version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 359 47.54 0 356314..357228 - 304 145588548 - Pnuc_0361 - hypothetical protein 360 46.50 0 357378..357620 + 80 145588549 - Pnuc_0362 - hypothetical protein 361 47.95 +1 357612..358658 - 348 145588550 - Pnuc_0363 - DNA/RNA non-specific endonuclease 362 47.10 0 359153..360118 + 321 145588551 - Pnuc_0364 - lytic transglycosylase, catalytic 363 47.70 0 360186..360533 - 115 145588552 - Pnuc_0365 - peptidylprolyl isomerase, FKBP-type 364 45.77 0 360802..363036 + 744 145588553 - Pnuc_0366 - isocitrate dehydrogenase, NADP-dependent 365 48.04 +1 363138..363545 + 135 145588554 - Pnuc_0367 - BLUF domain-containing protein 366 43.61 0 363600..364562 + 320 145588555 - Pnuc_0368 - putative sulfite oxidase subunit YedY 367 44.86 0 364566..365120 + 184 145588556 - Pnuc_0369 - Lipocalin family protein 368 47.55 0 365117..366706 - 529 145588557 - Pnuc_0370 - vinylacetyl-CoA Delta-isomerase 369 44.44 0 366791..367474 + 227 145588558 - Pnuc_0371 - TetR family transcriptional regulator 370 42.70 0 367488..368042 + 184 145588559 - Pnuc_0372 - isochorismatase hydrolase 371 46.95 0 368072..368842 + 256 145588560 - Pnuc_0373 - short-chain dehydrogenase/reductase SDR 372 47.36 0 368839..369387 - 182 145588561 - Pnuc_0374 - hypothetical protein 373 46.14 0 369474..370199 + 241 145588562 - Pnuc_0375 - pseudouridine synthase 374 36.54 -2 370207..370518 + 103 145588563 - Pnuc_0376 - transcriptional coactivator/pterin dehydratase 375 46.03 0 370870..371184 + 104 145588564 - Pnuc_0377 - hypothetical protein 376 45.19 0 371191..371814 - 207 145588565 - Pnuc_0378 - hypothetical protein 377 43.81 0 371910..372749 + 279 145588566 - Pnuc_0379 - PpiC-type peptidyl-prolyl cis-trans isomerase 378 46.63 0 372826..373314 - 162 145588567 - Pnuc_0380 - dihydrofolate reductase 379 44.28 0 373325..374119 - 264 145588568 - Pnuc_0381 - thymidylate synthase 380 44.99 0 374155..375201 - 348 145588569 - Pnuc_0382 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 381 45.06 0 375246..375569 - 107 145588570 - Pnuc_0383 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 382 44.54 0 375667..376683 + 338 145588571 - Pnuc_0384 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 383 44.90 0 376719..377012 - 97 145588572 - Pnuc_0385 - hypothetical protein 384 47.34 0 377025..378338 - 437 145588573 - Pnuc_0386 - molybdenum cofactor synthesis domain-containing protein 385 45.33 0 378335..378934 - 199 145588574 - Pnuc_0387 - molybdopterin-guanine dinucleotide biosynthesis protein A 386 45.70 0 378934..380049 - 371 145588575 moaA Pnuc_0388 - molybdenum cofactor biosynthesis protein A 387 48.79 +1 380133..382772 - 879 145588576 - Pnuc_0389 - ribonuclease 388 49.80 +1 383238..384257 + 339 145588577 - Pnuc_0390 - RluA family pseudouridine synthase 389 45.51 0 384254..384943 + 229 145588578 - Pnuc_0391 - HAD family hydrolase 390 46.62 0 384990..385937 + 315 145588579 - Pnuc_0392 - peptidase S49 391 47.47 0 385969..386739 - 256 145588580 - Pnuc_0393 - uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase 392 47.85 +1 386762..387367 - 201 145588581 - Pnuc_0394 - maf protein 393 47.74 +1 387410..387985 + 191 145588582 - Pnuc_0395 - hypothetical protein 394 47.22 0 388091..388270 + 59 145588583 - Pnuc_0396 - ribosomal protein L32 395 46.65 0 388354..389367 + 337 145588584 - Pnuc_0397 - fatty acid/phospholipid synthesis protein PlsX 396 47.21 0 389364..390350 + 328 145588585 - Pnuc_0398 - 3-oxoacyl-(acyl-carrier-protein) synthase III 397 47.86 +1 390393..391328 + 311 145588586 - Pnuc_0399 - malonyl CoA-acyl carrier protein transacylase 398 49.33 +1 391368..392111 + 247 145588587 - Pnuc_0400 - 3-oxoacyl-(acyl-carrier-protein) reductase 399 45.42 0 392212..392451 + 79 145588588 - Pnuc_0401 - acyl carrier protein 400 48.80 +1 392473..393720 + 415 145588589 - Pnuc_0402 - 3-oxoacyl-(acyl carrier protein) synthase II 401 48.90 +1 393768..395219 + 483 145588590 - Pnuc_0403 - protease Do 402 45.24 0 395366..397171 + 601 145588591 - Pnuc_0404 - GTP-binding protein LepA 403 45.35 0 397171..397977 + 268 145588592 - Pnuc_0405 - signal peptidase I 404 47.35 0 397982..398773 + 263 145588593 rnc Pnuc_0406 - ribonuclease III 405 45.73 0 398776..399711 + 311 145588594 - Pnuc_0407 - GTP-binding protein Era 406 45.17 0 399718..400452 + 244 145588595 recO Pnuc_0408 - DNA repair protein RecO 407 45.38 0 400465..401211 + 248 145588596 - Pnuc_0409 - pyridoxal phosphate biosynthetic protein PdxJ 408 46.06 0 401208..401600 + 130 145588597 - Pnuc_0410 - holo-acyl-carrier-protein synthase 409 47.02 0 401635..402708 + 357 145588598 - Pnuc_0411 - glycoside hydrolase family 3 protein 410 44.04 0 402737..403474 + 245 145588599 - Pnuc_0412 - carbonate dehydratase 411 44.03 0 403561..404121 - 186 145588600 - Pnuc_0413 - translation elongation factor P 412 45.47 0 404209..405279 - 356 145588601 - Pnuc_0414 - hypothetical protein 413 46.59 0 405332..407194 + 620 145588602 - Pnuc_0415 - excinuclease ABC, C subunit 414 43.06 0 407229..407804 + 191 145588603 - Pnuc_0416 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 415 45.24 0 408206..408667 + 153 145588604 - Pnuc_0417 - hypothetical protein 416 44.17 0 408733..409452 - 239 145588605 - Pnuc_0418 - SOS-response transcriptional repressor, LexA 417 50.05 +1 409512..410588 + 358 145588606 - Pnuc_0419 - asparaginase/glutaminase 418 46.67 0 410724..411098 + 124 145588607 rpsF Pnuc_0420 - 30S ribosomal protein S6 419 43.20 0 411159..411452 + 97 145588608 - Pnuc_0421 - putative primosomal replication protein N, PriB 420 42.12 -1 411466..411738 + 90 145588609 - Pnuc_0422 - ribosomal protein S18 421 45.47 0 411752..412204 + 150 145588610 - Pnuc_0423 - ribosomal protein L9 422 46.71 0 412229..414724 + 831 145588611 - Pnuc_0424 - DnaB domain-containing protein 423 43.07 0 414823..415089 - 88 145588612 - Pnuc_0425 - hypothetical protein 424 42.46 0 415164..415985 - 273 145588613 - Pnuc_0426 - MscS mechanosensitive ion channel 425 48.13 +1 416011..416544 - 177 145588614 - Pnuc_0427 - NLP/P60 protein 426 46.69 0 416525..418171 - 548 145588615 - Pnuc_0428 - PhoH family protein 427 45.94 0 418404..418871 - 155 145588616 - Pnuc_0429 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 428 49.56 +1 418904..419821 - 305 145588617 - Pnuc_0430 - polysaccharide deacetylase 429 43.27 0 419834..420880 - 348 145588618 - Pnuc_0431 - hypothetical protein 430 48.16 +1 420916..421785 - 289 145588619 - Pnuc_0432 - hypothetical protein 431 44.76 0 421786..422748 - 320 145588620 - Pnuc_0433 - glycosyl transferase family protein 432 46.34 0 422790..423950 - 386 145588621 - Pnuc_0434 - DegT/DnrJ/EryC1/StrS aminotransferase 433 46.08 0 423960..425654 - 564 145588622 - Pnuc_0435 - glycosyl transferase family protein 434 50.00 +1 425654..426031 - 125 145588623 - Pnuc_0436 - hypothetical protein 435 45.35 0 426111..427367 + 418 145588624 - Pnuc_0437 - aminotransferase AlaT 436 47.29 0 427364..428674 + 436 145588625 - Pnuc_0438 - homoserine dehydrogenase 437 45.95 0 428683..430125 + 480 145588626 - Pnuc_0439 - threonine synthase 438 49.19 +1 430157..431398 + 413 145588627 - Pnuc_0440 - molybdenum cofactor synthesis domain-containing protein 439 47.29 0 431417..431674 + 85 145588628 - Pnuc_0441 - molybdopterin converting factor, subunit 1 440 47.10 0 431676..432140 + 154 145588629 - Pnuc_0442 - molybdopterin biosynthesis protein MoaE 441 44.24 0 432172..433830 + 552 145588630 - Pnuc_0443 - carboxylesterase, type B 442 45.55 0 434063..435331 + 422 145588631 - Pnuc_0444 - major facilitator transporter 443 48.72 +1 435404..437002 - 532 145588632 - Pnuc_0445 - gamma-glutamyltransferase 444 50.62 +2 437122..437364 - 80 145588633 - Pnuc_0446 - excinuclease ABC subunit C 445 46.58 0 437468..440071 + 867 145588634 - Pnuc_0447 - ATPase 446 47.49 0 440117..440872 + 251 145588635 - Pnuc_0448 - hypothetical protein 447 44.31 0 440883..441866 - 327 145588636 - Pnuc_0449 - hypothetical protein 448 44.85 0 441951..443183 + 410 145588637 - Pnuc_0450 - major facilitator transporter 449 46.51 0 443192..445627 + 811 145588638 - Pnuc_0451 - heavy metal translocating P-type ATPase 450 43.50 0 445637..445813 + 58 145588639 - Pnuc_0452 - cytochrome oxidase maturation protein, cbb3-type 451 44.28 0 445984..447426 + 480 145588640 - Pnuc_0453 - cytochrome c oxidase, cbb3-type, subunit I 452 46.08 0 447437..448087 + 216 145588641 - Pnuc_0454 - cytochrome c oxidase, cbb3-type, subunit II 453 40.32 -1 448087..448272 + 61 145588642 - Pnuc_0455 - hypothetical protein 454 44.30 0 448269..449207 + 312 145588643 - Pnuc_0456 - cytochrome c oxidase, cbb3-type, subunit III 455 44.72 0 449211..450668 + 485 145588644 - Pnuc_0457 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 456 41.10 -1 450684..450902 + 72 145588645 - Pnuc_0458 - hypothetical protein 457 42.91 0 450899..451159 + 86 145588646 - Pnuc_0459 - putative transmembrane protein 458 45.40 0 451156..451926 - 256 145588647 - Pnuc_0460 - CRP/FNR family transcriptional regulator 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0