version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 465 45.16 0 457558..459570 - 670 145588654 - Pnuc_0467 - TRAP transporter, 4TM/12TM fusion protein 466 43.95 0 459660..460610 - 316 145588655 - Pnuc_0468 - TRAP transporter solute receptor TAXI family protein 467 46.17 0 460638..461564 - 308 145588656 - Pnuc_0469 - dihydrodipicolinate synthetase 468 45.91 0 461577..462506 - 309 145588657 - Pnuc_0470 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 469 46.50 0 462592..463533 + 313 145588658 - Pnuc_0471 - 3-hydroxyacyl-CoA dehydrogenase 470 48.01 +1 463554..464759 - 401 145588659 - Pnuc_0472 - major facilitator transporter 471 43.76 0 464803..465483 + 226 145588660 - Pnuc_0473 - cytochrome B561 472 45.47 0 465484..465936 - 150 145588661 - Pnuc_0474 - cytochrome c, class II 473 47.08 0 466007..466726 - 239 145588662 - Pnuc_0475 - peptidase M50 474 44.87 0 467058..467837 + 259 145588663 - Pnuc_0476 - extradiol ring-cleavage dioxygenase III subunit B 475 45.24 0 467849..468226 + 125 145588664 - Pnuc_0477 - CrcB protein 476 44.99 0 468249..469226 - 325 145588665 - Pnuc_0478 - hypothetical protein 477 43.65 0 469242..469784 - 180 145588666 - Pnuc_0479 - chromate transporter 478 48.42 +1 469763..470299 - 178 145588667 - Pnuc_0480 - chromate transporter 479 46.42 0 470317..471294 - 325 145588668 - Pnuc_0481 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 480 47.09 0 471317..472690 - 457 145588669 - Pnuc_0482 - MmgE/PrpD family protein 481 47.96 +1 472738..473742 - 334 145588670 - Pnuc_0483 - hypothetical protein 482 44.57 0 473825..474607 - 260 145588671 - Pnuc_0484 - rhodanese domain-containing protein 483 45.61 0 474684..475685 + 333 145588672 - Pnuc_0485 - hypothetical protein 484 43.84 0 475695..476246 + 183 145588673 - Pnuc_0486 - carboxymuconolactone decarboxylase 485 47.37 0 476254..477108 + 284 145588674 - Pnuc_0487 - pirin domain-containing protein 486 45.73 0 477109..478278 + 389 145588675 - Pnuc_0488 - methyltransferase small 487 44.32 0 478310..480166 + 618 145588676 - Pnuc_0489 - TPR repeat-containing protein 488 48.74 +1 480665..481339 - 224 145588677 - Pnuc_0490 - phosphoglycolate phosphatase 489 45.07 0 481336..482025 - 229 145588678 - Pnuc_0491 - ubiquinone biosynthesis O-methyltransferase 490 47.52 0 482120..482683 - 187 145588679 - Pnuc_0492 - OmpA/MotB domain-containing protein 491 47.69 0 482843..485545 + 900 145588680 - Pnuc_0493 - DNA gyrase subunit A 492 44.54 0 485572..486669 + 365 145588681 - Pnuc_0494 - phosphoserine aminotransferase 493 47.59 0 486669..487748 + 359 145588682 - Pnuc_0495 - chorismate mutase 494 46.04 0 487798..488922 + 374 145588683 - Pnuc_0496 - histidinol-phosphate aminotransferase 495 45.35 0 488942..489823 + 293 145588684 - Pnuc_0497 - prephenate dehydrogenase 496 46.73 0 489823..491151 + 442 145588685 - Pnuc_0498 - 3-phosphoshikimate 1-carboxyvinyltransferase 497 46.30 0 491156..491818 + 220 145588686 - Pnuc_0499 - cytidylate kinase 498 45.70 0 491964..493637 + 557 145588687 rpsA Pnuc_0500 - 30S ribosomal protein S1 499 51.88 +2 493690..494034 + 114 145588688 - Pnuc_0501 - integration host factor, beta subunit 500 47.77 +1 494095..495306 + 403 145588689 - Pnuc_0502 - hypothetical protein 501 44.91 0 495341..496705 + 454 145588690 - Pnuc_0503 - UDP-glucose 6-dehydrogenase 502 47.46 0 496683..497645 + 320 145588691 - Pnuc_0504 - rfaE bifunctional protein 503 43.73 0 497642..498670 + 342 145588692 - Pnuc_0505 - ADP-L-glycero-D-manno-heptose-6-epimerase 504 43.32 0 498679..499419 + 246 145588693 - Pnuc_0506 - hypothetical protein 505 45.45 0 499549..499977 + 142 145588694 - Pnuc_0507 - helix-hairpin-helix DNA-binding motif-containing protein 506 46.27 0 500019..500930 + 303 145588695 - Pnuc_0508 - cysteine synthase B 507 46.26 0 500933..502201 - 422 145588696 - Pnuc_0509 - lytic murein transglycosylase B 508 46.69 0 502286..503206 + 306 145588697 - Pnuc_0510 - histone deacetylase superfamily protein 509 46.14 0 503250..504905 + 551 145588698 - Pnuc_0511 - AMP-dependent synthetase and ligase 510 45.47 0 504987..505736 + 249 145588699 - Pnuc_0512 - electron transfer flavoprotein beta-subunit 511 48.18 +1 505737..506672 + 311 145588700 - Pnuc_0513 - electron transfer flavoprotein, alpha subunit 512 46.36 0 506733..508520 + 595 145588701 - Pnuc_0514 - acyl-CoA dehydrogenase domain-containing protein 513 42.73 0 508564..509010 - 148 145588702 - Pnuc_0515 - putative transmembrane protein 514 45.20 0 509023..509553 - 176 