version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 202 43.95 0 199139..199816 + 225 145588391 - Pnuc_0203 - N-acetyl-anhydromuranmyl-L-alanine amidase 203 47.42 0 200089..203070 + 993 145588392 - Pnuc_0204 - ribonucleotide-diphosphate reductase subunit alpha 204 44.30 0 203116..204300 + 394 145588393 - Pnuc_0205 - ribonucleotide-diphosphate reductase subunit beta 205 41.59 -1 204635..204949 + 104 145588394 - Pnuc_0206 - hypothetical protein 206 47.19 0 205130..206089 - 319 145588395 - Pnuc_0207 - ribokinase-like domain-containing protein 207 45.83 0 206134..207654 - 506 145588396 - Pnuc_0208 - ribosomal protein L11 methyltransferase 208 47.69 0 207671..209035 - 454 145588397 - Pnuc_0209 - acetyl-CoA carboxylase, biotin carboxylase 209 46.24 0 209083..209547 - 154 145588398 - Pnuc_0210 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 210 46.22 0 209584..210033 - 149 145588399 - Pnuc_0211 - 3-dehydroquinate dehydratase, type II 211 44.70 0 210282..210809 - 175 145588400 - Pnuc_0212 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 212 46.57 0 210836..212233 + 465 145588401 - Pnuc_0213 - UDP-N-acetylmuramate 213 46.34 0 212253..212990 + 245 145588402 - Pnuc_0214 - short-chain dehydrogenase/reductase SDR 214 47.46 0 212993..215023 + 676 145588403 - Pnuc_0215 - ribonuclease II 215 47.86 +1 215007..215894 + 295 145588404 - Pnuc_0216 - TonB family protein 216 47.35 0 215943..216848 + 301 145588405 - Pnuc_0217 - shikimate 5-dehydrogenase 217 44.04 0 216857..217594 + 245 145588406 - Pnuc_0218 - monofunctional biosynthetic peptidoglycan transglycosylase 218 49.88 +1 217598..218443 - 281 145588407 pyrF Pnuc_0219 - orotidine 5'-phosphate decarboxylase 219 44.41 0 218517..219482 + 321 145588408 - Pnuc_0220 - magnesium and cobalt transport protein CorA 220 52.12 +2 219484..219978 - 164 145588409 - Pnuc_0221 - CinA domain-containing protein 221 47.12 0 219975..220547 - 190 145588410 - Pnuc_0222 - phosphatidylglycerophosphatase A 222 45.69 0 220544..221563 - 339 145588411 - Pnuc_0223 - thiamine-monophosphate kinase 223 45.56 0 221648..223969 + 773 145588412 - Pnuc_0224 - malic enzyme 224 45.57 0 224098..224718 + 206 145588413 - Pnuc_0225 - hypothetical protein 225 50.39 +1 224748..225509 - 253 145588414 - Pnuc_0226 - hypothetical protein 226 45.69 0 225575..227548 + 657 145588415 - Pnuc_0227 - transketolase 227 45.58 0 227574..228602 + 342 145588416 - Pnuc_0228 - glyceraldehyde-3-phosphate dehydrogenase, type I 228 45.18 0 228696..229151 - 151 145588417 - Pnuc_0229 - ferric uptake regulator family protein 229 44.80 0 229195..229944 + 249 145588418 - Pnuc_0230 - SmpA/OmlA domain-containing protein 230 44.78 0 230009..230812 + 267 145588419 - Pnuc_0231 - dihydrodipicolinate reductase 231 46.32 0 230862..233534 + 890 145588420 - Pnuc_0232 - leucyl-tRNA synthetase 232 45.45 0 233553..234080 + 175 145588421 - Pnuc_0233 - rare lipoprotein B precursor 233 46.89 0 234096..235157 + 353 145588422 - Pnuc_0234 - DNA polymerase III, delta subunit 234 