version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 585 43.82 0 574917..575669 + 250 145588774 - Pnuc_0589 - hypothetical protein 586 43.43 0 575942..576139 - 65 145588775 - Pnuc_0590 - hypothetical protein 587 41.23 -1 576142..576660 - 172 145588776 - Pnuc_0591 - hypothetical protein 588 44.85 0 577031..578011 - 326 145588777 - Pnuc_0592 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 589 45.65 0 578094..579035 - 313 145588778 - Pnuc_0593 - 2-keto-3-deoxygluconate permease 590 44.78 0 579331..580230 + 299 145588779 - Pnuc_0594 - 2-hydroxy-3-oxopropionate reductase 591 46.55 0 580610..581956 - 448 145588780 - Pnuc_0595 - N-acetylmuramoyl-L-alanine amidase 592 44.07 0 581960..582490 - 176 145588781 - Pnuc_0596 - hypothetical protein 593 46.76 0 582533..583627 + 364 145588782 - Pnuc_0597 - putative iron-sulfur cluster binding protein 594 47.33 0 583670..584455 + 261 145588783 - Pnuc_0598 - AzlC family protein 595 49.00 +1 584455..584805 + 116 145588784 - Pnuc_0599 - hypothetical protein 596 47.11 0 584847..587924 - 1025 145588785 - Pnuc_0600 - FAD linked oxidase domain-containing protein 597 46.93 0 587921..588604 - 227 145588786 - Pnuc_0601 - GntR family transcriptional regulator 598 47.26 0 588807..589991 + 394 145588787 - Pnuc_0602 - Serine--glyoxylate transaminase 599 45.59 0 590124..590531 + 135 145588788 - Pnuc_0603 - hypothetical protein 600 47.82 +1 590538..591959 + 473 145588789 - Pnuc_0604 - DEAD/DEAH box helicase domain-containing protein 601 48.48 +1 591970..592920 - 316 145588790 - Pnuc_0605 - glutamate--tRNA ligase 602 47.22 0 592924..596538 + 1204 145588791 - Pnuc_0606 - DNA polymerase III, alpha subunit 603 46.43 0 596560..597720 - 386 145588792 - Pnuc_0607 - glycosyl transferase family protein 604 45.12 0 597723..598511 - 262 145588793 - Pnuc_0608 - glycosyl transferase family protein 605 49.87 +1 598508..599269 - 253 145588794 - Pnuc_0609 - glycosyl transferase family protein 606 44.39 0 599280..601043 + 587 145588795 - Pnuc_0610 - lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 607 45.97 0 601068..602531 - 487 145588796 - Pnuc_0611 - ribonuclease 608 48.01 +1 602528..603154 - 208 145588797 - Pnuc_0612 - maf protein 609 50.00 +1 603147..603590 - 147 145588798 - Pnuc_0613 - hypothetical protein 610 46.92 0 603621..604010 - 129 145588799 - Pnuc_0614 - iojap-like protein 611 44.35 0 604058..604747 - 229 145588800 - Pnuc_0615 - nicotinate (nicotinamide) nucleotide adenylyltransferase 612 46.30 0 604744..605676 - 310 145588801 - Pnuc_0616 - coproporphyrinogen III oxidase 613 48.36 +1 605692..606969 - 425 145588802 - Pnuc_0617 - phosphoribosylamine--glycine ligase 614 46.39 0 606999..607718 - 239 145588803 - Pnuc_0618 - hypothetical protein 615 38.75 -2 608060..608872 + 270 145588804 - Pnuc_0619 - hypothetical protein 616 47.03 0 608903..609844 - 313 145588805 - Pnuc_0620 - transcriptional regulator CysB-like protein 617 45.11 0 609908..611062 - 384 145588806 - Pnuc_0621 - permease YjgP/YjgQ family protein 618 