version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1671 44.61 0 1744815..1747943 - 1042 145589860 - Pnuc_1680 - CzcA family heavy metal efflux protein 1672 46.34 0 1747943..1749049 - 368 145589861 - Pnuc_1681 - RND family efflux transporter MFP subunit 1673 44.36 0 1749113..1749520 - 135 145589862 - Pnuc_1682 - hypothetical protein 1674 43.21 0 1749798..1750202 - 134 145589863 - Pnuc_1683 - hypothetical protein 1675 43.12 0 1750288..1750614 - 108 145589864 - Pnuc_1684 - hypothetical protein 1676 42.70 0 1750636..1751361 - 241 145589865 - Pnuc_1685 - hypothetical protein 1677 46.37 0 1751425..1752444 - 339 145589866 - Pnuc_1686 - hypothetical protein 1678 44.00 0 1752469..1752843 - 124 145589867 - Pnuc_1687 - hypothetical protein 1679 45.32 0 1753208..1754125 + 305 145589868 - Pnuc_1688 - hypothetical protein 1680 46.42 0 1754143..1754715 - 190 145589869 - Pnuc_1689 - phage integrase family protein 1681 42.53 0 1754987..1755508 - 173 145589870 - Pnuc_1690 - hypothetical protein 1682 44.82 0 1755887..1756330 + 147 145589871 - Pnuc_1691 - hypothetical protein 1683 45.18 0 1756539..1756901 + 120 145589872 - Pnuc_1692 - hypothetical protein 1684 50.54 +2 1756948..1757412 + 154 145589873 - Pnuc_1693 - hypothetical protein 1685 45.73 0 1757500..1758903 - 467 145589874 - Pnuc_1694 - phage integrase family protein 1686 41.04 -1 1758958..1759476 - 172 145589875 - Pnuc_1695 - hypothetical protein 1687 34.99 -2 1759490..1761415 - 641 145589876 - Pnuc_1696 - hypothetical protein 1688 37.83 -2 1761551..1762261 - 236 145589877 - Pnuc_1697 - hypothetical protein 1689 45.51 0 1762904..1764940 - 678 145589878 - Pnuc_1698 - RNA polymerase, sigma 70 subunit, RpoD 1690 48.81 +1 1765674..1767611 - 645 145589879 - Pnuc_1699 - DNA primase 1691 45.64 0 1767639..1768085 - 148 145589880 - Pnuc_1700 - GatB/Yqey domain-containing protein 1692 51.17 +2 1768202..1768414 - 70 145589881 - Pnuc_1701 - ribosomal protein S21 1693 46.93 0 1768493..1769566 + 357 145589882 - Pnuc_1702 - metalloendopeptidase glycoprotease family 1694 46.62 0 1769602..1770429 - 275 145589883 - Pnuc_1703 - hypothetical protein 1695 47.48 0 1770455..1772356 - 633 145589884 - Pnuc_1704 - deoxyxylulose-5-phosphate synthase 1696 47.43 0 1772373..1773287 - 304 145589885 - Pnuc_1705 - polyprenyl synthetase 1697 44.02 0 1773288..1773521 - 77 145589886 - Pnuc_1706 - exonuclease VII, small subunit 1698 47.34 0 1773684..1774790 + 368 145589887 - Pnuc_1707 - Rieske (2Fe-2S) domain-containing protein 1699 47.05 0 1774843..1775673 + 276 145589888 - Pnuc_1708 - 3-mercaptopyruvate sulfurtransferase 1700 46.64 0 1775670..1776443 - 257 145589889 - Pnuc_1709 - zinc/iron permease 1701 50.23 +1 1776448..1777323 - 291 145589890 - Pnuc_1710 - carboxymethylenebutenolidase 1702 46.93 0 1777339..1780170 - 943 145589891 - Pnuc_1711 - DNA polymerase I 1703 47.58 0 1780253..1780666 + 137 145589892 - Pnuc_1712 - putative transmembrane protein 1704 46.11 0 1780706..1781683 + 325 145589893 - Pnuc_1713 - homoserine kinase 1705 44.14 0 1781680..1782456 + 258 145589894 - Pnuc_1714 - putative transmembrane protein 1706 48.05 +1 1782453..1784816 - 787 145589895 - Pnuc_1715 - UvrD/REP helicase 1707 47.16 0 1784841..1787732 + 963 145589896 - Pnuc_1716 - valyl-tRNA synthetase 1708 45.34 0 1787764..1788654 + 296 145589897 - Pnuc_1717 - UTP-glucose-1-phosphate uridylyltransferase GalU 1709 