + 397 145589055 - Pnuc_0872 - Formyl-CoA transferase 867 45.48 0 868956..869885 + 309 145589056 - Pnuc_0873 - pyruvate carboxyltransferase 868 41.49 -1 870147..870722 + 191 145589057 - Pnuc_0874 - hypothetical protein 869 41.11 -1 870827..871366 - 179 145589058 - Pnuc_0875 - hypothetical protein 870 40.74 -1 871744..872040 + 98 145589059 - Pnuc_0876 - hypothetical protein 871 46.32 0 872070..872531 + 153 145589060 - Pnuc_0877 - Smr protein/MutS2 872 45.10 0 872562..872918 + 118 145589061 - Pnuc_0878 - protein of unknown function DUF883, ElaB 873 38.48 -2 872925..873293 + 122 145589062 - Pnuc_0879 - putative transmembrane protein 874 46.45 0 873290..873571 + 93 145589063 - Pnuc_0880 - hypothetical protein 875 44.70 0 873589..874107 - 172 145589064 - Pnuc_0881 - adenine phosphoribosyltransferase 876 43.91 0 874119..874676 + 185 145589065 - Pnuc_0882 - 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase 877 44.13 0 874686..876362 + 558 145589066 - Pnuc_0883 - AMP-dependent synthetase and ligase 878 46.88 0 876398..878146 - 582 145589067 - Pnuc_0884 - dihydroxy-acid dehydratase 879 46.02 0 878232..879122 - 296 145589068 - Pnuc_0885 - hypothetical protein 880 41.86 -1 879106..879633 - 175 145589069 - Pnuc_0886 - hypothetical protein 881 44.06 0 879642..880946 - 434 145589070 - Pnuc_0887 - peptidase U32 882 44.27 0 881224..881808 + 194 145589071 - Pnuc_0888 - hypothetical protein 883 46.26 0 881968..882849 + 293 145589072 - Pnuc_0889 - phosphomethylpyrimidine kinase 884 38.89 -2 882980..883321 + 113 145589073 - Pnuc_0890 - hypothetical protein 885 39.29 -2 883318..883653 + 111 145589074 - Pnuc_0891 - hypothetical protein 886 46.06 0 883650..884576 - 308 145589075 - Pnuc_0892 - thiamine-phosphate pyrophosphorylase 887 49.33 +1 884588..885406 - 272 145589076 thiG Pnuc_0893 - thiazole synthase 888 40.40 -1 885431..885628 - 65 145589077 - Pnuc_0894 - thiamine biosynthesis protein ThiS 889 44.90 0 885619..886716 - 365 145589078 - Pnuc_0895 - FAD dependent oxidoreductase 890 46.55 0 886777..888720 - 647 145589079 - Pnuc_0896 - thiamine biosynthesis protein ThiC 891 47.36 0 888942..889775 - 277 145589080 - Pnuc_0897 - NUDIX hydrolase 892 45.42 0 890284..891516 - 410 145589081 - Pnuc_0898 - major facilitator transporter 893 48.05 +1 891516..892799 - 427 145589082 - Pnuc_0899 - Formyl-CoA transferase 894 46.61 0 892817..894805 + 662 145589083 - Pnuc_0900 - DNA topoisomerase IV subunit B 895 45.89 0 894877..897258 + 793 145589084 - Pnuc_0901 - DNA topoisomerase IV subunit A 896 47.29 0 897280..898239 - 319 145589085 - Pnuc_0902 - hypothetical protein 897 43.78 0 898289..898939 + 216 145589086 - Pnuc_0903 - hypothetical protein 898 46.71 0 898936..899391 - 151 145589087 - Pnuc_0904 - endoribonuclease L-PSP 899 43.88 0 899427..900602 - 391 145589088 - Pnuc_0905 - hypothetical protein 900 44.25 0 900633..901502 - 289 145589089 - Pnuc_0906 - ATPase 901 46.45 0 901677..902042 + 121 145589090 - Pnuc_0907 - putative periplasmic cytochrome type-c oxidoreductase signal peptide protein 902 44.54 0 902056..902421 + 121 145589091 - Pnuc_0908 - cytochrome c, class I 903 44.44 0 902488..903126 - 212 145589092 - Pnuc_0909 - GntR family transcriptional regulator 904 45.63 0 903188..905407 + 739 145589093 - Pnuc_0910 - methylmalonyl-CoA mutase 905 45.22 0 905423..906448 + 341 145589094 - Pnuc_0911 - arginine/ornithine transport system ATPase 906 44.81 0 906459..907991 + 510 145589095 - Pnuc_0912 - carboxyl transferase 907 44.67 0 908007..910043 + 678 145589096 - Pnuc_0913 - acetyl-CoA carboxylase, biotin carboxylase 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0