version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1919 47.96 +1 2006825..2007754 + 309 145590108 - Pnuc_1929 - RNA polymerase, sigma 32 subunit, RpoH 1920 44.84 0 2007776..2008366 - 196 145590109 - Pnuc_1930 - electron transport protein SCO1/SenC 1921 46.53 0 2008368..2009261 - 297 145590110 - Pnuc_1931 - protoheme IX farnesyltransferase 1922 45.09 0 2009258..2010388 - 376 145590111 - Pnuc_1932 - cytochrome oxidase assembly 1923 46.88 0 2010388..2011044 - 218 145590112 - Pnuc_1933 - putative transmembrane protein 1924 50.21 +1 2011047..2011769 - 240 145590113 - Pnuc_1934 - SURF1 family protein 1925 42.72 0 2011856..2012068 + 70 145590114 - Pnuc_1935 - hypothetical protein 1926 45.85 0 2012121..2012975 - 284 145590115 - Pnuc_1936 - cytochrome c oxidase, subunit III 1927 39.39 -2 2013005..2013202 - 65 145590116 - Pnuc_1937 - putative transmembrane protein 1928 41.75 -1 2013211..2013792 - 193 145590117 - Pnuc_1938 - cytochrome c oxidase assembly protein CtaG/Cox11 1929 46.14 0 2013920..2015551 - 543 145590118 - Pnuc_1939 - cytochrome-c oxidase 1930 44.21 0 2015592..2016749 - 385 145590119 - Pnuc_1940 - cytochrome c oxidase, subunit II 1931 43.39 0 2016930..2017685 - 251 145590120 - Pnuc_1941 - methyltransferase type 11 1932 41.13 -1 2017754..2018497 + 247 145590121 - Pnuc_1942 - phosphoribosyltransferase 1933 45.01 0 2018516..2018986 + 156 145590122 - Pnuc_1943 - RNA methyltransferase 1934 47.02 0 2019002..2020024 - 340 145590123 - Pnuc_1944 - glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 1935 42.53 0 2020049..2020570 - 173 145590124 - Pnuc_1945 - protein-export protein SecB 1936 42.35 0 2020595..2020849 - 84 145590125 - Pnuc_1946 - glutaredoxin 3 1937 47.83 +1 2020860..2021273 - 137 145590126 - Pnuc_1947 - rhodanese domain-containing protein 1938 43.04 0 2021296..2021985 + 229 145590127 - Pnuc_1948 - phosphoglycerate mutase 1 family protein 1939 43.65 0 2021999..2023432 + 477 145590128 - Pnuc_1949 - carboxyl-terminal protease 1940 45.68 0 2023459..2024211 + 250 145590129 - Pnuc_1950 - UBA/THIF-type NAD/FAD binding protein 1941 44.98 0 2024216..2025967 - 583 145590130 - Pnuc_1951 - phosphoenolpyruvate-protein phosphotransferase 1942 45.93 0 2025970..2026239 - 89 145590131 - Pnuc_1952 - phosphotransferase system, phosphocarrier protein HPr 1943 48.46 +1 2026256..2026678 - 140 145590132 - Pnuc_1953 - PTS system fructose subfamily IIA component 1944 42.46 0 2026680..2027621 - 313 145590133 - Pnuc_1954 - glutathione synthetase 1945 45.65 0 2027650..2028948 - 432 145590134 - Pnuc_1955 - glutamate--cysteine ligase 1946 46.94 0 2029054..2030538 - 494 145590135 - Pnuc_1956 - ammonium transporter 1947 46.02 0 2030552..2030890 - 112 145590136 - Pnuc_1957 - nitrogen regulatory protein P-II 1948 42.65 0 2030915..2031751 - 278 145590137 - Pnuc_1958 - putative signal peptide protein 1949 44.19 0 2032015..2032272 + 85 145590138 - Pnuc_1959 - hypothetical protein 1950 37.29 -2 2032297..2032878 - 193 145590139 - Pnuc_1960 - hypothetical protein 1951 45.70 0 2032871..2033881 - 336 145590140 - Pnuc_1961 - lipoyl synthase 1952 46.36 0 2033878..2034522 - 214 145590141 - Pnuc_1962 - lipoate-protein ligase B 1953 40.07 -1 2034532..2034798 - 88 145590142 - Pnuc_1963 - hypothetical protein 1954 47.42 0 2034816..2035532 - 238 145590143 - Pnuc_1964 - alpha/beta fold family hydrolase 1955 43.37 0 2035563..2035871 - 102 145590144 - Pnuc_1965 - putative ferredoxin 2fe-2s protein 1956 46.94 0 2035888..2036982 - 364 145590145 - Pnuc_1966 - VanZ family protein 1957 48.42 +1 2037020..2037808 + 262 145590146 - Pnuc_1967 - biotin--acetyl-CoA-carboxylase ligase 1958 46.74 0 2037805..2038617 + 270 145590147 - Pnuc_1968 - Baf family transcriptional activator 1959 44.79 0 2038626..2039114 - 162 145590148 - Pnuc_1969 - rfaE bifunctional protein 1960 41.24 -1 2039206..2039787 + 193 145590149 - Pnuc_1970 - glutathione peroxidase 1961 44.71 0 2039784..2041172 + 462 145590150 - Pnuc_1971 - amine oxidase 1962 42.24 -1 2041173..2041958 + 261 145590151 - Pnuc_1972 - hypothetical protein 1963 44.14 0 2041955..2043250 + 431 145590152 - Pnuc_1973 - cyclopropane-fatty-acyl-phospholipid synthase 1964 44.40 0 2043247..2044023 + 258 145590153 - Pnuc_1974 - short-chain dehydrogenase/reductase SDR 1965 42.44 0 2044047..2044694 - 215 145590154 - Pnuc_1975 - DSBA oxidoreductase 1966 46.34 0 2044708..2045322 - 204 145590155 - Pnuc_1976 - sporulation domain-containing protein 1967 46.12 0 2045361..2047088 - 575 145590156 - Pnuc_1977 - arginyl-tRNA synthetase 1968 45.28 0 2047124..2047441 + 105 145590157 - Pnuc_1978 - hypothetical protein 1969 46.09 0 2047438..2050188 - 916 145590158 - Pnuc_1979 - methionine synthase 1970 46.29 0 2050185..2051249 - 354 145590159 - Pnuc_1980 - methionine synthase 1971 48.43 +1 2051690..2052775 - 361 145590160 - Pnuc_1982 - beta-lactamase domain-containing protein 1972 45.20 0 2052812..2052988 + 58 145590161 - Pnuc_1983 - hypothetical protein 1973 48.07 +1 2052997..2053980 - 327 145590162 - Pnuc_1984 - alcohol dehydrogenase 1974 41.08 -1 2054068..2054364 + 98 145590163 - Pnuc_1985 - hypothetical protein 1975 43.31 0 2054375..2054875 + 166 145590164 - Pnuc_1986 - flavin reductase domain-containing protein 1976 44.80 0 2054904..2055566 + 220 145590165 - Pnuc_1987 - glutathione S-transferase domain-containing protein 1977 46.11 0 2055613..2058648 - 1011 145590166 - Pnuc_1988 - acriflavin resistance protein 1978 42.98 0 2058656..2059795 - 379 145590167 - Pnuc_1989 - RND family efflux transporter MFP subunit 1979 46.56 0 2059965..2061506 - 513 145590168 - Pnuc_1990 - RND efflux system outer membrane lipoprotein 1980 47.03 0 2061692..2063524 - 610 145590169 - Pnuc_1991 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 1981 45.36 0 2063524..2065044 - 506 145590170 - Pnuc_1992 - UDP-N-acetylglucosamine pyrophosphorylase 1982 44.77 0 2065041..2065949 - 302 145590171 - Pnuc_1993 - PP-loop domain-containing protein 1983 44.44 0 2065988..2066383 - 131 145590172 - Pnuc_1994 - dihydroneopterin aldolase 1984 46.11 0 2066411..2067232 - 273 145590173 - Pnuc_1995 - short-chain dehydrogenase/reductase SDR 1985 46.46 0 2067258..2068445 + 395 145590174 - Pnuc_1996 - hypothetical protein 1986 45.98 0 2068449..2069579 - 376 145590175 - Pnuc_1997 - polynucleotide