version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 526 46.54 0 518644..519726 + 360 145588715 - Pnuc_0528 - TRAP dicarboxylate transporter- DctP subunit 527 47.33 0 519840..521111 + 423 145588716 - Pnuc_0529 - putative manganese transport protein 528 42.88 0 521137..521922 + 261 145588717 - Pnuc_0530 - hypothetical protein 529 46.70 0 521919..522584 - 221 145588718 - Pnuc_0531 - phospholipase/carboxylesterase 530 43.86 0 522799..523026 + 75 145588719 - Pnuc_0532 - hypothetical protein 531 44.53 0 523027..523401 + 124 145588720 - Pnuc_0533 - hypothetical protein 532 42.72 0 523906..524214 + 102 145588721 - Pnuc_0534 - hypothetical protein 533 45.78 0 524211..525938 + 575 145588722 - Pnuc_0535 - SSS family solute/sodium (Na+) symporter 534 43.84 0 526008..526664 - 218 145588723 - Pnuc_0536 - DNA polymerase III subunit epsilon 535 43.28 0 526661..528490 - 609 145588724 - Pnuc_0537 - CBS domain-containing protein 536 42.11 -1 528595..529392 - 265 145588725 - Pnuc_0538 - hypothetical protein 537 47.10 0 529470..530348 - 292 145588726 - Pnuc_0539 - Citryl-CoA lyase 538 44.64 0 530493..533180 - 895 145588727 - Pnuc_0540 - GCN5-related N-acetyltransferase 539 41.71 -1 533585..534193 + 202 145588728 - Pnuc_0541 - glutathione S-transferase domain-containing protein 540 40.76 -1 534279..534749 + 156 145588729 - Pnuc_0542 - hypothetical protein 541 41.37 -1 534811..535731 + 306 145588730 - Pnuc_0543 - protein tyrosine/serine phosphatase 542 43.65 0 535807..536184 + 125 145588731 - Pnuc_0544 - hypothetical protein 543 43.70 0 536303..537730 + 475 145588732 - Pnuc_0545 - putative cytochrome c1 signal peptide protein 544 44.93 0 537748..538497 + 249 145588733 - Pnuc_0546 - cytochrome c, class I 545 42.64 0 538550..539269 - 239 145588734 - Pnuc_0547 - phytochelatin synthase, putative 546 41.58 -1 539411..539968 + 185 145588735 - Pnuc_0548 - hypothetical protein 547 41.01 -1 540045..540578 + 177 145588736 - Pnuc_0549 - hypothetical protein 548 44.57 0 540684..541982 + 432 145588737 - Pnuc_0550 - secretory lipase 549 47.13 0 542060..542494 - 144 145588738 - Pnuc_0551 - hypothetical protein 550 43.99 0 542685..543998 + 437 145588739 - Pnuc_0552 - Cl- channel, voltage-gated family protein 551 45.18 0 544093..545823 + 576 145588740 - Pnuc_0553 - thiamine pyrophosphate binding domain-containing protein 552 48.29 +1 546274..546594 + 106 145588741 - Pnuc_0554 - hypothetical protein 553 43.14 0 546612..547835 - 407 145588742 - Pnuc_0555 - cytochrome c, class I 554 42.69 0 547934..548371 + 145 145588743 - Pnuc_0556 - DoxX family protein 555 43.46 0 548422..548826 + 134 145588744 - Pnuc_0557 - hypothetical protein 556 39.08 -2 549480..549914 - 144 145588745 - Pnuc_0558 - hypothetical protein 557 45.03 0 550161..550904 + 247 145588746 - Pnuc_0559 - putative transmembrane protein 558 36.62 -2 550908..551120 + 70 145588747 - Pnuc_0560 - hypothetical protein 559 39.95 -1 551164..551541 - 125 145588748 - Pnuc_0561 - hypothetical protein 560 43.50 0 552152..552859 - 235 145588749 - Pnuc_0562 - hypothetical protein 561 39.53 -1 552863..554638 - 591 145588750 - Pnuc_0563 - integral membrane sensor hybrid histidine kinase 562 40.74 -1 554642..555235 - 197 145588751 - Pnuc_0564 - two component LuxR family transcriptional regulator 563 45.07 0 555476..555850 + 124 145588752 - Pnuc_0565 - hypothetical protein 564 40.94 -1 555893..556234 + 113 145588753 - Pnuc_0566 - hypothetical protein 565 42.17 -1 556249..556599 - 116 145588754 - Pnuc_0567 - hypothetical protein 566 42.71 0 556608..558014 - 468 145588755 - Pnuc_0568 - hypothetical protein 567 40.22 -1 558101..559102 - 333 145588756 - Pnuc_0569 - GCN5-related N-acetyltransferase 568 45.82 0 559406..560302 + 298 145588757 - Pnuc_0570 - cation diffusion facilitator family transporter 569 40.66 -1 560317..561189 - 290 145588758 - Pnuc_0571 - beta-lactamase domain-containing protein 570 41.07 -1 561331..561963 - 210 145588759 - Pnuc_0572 - methyltransferase type 11 571 43.57 0 562389..563072 + 227 145588760 - Pnuc_0573 - multiple antibiotic resistance (MarC)-related protein 572 42.01 -1 564209..565303 + 364 145588761 - Pnuc_0575 - choloylglycine hydrolase 573 39.21 -2 565656..566438 + 260 145588762 - Pnuc_0576 - hypothetical protein 574 43.59 0 566657..568294 - 545 145588763 - Pnuc_0578 - amidohydrolase 3 575 42.65 0 568314..569150 - 278 145588764 - Pnuc_0579 - hypothetical protein 576 40.21 -1 569312..569791 + 159 145588765 - Pnuc_0580 - hypothetical