145588703 - Pnuc_0516 - protein of unknown function DUF306, Meta and HslJ 515 46.75 0 509778..510023 + 81 145588704 - Pnuc_0517 - ribosomal protein S16 516 44.09 0 510115..510681 + 188 145588705 - Pnuc_0518 - 16S rRNA processing protein RimM 517 49.13 +1 510699..511445 + 248 145588706 - Pnuc_0519 - tRNA (guanine-N1)-methyltransferase 518 45.64 0 511572..511961 + 129 145588707 - Pnuc_0520 - ribosomal protein L19 519 47.70 0 512025..512762 + 245 145588708 - Pnuc_0521 - NUDIX hydrolase 520 47.19 0 512759..513718 + 319 145588709 - Pnuc_0522 - cobalamin biosynthesis protein CbiB 521 46.15 0 513663..514676 - 337 145588710 - Pnuc_0523 - ribosome small subunit-dependent GTPase A 522 44.58 0 514679..515932 - 417 145588711 - Pnuc_0524 - Ste24 endopeptidase 523 45.24 0 515948..516535 + 195 145588712 - Pnuc_0525 - oligoribonuclease 524 48.40 +1 516591..517214 - 207 145588713 - Pnuc_0526 - molybdenum cofactor synthesis domain-containing protein 525 46.84 0 517241..518587 + 448 145588714 - Pnuc_0527 - peptidase U62, modulator of DNA gyrase 526 46.54 0 518644..519726 + 360 145588715 - Pnuc_0528 - TRAP dicarboxylate transporter- DctP subunit 527 47.33 0 519840..521111 + 423 145588716 - Pnuc_0529 - putative manganese transport protein 528 42.88 0 521137..521922 + 261 145588717 - Pnuc_0530 - hypothetical protein 529 46.70 0 521919..522584 - 221 145588718 - Pnuc_0531 - phospholipase/carboxylesterase 530 43.86 0 522799..523026 + 75 145588719 - Pnuc_0532 - hypothetical protein 531 44.53 0 523027..523401 + 124 145588720 - Pnuc_0533 - hypothetical protein 532 42.72 0 523906..524214 + 102 145588721 - Pnuc_0534 - hypothetical protein 533 45.78 0 524211..525938 + 575 145588722 - Pnuc_0535 - SSS family solute/sodium (Na+) symporter 534 43.84 0 526008..526664 - 218 145588723 - Pnuc_0536 - DNA polymerase III subunit epsilon 535 43.28 0 526661..528490 - 609 145588724 - Pnuc_0537 - CBS domain-containing protein 536 42.11 -1 528595..529392 - 265 145588725 - Pnuc_0538 - hypothetical protein 537 47.10 0 529470..530348 - 292 145588726 - Pnuc_0539 - Citryl-CoA lyase 538 44.64 0 530493..533180 - 895 145588727 - Pnuc_0540 - GCN5-related N-acetyltransferase 539 41.71 -1 533585..534193 + 202 145588728 - Pnuc_0541 - glutathione S-transferase domain-containing protein 540 40.76 -1 534279..534749 + 156 145588729 - Pnuc_0542 - hypothetical protein 541 41.37 -1 534811..535731 + 306 145588730 - Pnuc_0543 - protein tyrosine/serine phosphatase 542 43.65 0 535807..536184 + 125 145588731 - Pnuc_0544 - hypothetical protein 543 43.70 0 536303..537730 + 475 145588732 - Pnuc_0545 - putative cytochrome c1 signal peptide protein 544 44.93 0 537748..538497 + 249 145588733 - Pnuc_0546 - cytochrome c, class I 545 42.64 0 538550..539269 - 239 145588734 - Pnuc_0547 - phytochelatin synthase, putative 546 41.58 -1 539411..539968 + 185 145588735 - Pnuc_0548 - hypothetical protein 547 41.01 -1 540045..540578 + 177 145588736 - Pnuc_0549 - hypothetical protein 548 44.57 0 540684..541982 + 432 145588737 - Pnuc_0550 - secretory lipase 549 47.13 0 542060..542494 - 144 145588738 - Pnuc_0551 - hypothetical protein 550 43.99 0 542685..543998 + 437 145588739 - Pnuc_0552 - Cl- channel, voltage-gated family protein 551 45.18 0 544093..545823 + 576 145588740 - Pnuc_0553 - thiamine pyrophosphate binding domain-containing protein 552 48.29 +1 546274..546594 + 106 145588741 - Pnuc_0554 - hypothetical protein 553 43.14 0 546612..547835 - 407 145588742 - Pnuc_0555 - cytochrome c, class I 554 42.69 0 547934..548371 + 145 145588743 - Pnuc_0556 - DoxX family protein 555 43.46 0 548422..548826 + 134 145588744 - Pnuc_0557 - hypothetical protein 556 39.08 -2 549480..549914 - 144 145588745 - Pnuc_0558 - hypothetical protein 557 45.03 0 550161..550904 + 247 145588746 - Pnuc_0559 - putative transmembrane protein 558 36.62 -2 550908..551120 + 70 145588747 - Pnuc_0560 - hypothetical protein 559 39.95 -1 551164..551541 - 125 145588748 - Pnuc_0561 - hypothetical protein 560 43.50 0 552152..552859 - 235 145588749 - Pnuc_0562 - hypothetical protein 561 39.53 -1 552863..554638 - 591 145588750 - Pnuc_0563 - integral membrane sensor hybrid histidine kinase 562 40.74 -1 554642..555235 - 197 145588751 - Pnuc_0564 - two component LuxR family transcriptional regulator 563 45.07 0 555476..555850 + 124 145588752 - Pnuc_0565 - hypothetical protein 564 40.94 -1 555893..556234 + 113 145588753 - Pnuc_0566 - hypothetical protein 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0