version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 487 44.32 0 478310..480166 + 618 145588676 - Pnuc_0489 - TPR repeat-containing protein 488 48.74 +1 480665..481339 - 224 145588677 - Pnuc_0490 - phosphoglycolate phosphatase 489 45.07 0 481336..482025 - 229 145588678 - Pnuc_0491 - ubiquinone biosynthesis O-methyltransferase 490 47.52 0 482120..482683 - 187 145588679 - Pnuc_0492 - OmpA/MotB domain-containing protein 491 47.69 0 482843..485545 + 900 145588680 - Pnuc_0493 - DNA gyrase subunit A 492 44.54 0 485572..486669 + 365 145588681 - Pnuc_0494 - phosphoserine aminotransferase 493 47.59 0 486669..487748 + 359 145588682 - Pnuc_0495 - chorismate mutase 494 46.04 0 487798..488922 + 374 145588683 - Pnuc_0496 - histidinol-phosphate aminotransferase 495 45.35 0 488942..489823 + 293 145588684 - Pnuc_0497 - prephenate dehydrogenase 496 46.73 0 489823..491151 + 442 145588685 - Pnuc_0498 - 3-phosphoshikimate 1-carboxyvinyltransferase 497 46.30 0 491156..491818 + 220 145588686 - Pnuc_0499 - cytidylate kinase 498 45.70 0 491964..493637 + 557 145588687 rpsA Pnuc_0500 - 30S ribosomal protein S1 499 51.88 +2 493690..494034 + 114 145588688 - Pnuc_0501 - integration host factor, beta subunit 500 47.77 +1 494095..495306 + 403 145588689 - Pnuc_0502 - hypothetical protein 501 44.91 0 495341..496705 + 454 145588690 - Pnuc_0503 - UDP-glucose 6-dehydrogenase 502 47.46 0 496683..497645 + 320 145588691 - Pnuc_0504 - rfaE bifunctional protein 503 43.73 0 497642..498670 + 342 145588692 - Pnuc_0505 - ADP-L-glycero-D-manno-heptose-6-epimerase 504 43.32 0 498679..499419 + 246 145588693 - Pnuc_0506 - hypothetical protein 505 45.45 0 499549..499977 + 142 145588694 - Pnuc_0507 - helix-hairpin-helix DNA-binding motif-containing protein 506 46.27 0 500019..500930 + 303 145588695 - Pnuc_0508 - cysteine synthase B 507 46.26 0 500933..502201 - 422 145588696 - Pnuc_0509 - lytic murein transglycosylase B 508 46.69 0 502286..503206 + 306 145588697 - Pnuc_0510 - histone deacetylase superfamily protein 509 46.14 0 503250..504905 + 551 145588698 - Pnuc_0511 - AMP-dependent synthetase and ligase 510 45.47 0 504987..505736 + 249 145588699 - Pnuc_0512 - electron transfer flavoprotein beta-subunit 511 48.18 +1 505737..506672 + 311 145588700 - Pnuc_0513 - electron transfer flavoprotein, alpha subunit 512 46.36 0 506733..508520 + 595 145588701 - Pnuc_0514 - acyl-CoA dehydrogenase domain-containing protein 513 42.73 0 508564..509010 - 148 145588702 - Pnuc_0515 - putative transmembrane protein 514 45.20 0 509023..509553 - 176 145588703 - Pnuc_0516 - protein of unknown function DUF306, Meta and HslJ 515 46.75 0 509778..510023 + 81 145588704 - Pnuc_0517 - ribosomal protein S16 516 44.09 0 510115..510681 + 188 145588705 - Pnuc_0518 - 16S rRNA processing protein RimM 517 49.13 +1 510699..511445 + 248 145588706 - Pnuc_0519 - tRNA (guanine-N1)-methyltransferase 518 45.64 0 511572..511961 + 129 145588707 - Pnuc_0520 - ribosomal protein L19 519 47.70 0 