45.81 0 235204..236493 + 429 145588423 - Pnuc_0235 - gamma-glutamyl phosphate reductase 235 42.02 -1 236537..236962 + 141 145588424 - Pnuc_0236 - hypothetical protein 236 46.36 0 237009..238466 + 485 145588425 - Pnuc_0237 - putative RNA methylase 237 46.78 0 238523..238693 + 56 145588426 - Pnuc_0238 - rubredoxin-type Fe(Cys)4 protein 238 44.67 0 238706..240010 + 434 145588427 - Pnuc_0239 - glutamate-1-semialdehyde-2,1-aminomutase 239 45.48 0 240027..240866 - 279 145588428 apaH Pnuc_0240 - diadenosine tetraphosphatase 240 44.96 0 240900..242378 - 492 145588429 - Pnuc_0241 - deoxyribodipyrimidine photo-lyase 241 42.25 -1 242455..243273 + 272 145588430 - Pnuc_0242 - hypothetical protein 242 44.55 0 243296..243928 + 210 145588431 - Pnuc_0243 - hypothetical protein 243 47.00 0 243921..244337 + 138 145588432 - Pnuc_0244 - Holliday junction resolvase YqgF 244 44.44 0 244354..244857 + 167 145588433 - Pnuc_0245 - phosphoribosyltransferase 245 44.75 0 244854..245834 + 326 145588434 - Pnuc_0246 - aspartate carbamoyltransferase 246 45.20 0 245868..247199 + 443 145588435 - Pnuc_0247 - hypothetical protein 247 41.23 -1 247205..248116 + 303 145588436 - Pnuc_0248 - hypothetical protein 248 42.78 0 248117..248836 + 239 145588437 - Pnuc_0249 - glycosyl transferase family protein 249 38.24 -2 248848..249906 - 352 145588438 - Pnuc_0250 - hypothetical protein 250 44.34 0 249910..250854 - 314 145588439 - Pnuc_0251 - hypothetical protein 251 38.02 -2 250877..251644 + 255 145588440 - Pnuc_0252 - hypothetical protein 252 44.00 0 251688..252746 + 352 145588441 - Pnuc_0253 - dTDP-glucose 4,6-dehydratase 253 45.83 0 252748..253707 + 319 145588442 - Pnuc_0254 - dTDP-4-dehydrorhamnose reductase 254 44.30 0 253734..254663 + 309 145588443 - Pnuc_0255 - glucose-1-phosphate thymidylyltransferase 255 43.42 0 254660..255214 + 184 145588444 - Pnuc_0256 - dTDP-4-dehydrorhamnose 3,5-epimerase 256 45.29 0 255216..256244 + 342 145588445 - Pnuc_0257 - lipopolysaccharide heptosyltransferase I 257 46.98 0 256267..257886 - 539 145588446 - Pnuc_0258 - TolC family type I secretion outer membrane protein 258 44.19 0 257938..258849 + 303 145588447 - Pnuc_0259 - putative undecaprenol kinase 259 42.92 0 258885..259343 + 152 145588448 - Pnuc_0260 - hypothetical protein 260 46.15 0 259368..260303 + 311 145588449 - Pnuc_0261 - NAD-dependent epimerase/dehydratase 261 46.20 0 260305..261120 + 271 145588450 - Pnuc_0262 - tRNA (guanine-N(7)-)-methyltransferase 262 46.71 0 261149..262621 - 490 145588451 - Pnuc_0263 - succinic semialdehyde dehydrogenase 263 48.95 +1 262776..263300 - 174 145588452 - Pnuc_0264 - NusB antitermination factor 264 45.22 0 263305..263817 - 170 145588453 - Pnuc_0265 - riboflavin synthase 265 49.13 +1 263847..264992 - 381 145588454 - Pnuc_0266 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 266 44.30 0 265276..265968 + 230 145588455 - Pnuc_0267 - hypothetical protein 267 36.36 -2 265965..266294 + 109 145588456 - Pnuc_0268 - hypothetical protein 268 48.63 +1 266344..266853 + 169 145588457 - Pnuc_0269 - hypothetical protein 269 48.21 +1 266870..267985 + 371 145588458 - Pnuc_0270 - riboflavin biosynthesis protein RibD 270 45.63 0 267995..268612 + 205 145588459 - Pnuc_0271 - riboflavin synthase subunit alpha 271 45.61 0 268640..269380 - 246 145588460 - Pnuc_0272 - exsB protein 272 46.58 0 269389..270120 - 243 145588461 - Pnuc_0273 - TPR repeat-containing protein 273 45.24 0 270121..270624 - 167 145588462 - Pnuc_0274 - OmpA/MotB domain-containing protein 274 44.93 0 270770..272080 - 436 145588463 tolB Pnuc_0275 - translocation protein TolB 275 48.71 +1 272084..272935 - 283 145588464 - Pnuc_0276 - TonB domain-containing protein 276 46.19 0 272960..273379 - 139 145588465 - Pnuc_0277 - biopolymer transport protein ExbD/TolR 277 49.01 +1 273389..274045 - 218 145588466 - Pnuc_0278 - MotA/TolQ/ExbB proton channel 278 46.10 0 274122..275366 + 414 145588467 - Pnuc_0279 - glycine hydroxymethyltransferase 279 48.10 +1 275392..275838 + 148 145588468 - Pnuc_0280 - ATP-cone domain-containing protein 280 47.00 0 275921..276586 - 221 145588469 adk Pnuc_0281 - adenylate kinase 281 48.24 +1 276690..277454 - 254 145588470 - Pnuc_0282 - 3-deoxy-D-manno-octulosonate cytidylyltransferase 282 47.54 0 277467..277649 - 60 145588471 - Pnuc_0283 - hypothetical protein 283 47.99 +1 277718..278809 - 363 145588472 - Pnuc_0284 - tetraacyldisaccharide 4'-kinase 284 41.56 -1 278830..279279 - 149 145588473 - Pnuc_0285 - biopolymer transport protein ExbD/TolR 285 46.01 0 279304..279942 - 212 145588474 - Pnuc_0286 - MotA/TolQ/ExbB proton channel 286 47.35 0 280257..281483 + 408 145588475 - Pnuc_0287 - exodeoxyribonuclease VII, large subunit 287 42.95 0 281532..282581 + 349 145588476 - Pnuc_0288 - hypothetical protein 288 47.98 +1 282601..283638 - 345 145588477 - Pnuc_0289 - UDP-N-acetylenolpyruvoylglucosamine reductase 289 40.74 -1 283744..284229 + 161 145588478 - Pnuc_0290 - hypothetical protein 290 38.10 -2 284318..284590 + 90 145588479 - Pnuc_0291 - hypothetical protein 291 49.24 +1 284636..285553 + 305 145588480 - Pnuc_0292 - tyrosine recombinase XerD 292 43.76 0 285601..286233 + 210 145588481 - Pnuc_0293 - hypothetical protein 293 45.43 0 286236..286607 + 123 145588482 - Pnuc_0294 - membrane protein-like protein 294 43.09 0 286648..287436 + 262 145588483 - Pnuc_0295 - GTP cyclohydrolase I 295 45.31 0 287833..288141 + 102 145588484 - Pnuc_0296 - high potential iron-sulfur protein 296 45.13 0 288273..288806 + 177 145588485 - Pnuc_0297 - ISPsy8, transposase OrfA 297 45.51 0 288821..289633 + 270 145588486 - Pnuc_0298 - integrase catalytic subunit 298 48.43 +1 289763..290305 + 180 145588487 - Pnuc_0299 - HPP family protein+B94 299 41.87 -1 290331..290576 - 81 145588488 - Pnuc_0300 - hypothetical protein 300 43.90 0 290637..292112 + 491 145588489 - Pnuc_0301 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 301 44.92 0 292163..293293 + 376 145588490 - Pnuc_0302 - GDP-mannose 4,6-dehydratase 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0