adenylyltransferase region 1987 44.33 0 2069579..2070487 - 302 145590176 - Pnuc_1998 - NAD-dependent epimerase/dehydratase 1988 44.30 0 2070516..2072402 - 628 145590177 - Pnuc_1999 - lytic transglycosylase, catalytic 1989 47.37 0 2072548..2073174 + 208 145590178 - Pnuc_2000 - 5-formyltetrahydrofolate cyclo-ligase 1990 46.69 0 2073203..2074033 - 276 145590179 - Pnuc_2001 - 5,10-methylenetetrahydrofolate reductase 1991 44.47 0 2074071..2075516 - 481 145590180 - Pnuc_2002 - S-adenosyl-L-homocysteine hydrolase 1992 46.36 0 2075751..2076917 - 388 145590181 - Pnuc_2003 - methionine adenosyltransferase 1993 49.05 +1 2077036..2077983 + 315 145590182 - Pnuc_2004 - lipid A biosynthesis acyltransferase 1994 44.78 0 2078001..2078900 + 299 145590183 - Pnuc_2005 - lipid A biosynthesis acyltransferase 1995 47.25 0 2078959..2079813 + 284 145590184 - Pnuc_2006 - diaminopimelate epimerase 1996 46.19 0 2079832..2080500 - 222 145590185 pyrE Pnuc_2007 - orotate phosphoribosyltransferase 1997 46.36 0 2080509..2081291 + 260 145590186 - Pnuc_2008 - exodeoxyribonuclease III Xth 1998 45.75 0 2081288..2082535 - 415 145590187 - Pnuc_2009 - major facilitator transporter 1999 44.95 0 2082606..2083199 - 197 145590188 - Pnuc_2010 - methionine biosynthesis protein MetW 2000 45.88 0 2083196..2084335 - 379 145590189 metX Pnuc_2011 - homoserine O-acetyltransferase 2001 48.08 +1 2084332..2084982 - 216 145590190 slmA Pnuc_2012 - nucleoid occlusion protein 2002 45.29 0 2085001..2085903 - 300 145590191 - Pnuc_2013 - acetylglutamate kinase 2003 44.58 0 2085917..2086405 - 162 145590192 - Pnuc_2014 - TraR/DksA family transcriptional regulator 2004 45.67 0 2086518..2087579 - 353 145590193 - Pnuc_2015 - cobalamin synthesis protein, P47K 2005 49.20 +1 2087649..2088650 - 333 145590194 - Pnuc_2016 - phage integrase family protein 2006 48.44 +1 2088631..2089305 - 224 145590195 - Pnuc_2017 - hypothetical protein 2007 47.35 0 2089333..2090802 - 489 145590196 - Pnuc_2018 - glutamyl-tRNA(Gln) amidotransferase, B subunit 2008 48.35 +1 2090802..2092319 - 505 145590197 - Pnuc_2019 - glutamyl-tRNA(Gln) amidotransferase, A subunit 2009 50.00 +1 2092316..2092609 - 97 145590198 - Pnuc_2020 - glutamyl-tRNA(Gln) amidotransferase, C subunit 2010 48.47 +1 2092671..2093714 + 347 145590199 - Pnuc_2021 - cell shape determining protein MreB 2011 47.76 +1 2093739..2094674 + 311 145590200 - Pnuc_2022 - rod shape-determining protein MreC 2012 48.00 +1 2094671..2095195 + 174 145590201 - Pnuc_2023 - rod shape-determining protein MreD 2013 44.23 0 2095204..2097111 + 635 145590202 - Pnuc_2024 - peptidoglycan glycosyltransferase 2014 43.40 0 2097093..2098244 + 383 145590203 - Pnuc_2025 - rod shape-determining protein RodA 2015 42.68 0 2098320..2098640 - 106 145590204 - Pnuc_2026 - histone family protein DNA-binding protein 2016 41.26 -1 2098718..2099083 - 121 145590205 - Pnuc_2027 - hypothetical protein 2017 42.62 0 2099222..2100136 + 304 145590206 - Pnuc_2028 - aspartyl/asparaginyl beta-hydroxylase 2018 43.43 0 2100152..2100448 - 98 145590207 - Pnuc_2029 - hypothetical protein 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0