512025..512762 + 245 145588708 - Pnuc_0521 - NUDIX hydrolase 520 47.19 0 512759..513718 + 319 145588709 - Pnuc_0522 - cobalamin biosynthesis protein CbiB 521 46.15 0 513663..514676 - 337 145588710 - Pnuc_0523 - ribosome small subunit-dependent GTPase A 522 44.58 0 514679..515932 - 417 145588711 - Pnuc_0524 - Ste24 endopeptidase 523 45.24 0 515948..516535 + 195 145588712 - Pnuc_0525 - oligoribonuclease 524 48.40 +1 516591..517214 - 207 145588713 - Pnuc_0526 - molybdenum cofactor synthesis domain-containing protein 525 46.84 0 517241..518587 + 448 145588714 - Pnuc_0527 - peptidase U62, modulator of DNA gyrase 526 46.54 0 518644..519726 + 360 145588715 - Pnuc_0528 - TRAP dicarboxylate transporter- DctP subunit 527 47.33 0 519840..521111 + 423 145588716 - Pnuc_0529 - putative manganese transport protein 528 42.88 0 521137..521922 + 261 145588717 - Pnuc_0530 - hypothetical protein 529 46.70 0 521919..522584 - 221 145588718 - Pnuc_0531 - phospholipase/carboxylesterase 530 43.86 0 522799..523026 + 75 145588719 - Pnuc_0532 - hypothetical protein 531 44.53 0 523027..523401 + 124 145588720 - Pnuc_0533 - hypothetical protein 532 42.72 0 523906..524214 + 102 145588721 - Pnuc_0534 - hypothetical protein 533 45.78 0 524211..525938 + 575 145588722 - Pnuc_0535 - SSS family solute/sodium (Na+) symporter 534 43.84 0 526008..526664 - 218 145588723 - Pnuc_0536 - DNA polymerase III subunit epsilon 535 43.28 0 526661..528490 - 609 145588724 - Pnuc_0537 - CBS domain-containing protein 536 42.11 -1 528595..529392 - 265 145588725 - Pnuc_0538 - hypothetical protein 537 47.10 0 529470..530348 - 292 145588726 - Pnuc_0539 - Citryl-CoA lyase 538 44.64 0 530493..533180 - 895 145588727 - Pnuc_0540 - GCN5-related N-acetyltransferase 539 41.71 -1 533585..534193 + 202 145588728 - Pnuc_0541 - glutathione S-transferase domain-containing protein 540 40.76 -1 534279..534749 + 156 145588729 - Pnuc_0542 - hypothetical protein 541 41.37 -1 534811..535731 + 306 145588730 - Pnuc_0543 - protein tyrosine/serine phosphatase 542 43.65 0 535807..536184 + 125 145588731 - Pnuc_0544 - hypothetical protein 543 43.70 0 536303..537730 + 475 145588732 - Pnuc_0545 - putative cytochrome c1 signal peptide protein 544 44.93 0 537748..538497 + 249 145588733 - Pnuc_0546 - cytochrome c, class I 545 42.64 0 538550..539269 - 239 145588734 - Pnuc_0547 - phytochelatin synthase, putative 546 41.58 -1 539411..539968 + 185 145588735 - Pnuc_0548 - hypothetical protein 547 41.01 -1 540045..540578 + 177 145588736 - Pnuc_0549 - hypothetical protein 548 44.57 0 540684..541982 + 432 145588737 - Pnuc_0550 - secretory lipase 549 47.13 0 542060..542494 - 144 145588738 - Pnuc_0551 - hypothetical protein 550 43.99 0 542685..543998 + 437 145588739 - Pnuc_0552 - Cl- channel, voltage-gated family protein 551 45.18 0 544093..545823 + 576 145588740 - Pnuc_0553 - thiamine pyrophosphate binding domain-containing protein 552 48.29 +1 546274..546594 + 106 145588741 - Pnuc_0554 - hypothetical