version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 321 31.92 -2 316681..318021 + 446 145588510 - Pnuc_0322 - hypothetical protein 322 38.11 -2 318052..318993 + 313 145588511 - Pnuc_0323 - phytanoyl-CoA dioxygenase 323 35.59 -2 319022..319996 + 324 145588512 - Pnuc_0324 - NAD-dependent epimerase/dehydratase 324 40.79 -1 320007..321293 + 428 145588513 - Pnuc_0325 - hypothetical protein 325 35.32 -2 321290..321691 + 133 145588514 - Pnuc_0326 - hypothetical protein 326 41.47 -1 321841..322590 - 249 145588515 - Pnuc_0327 - short-chain dehydrogenase/reductase SDR 327 43.86 0 322592..323893 - 433 145588516 - Pnuc_0328 - FAD linked oxidase domain-containing protein 328 42.37 0 324082..324966 + 294 145588517 - Pnuc_0329 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 329 42.32 0 324963..325385 + 140 145588518 - Pnuc_0330 - acid phosphatase/vanadium-dependent haloperoxidase related 330 36.84 -2 325374..326543 - 389 145588519 - Pnuc_0331 - hypothetical protein 331 38.55 -2 326564..328021 - 485 145588520 - Pnuc_0332 - hypothetical protein 332 42.52 0 328785..329372 - 195 145588521 - Pnuc_0334 - adenylyl-sulfate kinase 333 45.00 0 329767..331197 + 476 145588522 - Pnuc_0335 - glycosyl transferase family protein 334 40.64 -1 331297..332829 - 510 145588523 - Pnuc_0336 - hypothetical protein 335 43.51 0 332901..334973 + 690 145588524 - Pnuc_0337 - acyltransferase 3 336 43.59 0 335020..335916 + 298 145588525 - Pnuc_0338 - hypothetical protein 337 44.28 0 336004..337035 - 343 145588526 - Pnuc_0339 - sodium/calcium exchanger membrane region 338 47.54 0 337121..337486 + 121 145588527 - Pnuc_0340 - cobalamin (vitamin B12) biosynthesis CbiX protein 339 40.94 -1 337549..337890 + 113 145588528 - Pnuc_0341 - hypothetical protein 340 42.67 0 337887..338261 + 124 145588529 - Pnuc_0342 - hypothetical protein 341 49.39 +1 338272..339093 - 273 145588530 - Pnuc_0343 - uroporphyrin-III C-methyltransferase 342 46.10 0 339115..339717 - 200 145588531 - Pnuc_0344 - hypothetical protein 343 45.94 0 339714..341426 - 570 145588532 - Pnuc_0345 - nitrite/sulfite reductase hemoprotein beta subunit 344 45.77 0 341589..341966 + 125 145588533 - Pnuc_0346 - XRE family transcriptional regulator 345 43.35 0 342028..342636 + 202 145588534 - Pnuc_0347 - hypothetical protein 346 39.71 -1 343165..343509 - 114 145588535 - Pnuc_0348 - death-on-curing family protein 347 40.05 -1 343853..344224 - 123 145588536 - Pnuc_0349 - hypothetical protein 348 42.83 0 344667..345245 + 192 145588537 - Pnuc_0350 - hypothetical protein 349 43.80 0 345477..346565 + 362 145588538 - Pnuc_0351 - acyltransferase 3 350 44.51 0 346587..347114 - 175 145588539 - Pnuc_0352 - hypothetical protein 351 47.35 0 347229..348848 + 539 145588540 - Pnuc_0353 - choline dehydrogenase 352 48.27 +1 348841..349764 + 307 145588541 - Pnuc_0354 - hypothetical protein 353 44.39 0 349908..351092 + 394 145588542 - Pnuc_0355 - extracellular ligand-binding receptor 354 44.71 0 351239..352117 + 292 145588543 - Pnuc_0356 - inner-membrane translocator 355 45.65 0 352117..354048 + 643 145588544 - Pnuc_0357 - ABC transporter related 356 46.36 0 354080..354808 + 242 145588545 - Pnuc_0358 - ABC transporter related 357 41.07 -1 354880..355383 - 167 145588546 - Pnuc_0359 - hypothetical protein 358 50.20 +1 355443..356207 - 254 145588547 - Pnuc_0360 - hypothetical protein 359 47.54 0 356314..357228 - 304 145588548 - Pnuc_0361 - hypothetical protein 360 46.50 0 357378..357620 + 80 145588549 - Pnuc_0362 - hypothetical protein 361 47.95 +1 357612..358658 - 348 145588550 - Pnuc_0363 - DNA/RNA non-specific endonuclease 362 47.10 0 359153..360118 + 321 145588551 - Pnuc_0364 - lytic transglycosylase, catalytic 363 47.70 0 360186..360533 - 115 145588552 - Pnuc_0365 - peptidylprolyl isomerase, FKBP-type 364 45.77 0 360802..363036 + 744 145588553 - Pnuc_0366 - isocitrate dehydrogenase, NADP-dependent 365 48.04 +1 363138..363545 + 135 145588554 - Pnuc_0367 - BLUF domain-containing protein 366 43.61 0 363600..364562 + 320 145588555 - Pnuc_0368 - putative sulfite oxidase subunit YedY 367 44.86 0 364566..365120 + 184 145588556 - Pnuc_0369 - Lipocalin family protein 368 47.55 0 365117..366706 - 529 145588557 - Pnuc_0370 - vinylacetyl-CoA Delta-isomerase 369 44.44 0 366791..367474 + 227 145588558 - Pnuc_0371 - TetR family transcriptional regulator 370 42.70 0 367488..368042 + 184 145588559 - Pnuc_0372 - isochorismatase hydrolase 371 46.95 0 368072..368842 + 256 145588560 - Pnuc_0373 - short-chain