version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1796 46.58 0 1883492..1885144 - 550 145589985 - Pnuc_1805 - chaperonin GroEL 1797 45.70 0 1885173..1885463 - 96 145589986 - Pnuc_1806 - chaperonin Cpn10 1798 42.94 0 1885779..1886621 + 280 145589987 - Pnuc_1807 - putative diguanylate phosphodiesterase 1799 40.71 -1 1886621..1887244 + 207 145589988 - Pnuc_1808 - two component LuxR family transcriptional regulator 1800 40.81 -1 1887252..1889672 + 806 145589989 - Pnuc_1809 - histidine kinase 1801 44.75 0 1889721..1891262 + 513 145589990 - Pnuc_1810 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1802 46.74 0 1891208..1892296 - 362 145589991 - Pnuc_1811 - Sua5/YciO/YrdC/YwlC family protein 1803 46.58 0 1892299..1893483 - 394 145589992 - Pnuc_1812 - phosphoribosylaminoimidazole carboxylase, ATPase subunit 1804 47.27 0 1893488..1893982 - 164 145589993 - Pnuc_1813 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 1805 44.93 0 1894023..1894919 - 298 145589994 - Pnuc_1814 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1806 45.35 0 1894927..1895991 - 354 145589995 - Pnuc_1815 - fructose-1,6-bisphosphate aldolase 1807 46.90 0 1896032..1897468 - 478 145589996 - Pnuc_1816 - pyruvate kinase 1808 47.85 +1 1897471..1898682 - 403 145589997 - Pnuc_1817 - phosphoglycerate kinase 1809 44.26 0 1898876..1899799 + 307 145589998 - Pnuc_1818 - branched-chain amino acid aminotransferase 1810 48.15 +1 1899824..1900012 + 62 145589999 - Pnuc_1819 - hypothetical protein 1811 42.93 0 1900059..1901090 + 343 145590000 - Pnuc_1820 - lipopolysaccharide heptosyltransferase II 1812 46.21 0 1901113..1901547 + 144 145590001 - Pnuc_1821 - hypothetical protein 1813 43.96 0 1901557..1902177 + 206 145590002 - Pnuc_1822 - hypothetical protein 1814 46.18 0 1902179..1903867 - 562 145590003 - Pnuc_1823 - peptidase M48, Ste24p 1815 47.38 0 1903900..1904376 + 158 145590004 - Pnuc_1824 - molybdenum cofactor biosynthesis protein C 1816 41.67 -1 1904392..1905963 - 523 145590005 - Pnuc_1825 - TPR repeat-containing protein 1817 36.51 -2 1906109..1907083 + 324 145590006 - Pnuc_1826 - glycosyl transferase, group 1 1818 39.28 -2 1907098..1909383 - 761 145590007 - Pnuc_1827 - TPR repeat-containing protein 1819 45.42 0 1909463..1909975 - 170 145590008 - Pnuc_1828 - fimbrial protein pilin 1820 43.60 0 1910093..1910803 - 236 145590009 - Pnuc_1829 - integral membrane protein TerC 1821 45.53 0 1910891..1911784 - 297 145590010 - Pnuc_1830 - succinyl-CoA synthetase subunit alpha 1822 43.50 0 1911800..1912969 - 389 145590011 sucC Pnuc_1831 - succinyl-CoA synthetase subunit beta 1823 51.25 +2 1913157..1913675 - 172 145590012 - Pnuc_1832 - regulatory protein RecX 1824 44.60 0 1913680..1914771 - 363 145590013 - Pnuc_1833 - recA protein 1825 47.75 +1 1914890..1915423 - 177 145590014 - Pnuc_1834 - hypothetical protein 1826 38.72 -2 1915705..1916781 + 358 145590015 - Pnuc_1835 - hypothetical protein 1827 34.13 -2 1916778..1917407 + 209 145590016 - Pnuc_1836 - hypothetical protein 1828 37.20 -2 1917410..1917745 + 111 145590017 - Pnuc_1837 - hypothetical protein 1829 