protein 553 43.14 0 546612..547835 - 407 145588742 - Pnuc_0555 - cytochrome c, class I 554 42.69 0 547934..548371 + 145 145588743 - Pnuc_0556 - DoxX family protein 555 43.46 0 548422..548826 + 134 145588744 - Pnuc_0557 - hypothetical protein 556 39.08 -2 549480..549914 - 144 145588745 - Pnuc_0558 - hypothetical protein 557 45.03 0 550161..550904 + 247 145588746 - Pnuc_0559 - putative transmembrane protein 558 36.62 -2 550908..551120 + 70 145588747 - Pnuc_0560 - hypothetical protein 559 39.95 -1 551164..551541 - 125 145588748 - Pnuc_0561 - hypothetical protein 560 43.50 0 552152..552859 - 235 145588749 - Pnuc_0562 - hypothetical protein 561 39.53 -1 552863..554638 - 591 145588750 - Pnuc_0563 - integral membrane sensor hybrid histidine kinase 562 40.74 -1 554642..555235 - 197 145588751 - Pnuc_0564 - two component LuxR family transcriptional regulator 563 45.07 0 555476..555850 + 124 145588752 - Pnuc_0565 - hypothetical protein 564 40.94 -1 555893..556234 + 113 145588753 - Pnuc_0566 - hypothetical protein 565 42.17 -1 556249..556599 - 116 145588754 - Pnuc_0567 - hypothetical protein 566 42.71 0 556608..558014 - 468 145588755 - Pnuc_0568 - hypothetical protein 567 40.22 -1 558101..559102 - 333 145588756 - Pnuc_0569 - GCN5-related N-acetyltransferase 568 45.82 0 559406..560302 + 298 145588757 - Pnuc_0570 - cation diffusion facilitator family transporter 569 40.66 -1 560317..561189 - 290 145588758 - Pnuc_0571 - beta-lactamase domain-containing protein 570 41.07 -1 561331..561963 - 210 145588759 - Pnuc_0572 - methyltransferase type 11 571 43.57 0 562389..563072 + 227 145588760 - Pnuc_0573 - multiple antibiotic resistance (MarC)-related protein 572 42.01 -1 564209..565303 + 364 145588761 - Pnuc_0575 - choloylglycine hydrolase 573 39.21 -2 565656..566438 + 260 145588762 - Pnuc_0576 - hypothetical protein 574 43.59 0 566657..568294 - 545 145588763 - Pnuc_0578 - amidohydrolase 3 575 42.65 0 568314..569150 - 278 145588764 - Pnuc_0579 - hypothetical protein 576 40.21 -1 569312..569791 + 159 145588765 - Pnuc_0580 - hypothetical protein 577 43.56 0 570029..570331 - 100 145588766 - Pnuc_0581 - hypothetical protein 578 43.65 0 570332..571000 - 222 145588767 - Pnuc_0582 - hypothetical protein 579 47.62 0 571145..571585 + 146 145588768 - Pnuc_0583 - hypothetical protein 580 42.41 0 571594..572166 + 190 145588769 - Pnuc_0584 - ECF subfamily RNA polymerase sigma-24 factor 581 39.37 -2 572144..572458 + 104 145588770 - Pnuc_0585 - hypothetical protein 582 38.73 -2 573052..573255 + 67 145588771 - Pnuc_0586 - cold-shock DNA-binding domain-containing protein 583 40.23 -1 573341..573601 + 86 145588772 - Pnuc_0587 - translation initiation factor IF-1 584 44.99 0 574169..574906 + 245 145588773 - Pnuc_0588 - hypothetical protein 585 43.82 0 574917..575669 + 250 145588774 - Pnuc_0589 - hypothetical protein 586 43.43 0 575942..576139 - 65 145588775 - Pnuc_0590 - hypothetical protein 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.