dehydrogenase/reductase SDR 372 47.36 0 368839..369387 - 182 145588561 - Pnuc_0374 - hypothetical protein 373 46.14 0 369474..370199 + 241 145588562 - Pnuc_0375 - pseudouridine synthase 374 36.54 -2 370207..370518 + 103 145588563 - Pnuc_0376 - transcriptional coactivator/pterin dehydratase 375 46.03 0 370870..371184 + 104 145588564 - Pnuc_0377 - hypothetical protein 376 45.19 0 371191..371814 - 207 145588565 - Pnuc_0378 - hypothetical protein 377 43.81 0 371910..372749 + 279 145588566 - Pnuc_0379 - PpiC-type peptidyl-prolyl cis-trans isomerase 378 46.63 0 372826..373314 - 162 145588567 - Pnuc_0380 - dihydrofolate reductase 379 44.28 0 373325..374119 - 264 145588568 - Pnuc_0381 - thymidylate synthase 380 44.99 0 374155..375201 - 348 145588569 - Pnuc_0382 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 381 45.06 0 375246..375569 - 107 145588570 - Pnuc_0383 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 382 44.54 0 375667..376683 + 338 145588571 - Pnuc_0384 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 383 44.90 0 376719..377012 - 97 145588572 - Pnuc_0385 - hypothetical protein 384 47.34 0 377025..378338 - 437 145588573 - Pnuc_0386 - molybdenum cofactor synthesis domain-containing protein 385 45.33 0 378335..378934 - 199 145588574 - Pnuc_0387 - molybdopterin-guanine dinucleotide biosynthesis protein A 386 45.70 0 378934..380049 - 371 145588575 moaA Pnuc_0388 - molybdenum cofactor biosynthesis protein A 387 48.79 +1 380133..382772 - 879 145588576 - Pnuc_0389 - ribonuclease 388 49.80 +1 383238..384257 + 339 145588577 - Pnuc_0390 - RluA family pseudouridine synthase 389 45.51 0 384254..384943 + 229 145588578 - Pnuc_0391 - HAD family hydrolase 390 46.62 0 384990..385937 + 315 145588579 - Pnuc_0392 - peptidase S49 391 47.47 0 385969..386739 - 256 145588580 - Pnuc_0393 - uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase 392 47.85 +1 386762..387367 - 201 145588581 - Pnuc_0394 - maf protein 393 47.74 +1 387410..387985 + 191 145588582 - Pnuc_0395 - hypothetical protein 394 47.22 0 388091..388270 + 59 145588583 - Pnuc_0396 - ribosomal protein L32 395 46.65 0 388354..389367 + 337 145588584 - Pnuc_0397 - fatty acid/phospholipid synthesis protein PlsX 396 47.21 0 389364..390350 + 328 145588585 - Pnuc_0398 - 3-oxoacyl-(acyl-carrier-protein) synthase III 397 47.86 +1 390393..391328 + 311 145588586 - Pnuc_0399 - malonyl CoA-acyl carrier protein transacylase 398 49.33 +1 391368..392111 + 247 145588587 - Pnuc_0400 - 3-oxoacyl-(acyl-carrier-protein) reductase 399 45.42 0 392212..392451 + 79 145588588 - Pnuc_0401 - acyl carrier protein 400 48.80 +1 392473..393720 + 415 145588589 - Pnuc_0402 - 3-oxoacyl-(acyl carrier protein) synthase II 401 48.90 +1 393768..395219 + 483 145588590 - Pnuc_0403 - protease Do 402 45.24 0 395366..397171 + 601 145588591 - Pnuc_0404 - GTP-binding protein LepA 403 45.35 0 397171..397977 + 268 145588592 - Pnuc_0405 - signal peptidase I 404 47.35 0 397982..398773 + 263 145588593 rnc Pnuc_0406 - ribonuclease III 405 45.73 0 398776..399711 + 311 145588594 - Pnuc_0407 - GTP-binding protein Era 406 45.17 0 399718..400452 + 244 145588595 recO Pnuc_0408 - DNA repair protein RecO 407 45.38 0 400465..401211 + 248 145588596 - Pnuc_0409 - pyridoxal phosphate biosynthetic protein PdxJ 408 46.06 0 401208..401600 + 130 145588597 - Pnuc_0410 - holo-acyl-carrier-protein synthase 409 47.02 0 401635..402708 + 357 145588598 - Pnuc_0411 - glycoside hydrolase family 3 protein 410 44.04 0 402737..403474 + 245 145588599 - Pnuc_0412 - carbonate dehydratase 411 44.03 0 403561..404121 - 186 145588600 - Pnuc_0413 - translation elongation factor P 412 45.47 0 404209..405279 - 356 145588601 - Pnuc_0414 - hypothetical protein 413 46.59 0 405332..407194 + 620 145588602 - Pnuc_0415 - excinuclease ABC, C subunit 414 43.06 0 407229..407804 + 191 145588603 - Pnuc_0416 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 415 45.24 0 408206..408667 + 153 145588604 - Pnuc_0417 - hypothetical protein 416 44.17 0 408733..409452 - 239 145588605 - Pnuc_0418 - SOS-response transcriptional repressor, LexA 417 50.05 +1 409512..410588 + 358 145588606 - Pnuc_0419 - asparaginase/glutaminase 418 46.67 0 410724..411098 + 124 145588607 rpsF Pnuc_0420 - 30S ribosomal protein S6 419 43.20 0 411159..411452 + 97 145588608 - Pnuc_0421 - putative primosomal replication protein N, PriB 420 42.12 -1 411466..411738 + 90 145588609 - Pnuc_0422 - ribosomal protein S18 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0