45.16 0 611059..612174 - 371 145588807 - Pnuc_0622 - permease YjgP/YjgQ family protein 619 46.06 0 612335..613945 + 536 145588808 - Pnuc_0623 - leucyl aminopeptidase 620 47.01 0 613949..614416 + 155 145588809 - Pnuc_0624 - DNA polymerase III chi subunit, HolC 621 46.69 0 614445..615230 + 261 145588810 - Pnuc_0625 - prolipoprotein diacylglyceryl transferase 622 44.99 0 615242..616150 + 302 145588811 - Pnuc_0626 - LysR family transcriptional regulator 623 45.98 0 616283..617587 + 434 145588812 - Pnuc_0627 - malonyl-CoA decarboxylase 624 43.96 0 617727..618761 + 344 145588813 - Pnuc_0628 - TRAP dicarboxylate transporter- DctP subunit 625 43.15 0 618793..619281 + 162 145588814 - Pnuc_0629 - tripartite ATP-independent periplasmic transporter DctQ 626 43.68 0 619283..620635 + 450 145588815 - Pnuc_0630 - TRAP dicarboxylate transporter, DctM subunit 627 43.90 0 620660..622183 + 507 145588816 - Pnuc_0631 - malonyl-CoA synthase 628 48.11 +1 622184..623002 - 272 145588817 - Pnuc_0632 - hypothetical protein 629 49.17 +1 623183..623542 - 119 145588818 - Pnuc_0633 - hypothetical protein 630 46.53 0 623517..623804 - 95 145588819 - Pnuc_0634 - hypothetical protein 631 43.66 0 623928..626048 - 706 145588820 - Pnuc_0635 - TonB-dependent receptor, plug 632 46.76 0 626489..627106 + 205 145588821 - Pnuc_0636 - cyclic nucleotide-binding protein 633 45.91 0 627311..629020 + 569 145588822 - Pnuc_0637 - putative oxalyl-CoA decarboxylase 634 45.56 0 629093..630343 + 416 145588823 - Pnuc_0638 - formyl-coenzyme A transferase 635 45.92 0 630445..630873 + 142 145588824 - Pnuc_0639 - putative PAS/PAC sensor protein 636 46.23 0 631001..632248 + 415 145588825 - Pnuc_0640 - formyl-coenzyme A transferase 637 46.41 0 632250..633182 + 310 145588826 - Pnuc_0641 - methionyl-tRNA formyltransferase 638 48.55 +1 633370..633645 - 91 145588827 - Pnuc_0642 - hypothetical protein 639 42.87 0 633860..635002 + 380 145588828 - Pnuc_0643 - choloylglycine hydrolase 640 46.24 0 635108..635959 - 283 145588829 panC Pnuc_0644 - pantoate--beta-alanine ligase 641 46.30 0 635956..636819 - 287 145588830 - Pnuc_0645 - chromosome segregation and condensation protein ScpA 642 47.62 0 636812..637000 - 62 145588831 - Pnuc_0646 - hypothetical protein 643 45.60 0 637105..638775 - 556 145588832 - Pnuc_0647 - methionyl-tRNA synthetase 644 49.46 +1 638919..639749 + 276 145588833 - Pnuc_0648 - formate dehydrogenase, subunit FdhD 645 45.33 0 639802..640368 + 188 145588834 dcd Pnuc_0649 - deoxycytidine triphosphate deaminase 646 47.32 0 640382..641296 + 304 145588835 - Pnuc_0650 - K+ channel inward rectifier domain-containing protein 647 45.68 0 641293..643560 + 755 145588836 - Pnuc_0651 - lysine decarboxylase 648 38.84 -2 643577..643939 + 120 145588837 - Pnuc_0652 - aspartate alpha-decarboxylase 649 47.88 +1 643953..645485 - 510 145588838 - Pnuc_0653 - TRAP dicarboxylate transporter, DctM subunit 650 46.38 0 645482..646033 - 183 145588839 - Pnuc_0654 - tripartite ATP-independent periplasmic transporter DctQ 