protein 577 43.56 0 570029..570331 - 100 145588766 - Pnuc_0581 - hypothetical protein 578 43.65 0 570332..571000 - 222 145588767 - Pnuc_0582 - hypothetical protein 579 47.62 0 571145..571585 + 146 145588768 - Pnuc_0583 - hypothetical protein 580 42.41 0 571594..572166 + 190 145588769 - Pnuc_0584 - ECF subfamily RNA polymerase sigma-24 factor 581 39.37 -2 572144..572458 + 104 145588770 - Pnuc_0585 - hypothetical protein 582 38.73 -2 573052..573255 + 67 145588771 - Pnuc_0586 - cold-shock DNA-binding domain-containing protein 583 40.23 -1 573341..573601 + 86 145588772 - Pnuc_0587 - translation initiation factor IF-1 584 44.99 0 574169..574906 + 245 145588773 - Pnuc_0588 - hypothetical protein 585 43.82 0 574917..575669 + 250 145588774 - Pnuc_0589 - hypothetical protein 586 43.43 0 575942..576139 - 65 145588775 - Pnuc_0590 - hypothetical protein 587 41.23 -1 576142..576660 - 172 145588776 - Pnuc_0591 - hypothetical protein 588 44.85 0 577031..578011 - 326 145588777 - Pnuc_0592 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 589 45.65 0 578094..579035 - 313 145588778 - Pnuc_0593 - 2-keto-3-deoxygluconate permease 590 44.78 0 579331..580230 + 299 145588779 - Pnuc_0594 - 2-hydroxy-3-oxopropionate reductase 591 46.55 0 580610..581956 - 448 145588780 - Pnuc_0595 - N-acetylmuramoyl-L-alanine amidase 592 44.07 0 581960..582490 - 176 145588781 - Pnuc_0596 - hypothetical protein 593 46.76 0 582533..583627 + 364 145588782 - Pnuc_0597 - putative iron-sulfur cluster binding protein 594 47.33 0 583670..584455 + 261 145588783 - Pnuc_0598 - AzlC family protein 595 49.00 +1 584455..584805 + 116 145588784 - Pnuc_0599 - hypothetical protein 596 47.11 0 584847..587924 - 1025 145588785 - Pnuc_0600 - FAD linked oxidase domain-containing protein 597 46.93 0 587921..588604 - 227 145588786 - Pnuc_0601 - GntR family transcriptional regulator 598 47.26 0 588807..589991 + 394 145588787 - Pnuc_0602 - Serine--glyoxylate transaminase 599 45.59 0 590124..590531 + 135 145588788 - Pnuc_0603 - hypothetical protein 600 47.82 +1 590538..591959 + 473 145588789 - Pnuc_0604 - DEAD/DEAH box helicase domain-containing protein 601 48.48 +1 591970..592920 - 316 145588790 - Pnuc_0605 - glutamate--tRNA ligase 602 47.22 0 592924..596538 + 1204 145588791 - Pnuc_0606 - DNA polymerase III, alpha subunit 603 46.43 0 596560..597720 - 386 145588792 - Pnuc_0607 - glycosyl transferase family protein 604 45.12 0 597723..598511 - 262 145588793 - Pnuc_0608 - glycosyl transferase family protein 605 49.87 +1 598508..599269 - 253 145588794 - Pnuc_0609 - glycosyl transferase family protein 606 44.39 0 599280..601043 + 587 145588795 - Pnuc_0610 - lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 607 45.97 0 601068..602531 - 487 145588796 - Pnuc_0611 - ribonuclease 608 48.01 +1 602528..603154 - 208 145588797 - Pnuc_0612 - maf protein 609 50.00 +1 603147..603590 - 147 145588798 - Pnuc_0613 - hypothetical protein 610 46.92 0 603621..604010 - 129 145588799 - Pnuc_0614 - iojap-like protein 611 44.35 0 604058..604747 - 229 145588800 - Pnuc_0615 - nicotinate (nicotinamide) nucleotide adenylyltransferase 612 46.30 0 604744..605676 - 310 145588801 - Pnuc_0616 - coproporphyrinogen III oxidase 613 48.36 +1 605692..606969 - 425 145588802 - Pnuc_0617 - phosphoribosylamine--glycine ligase 614 46.39 0 606999..607718 - 239 145588803 - Pnuc_0618 - hypothetical protein 615 38.75 -2 608060..608872 + 270 145588804 - Pnuc_0619 - hypothetical protein 616 47.03 0 608903..609844 - 313 145588805 - Pnuc_0620 - transcriptional regulator CysB-like protein 617 45.11 0 609908..611062 - 384 145588806 - Pnuc_0621 - permease YjgP/YjgQ family protein 618 45.16 0 611059..612174 - 371 145588807 - Pnuc_0622 - permease YjgP/YjgQ family protein 619 46.06 0 612335..613945 + 536 145588808 - Pnuc_0623 - leucyl aminopeptidase 620 47.01 0 613949..614416 + 155 145588809 - Pnuc_0624 - DNA polymerase III chi subunit, HolC 621 46.69 0 614445..615230 + 261 145588810 - Pnuc_0625 - prolipoprotein diacylglyceryl transferase 622 44.99 0 615242..616150 + 302 145588811 - Pnuc_0626 - LysR family transcriptional regulator 623 45.98 0 616283..617587 + 434 145588812 - Pnuc_0627 - malonyl-CoA decarboxylase 624 43.96 0 617727..618761 + 344 145588813 - Pnuc_0628 - TRAP dicarboxylate transporter- DctP subunit 625 43.15 0 618793..619281 + 162 145588814 - Pnuc_0629 - tripartite ATP-independent periplasmic transporter DctQ 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0