32.84 -2 1917738..1918142 + 134 145590018 - Pnuc_1838 - hypothetical protein 1830 42.44 0 1918139..1918720 - 193 145590019 - Pnuc_1839 - phage integrase family protein 1831 38.97 -2 1919113..1919307 + 64 145590020 - Pnuc_1840 - hypothetical protein 1832 32.92 -2 1919319..1919801 + 160 145590021 - Pnuc_1841 - hypothetical protein 1833 28.82 -2 1919831..1920406 - 191 145590022 - Pnuc_1842 - hypothetical protein 1834 37.02 -2 1920553..1921095 - 180 145590023 - Pnuc_1843 - hypothetical protein 1835 37.58 -2 1921219..1921665 + 148 145590024 - Pnuc_1844 - hypothetical protein 1836 39.42 -2 1922198..1923610 - 470 145590025 - Pnuc_1845 - phage integrase family protein 1837 39.81 -1 1923942..1924373 - 143 145590026 - Pnuc_1846 - hypothetical protein 1838 39.56 -1 1924430..1924750 + 106 145590027 - Pnuc_1847 - secreted protein 1839 41.34 -1 1924769..1925380 + 203 145590028 - Pnuc_1848 - MOSC domain-containing protein 1840 46.44 0 1925434..1927104 - 556 145590029 - Pnuc_1849 - major facilitator transporter 1841 44.76 0 1927385..1928014 - 209 145590030 - Pnuc_1850 - hypothetical protein 1842 43.29 0 1928104..1928796 + 230 145590031 - Pnuc_1851 - maleylacetoacetate isomerase 1843 45.90 0 1928818..1929342 - 174 145590032 - Pnuc_1852 - hexapaptide repeat-containing transferase 1844 44.90 0 1929593..1929955 + 120 145590033 - Pnuc_1854 - hypothetical protein 1845 46.18 0 1930000..1930287 + 95 145590034 - Pnuc_1855 - hypothetical protein 1846 39.49 -2 1930332..1930721 - 129 145590035 - Pnuc_1856 - OsmC family protein 1847 46.47 0 1930759..1931169 - 136 145590036 - Pnuc_1857 - rhodanese domain-containing protein 1848 43.86 0 1931228..1932490 + 420 145590037 - Pnuc_1858 - hypothetical protein 1849 44.84 0 1932558..1933904 + 448 145590038 - Pnuc_1859 - tRNA-i(6)A37 thiotransferase enzyme MiaB 1850 39.32 -2 1933894..1934361 + 155 145590039 - Pnuc_1860 - hypothetical protein 1851 46.67 0 1934416..1935255 + 279 145590040 - Pnuc_1861 - CBS domain-containing protein 1852 43.25 0 1935264..1936775 + 503 145590041 - Pnuc_1862 - apolipoprotein N-acyltransferase 1853 44.97 0 1936836..1937720 + 294 145590042 glyQ Pnuc_1863 - glycyl-tRNA synthetase subunit alpha 1854 44.93 0 1937752..1939890 + 712 145590043 glyS Pnuc_1864 - glycyl-tRNA synthetase subunit beta 1855 44.85 0 1939887..1940459 + 190 145590044 - Pnuc_1865 - histidinol-phosphate phosphatase family protein 1856 42.99 0 1940467..1941201 + 244 145590045 - Pnuc_1866 - phospholipid/glycerol acyltransferase 1857 43.11 0 1941219..1941995 - 258 145590046 - Pnuc_1867 - dimethyladenosine transferase 1858 44.25 0 1941999..1943006 - 335 145590047 - Pnuc_1868 - 4-hydroxythreonine-4-phosphate dehydrogenase 1859 43.78 0 1942981..1944435 - 484 145590048 - Pnuc_1869 - PpiC-type peptidyl-prolyl cis-trans isomerase 1860 46.02 0 1944435..1946885 - 816 145590049 - Pnuc_1870 - organic solvent tolerance protein 1861 42.42 0 1946988..1947989 + 333 145590050 - Pnuc_1871 - aminoglycoside phosphotransferase 1862 45.15 0 1948003..1948713 + 236 145590051 - Pnuc_1872 - nucleotidyl transferase 1863 45.61 0 1948700..1950076 + 458 145590052 - Pnuc_1873 - peptidase M24 1864 45.34 0 1950092..1951249 + 385 145590053 - Pnuc_1874 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 1865 46.51 0 1951402..1952418 + 338 145590054 - Pnuc_1875 - nifR3 family TIM-barrel protein 1866 38.33 -2 1952469..1952708 + 79 145590055 - Pnuc_1876 - Fis family transcriptional regulator 1867 45.86 0 1952753..1954333 + 526 145590056 purH Pnuc_1877 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1868 51.64 +2 1954340..1954858 + 172 145590057 - Pnuc_1878 - crossover junction endodeoxyribonuclease RuvC 1869 46.39 0 1954888..1955469 + 193 145590058 - Pnuc_1879 - Holliday junction DNA helicase RuvA 1870 48.09 +1 1955487..1956557 + 356 145590059 ruvB Pnuc_1880 - Holliday junction DNA helicase B 1871 46.15 0 1956573..1957805 - 410 145590060 - Pnuc_1881 - tyrosyl-tRNA synthetase 1872 45.92 0 1957882..1959009 + 375 145590061 anmK Pnuc_1882 - anhydro-N-acetylmuramic acid kinase 1873 44.80 0 1959022..1959396 - 124 145590062 - Pnuc_1883 - iron-sulfur cluster assembly accessory protein 1874 47.12 0 1959465..1960523 - 352 145590063 argC Pnuc_1884 - N-acetyl-gamma-glutamyl-phosphate reductase 1875 49.00 +1 1960636..1961037 - 133 145590064 - Pnuc_1885 - ribosomal protein S9 1876 47.55 0 1961047..1961475 - 142 145590065 rplM Pnuc_1886 - 50S ribosomal protein L13 1877 48.46 +1 1961885..1962307 + 140 145590066 - Pnuc_1887 - OsmC family protein 1878 44.38 0 1962672..1963730 - 352 145590067 - Pnuc_1888 - dihydroorotase 1879 45.75 0 1963732..1965084 - 450 145590068 - Pnuc_1889 - hydroxypyruvate reductase 1880 44.96 0 1965094..1966917 - 607 145590069 - Pnuc_1890 - ABC transporter related 1881 41.83 -1 1966927..1967385 - 152 145590070 - Pnuc_1891 - NUDIX hydrolase 1882 46.28 0 1967417..1969216 - 599 145590071 - Pnuc_1892 - aspartyl-tRNA synthetase 1883 44.04 0 1969233..1969886 - 217 145590072 - Pnuc_1893 - hypothetical protein 1884 46.12 0 1969939..1971525 - 528 145590073 - Pnuc_1894 - 2-polyprenylphenol 6-hydroxylase 1885 44.28 0 1971529..1972149 - 206 145590074 - Pnuc_1895 - hypothetical protein 1886 48.79 +1 1972203..1973114 - 303 145590075 - Pnuc_1896 - import inner membrane translocase, subunit Tim44 1887 45.56 0 1973182..1973925 - 247 145590076 - Pnuc_1897 - ubiquinone/menaquinone biosynthesis methyltransferase 1888 42.89 0 1973925..1974311 - 128 145590077 - Pnuc_1898 - hypothetical protein 1889 45.91 0 1974311..1978150 - 1279 145590078 - Pnuc_1899 - FAD linked oxidase domain-containing protein 1890 46.09 0 1978285..1979805 + 506 145590079 - Pnuc_1900 - threonine dehydratase, biosynthetic 1891 47.06 0 1979817..1980734 + 305 145590080 - Pnuc_1901 - 5-nucleotidase 1892 46.26 0 1980752..1981579 + 275 145590081 queF Pnuc_1902 - 7-cyano-7-deazaguanine reductase 1893 47.15 0 1981652..1982107 - 151 145590082 - Pnuc_1903 - single-strand binding protein 1894 46.67 0 1982189..1983373 - 394 145590083 - Pnuc_1904 - major facilitator transporter 1895 45.59 0 1983411..1986299 + 962 145590084 - Pnuc_1905 - excinuclease ABC, A subunit 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0