651 47.36 0 646039..647457 - 472 145588840 - Pnuc_0655 - argininosuccinate lyase 652 48.77 +1 647501..648478 + 325 145588841 - Pnuc_0656 - porphobilinogen deaminase 653 46.30 0 648502..649326 + 274 145588842 - Pnuc_0657 - uroporphyrinogen III synthase HEM4 654 46.53 0 649319..649894 - 191 145588843 - Pnuc_0658 - chorismate lyase 655 50.77 +2 649897..651399 - 500 145588844 - Pnuc_0659 - DEAD/DEAH box helicase domain-containing protein 656 45.96 0 651642..652322 + 226 145588845 - Pnuc_0660 - lysine exporter protein LysE/YggA 657 46.49 0 652341..653738 - 465 145588846 - Pnuc_0661 - aldehyde dehydrogenase 658 44.85 0 653788..654360 + 190 145588847 - Pnuc_0662 - peptide methionine sulfoxide reductase 659 50.16 +1 654373..655008 - 211 145588848 - Pnuc_0663 - pyridoxamine 5'-phosphate oxidase 660 47.95 +1 655031..655810 + 259 145588849 - Pnuc_0664 - UBA/THIF-type NAD/FAD binding protein 661 45.51 0 656046..657425 + 459 145588850 - Pnuc_0665 - amino acid permease-associated region 662 47.45 0 657438..658556 + 372 145588851 - Pnuc_0666 - alanine dehydrogenase 663 47.92 +1 658657..659232 + 191 145588852 - Pnuc_0667 - hypothetical protein 664 45.36 0 659278..661887 + 869 145588853 - Pnuc_0668 - aminopeptidase N 665 45.83 0 661969..662976 + 335 145588854 - Pnuc_0669 - inositol phosphatase/fructose-1,6-bisphosphatase 666 48.04 +1 663065..665635 - 856 145588855 - Pnuc_0670 - cyanophycin synthetase 667 46.83 0 665636..667828 - 730 145588856 - Pnuc_0671 - cyanophycin synthetase 668 47.13 0 668030..670363 + 777 145588857 - Pnuc_0672 - ABC transporter related 669 43.25 0 670360..670833 + 157 145588858 - Pnuc_0673 - hypothetical protein 670 44.34 0 671673..672926 + 417 145588859 - Pnuc_0674 - major facilitator transporter 671 47.17 0 673096..673413 + 105 145588860 - Pnuc_0675 - hypothetical protein 672 43.66 0 673488..675686 + 732 145588861 - Pnuc_0676 - TonB-dependent receptor 673 47.13 0 675686..676939 + 417 145588862 - Pnuc_0677 - BNR repeat-containing glycosyl hydrolase 674 39.20 -2 676936..677412 + 158 145588863 - Pnuc_0678 - redoxin domain-containing protein 675 46.36 0 677444..677896 + 150 145588864 - Pnuc_0679 - hypothetical protein 676 48.38 +1 677955..679649 - 564 145588865 - Pnuc_0680 - dihydroxy-acid dehydratase 677 44.33 0 679946..680509 + 187 145588866 - Pnuc_0681 - response regulator receiver protein 678 44.28 0 680590..681594 + 334 145588867 - Pnuc_0682 - hypothetical protein 679 45.13 0 681625..681963 - 112 145588868 - Pnuc_0683 - nitrogen regulatory protein P-II 680 48.21 +1 682034..683653 - 539 145588869 - Pnuc_0684 - NAD+ synthetase 681 42.09 -1 683691..684227 - 178 145588870 - Pnuc_0685 - inorganic diphosphatase 682 48.03 +1 684400..686460 + 686 145588871 hppA Pnuc_0686 - membrane-bound proton-translocating pyrophosphatase 683 46.15 0 686848..687081 + 77 145588872 - Pnuc_0687 - hypothetical protein 684 37.59 -2 687081..687479 + 132 145588873 - Pnuc_0688 - PilT domain-containing protein 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0