42.28 0 1788672..1788917 - 81 145589898 - Pnuc_1718 - SirA family protein 1710 47.12 0 1788914..1791538 - 874 145589899 - Pnuc_1719 - alanyl-tRNA synthetase 1711 43.14 0 1791662..1792120 + 152 145589900 - Pnuc_1720 - hypothetical protein 1712 47.57 0 1792141..1793643 + 500 145589901 - Pnuc_1721 - hypothetical protein 1713 46.93 0 1793728..1795500 + 590 145589902 - Pnuc_1722 - glutaminyl-tRNA synthetase 1714 49.05 +1 1795481..1796377 - 298 145589903 - Pnuc_1723 - NAD-dependent epimerase/dehydratase 1715 48.23 +1 1796399..1797445 + 348 145589904 - Pnuc_1724 - CDP-6-deoxy-delta-3,4-glucoseen reductase 1716 46.40 0 1797507..1798700 + 397 145589905 argD Pnuc_1725 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 1717 46.50 0 1798723..1799436 - 237 145589906 - Pnuc_1726 - ABC transporter related 1718 47.42 0 1799436..1800209 - 257 145589907 - Pnuc_1727 - ABC transporter related 1719 45.05 0 1800206..1801297 - 363 145589908 - Pnuc_1728 - inner-membrane translocator 1720 45.62 0 1801290..1802225 - 311 145589909 - Pnuc_1729 - inner-membrane translocator 1721 44.50 0 1802293..1803474 - 393 145589910 - Pnuc_1730 - extracellular ligand-binding receptor 1722 46.15 0 1803504..1804439 - 311 145589911 - Pnuc_1731 - hydroxymethylbutenyl pyrophosphate reductase 1723 46.31 0 1804449..1804895 - 148 145589912 - Pnuc_1732 - peptidylprolyl isomerase, FKBP-type 1724 47.36 0 1804899..1805618 + 239 145589913 - Pnuc_1733 - DNA repair protein RadC 1725 45.73 0 1805766..1805999 + 77 145589914 - Pnuc_1734 - ribosomal protein L28 1726 39.88 -1 1806011..1806178 + 55 145589915 - Pnuc_1735 - ribosomal protein L33 1727 46.42 0 1806292..1807491 - 399 145589916 - Pnuc_1736 - fatty acid desaturase 1728 48.07 +1 1807521..1808918 - 465 145589917 - Pnuc_1737 - Fmu (Sun) domain-containing protein 1729 48.57 +1 1809077..1809706 - 209 145589918 - Pnuc_1738 - phosphoribosylglycinamide formyltransferase 1730 46.06 0 1809746..1810696 + 316 145589919 - Pnuc_1739 - riboflavin biosynthesis protein RibF 1731 45.56 0 1810689..1813550 + 953 145589920 ileS Pnuc_1740 - isoleucyl-tRNA synthetase 1732 45.40 0 1813567..1814055 + 162 145589921 - Pnuc_1741 - lipoprotein signal peptidase 1733 46.62 0 1814065..1815276 + 403 145589922 - Pnuc_1742 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1734 45.78 0 1815319..1815768 + 149 145589923 - Pnuc_1743 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 1735 46.35 0 1815771..1816331 + 186 145589924 - Pnuc_1744 - CMP/dCMP deaminase, zinc-binding 1736 42.86 0 1816354..1817592 - 412 145589925 - Pnuc_1745 - sodium:dicarboxylate symporter 1737 44.40 0 1817605..1819014 - 469 145589926 - Pnuc_1746 - fumarate lyase 1738 46.58 0 1819323..1819556 - 77 145589927 - Pnuc_1747 - hypothetical protein 1739 46.16 0 1819584..1821890 - 768 145589928 - Pnuc_1748 - ATP-dependent Clp protease, ATP-binding subunit clpA 1740 43.98 0 1821887..1822243 - 118 145589929 - Pnuc_1749 - ATP-dependent Clp protease adaptor protein ClpS 1741 43.14 0 1822519..1822722 + 67 145589930 - Pnuc_1750 - cold-shock DNA-binding domain-containing protein 1742 44.59 0 1822806..1823258 + 150 145589931 - Pnuc_1751 - hypothetical protein 1743 42.48 0 1823338..1823643 - 101 145589932 - Pnuc_1752 - hypothetical protein 1744 47.69 0 1823674..1824906 - 410 145589933 - Pnuc_1753 - argininosuccinate synthase 1745 47.09 0 1824945..1825925 - 326 145589934 - Pnuc_1754 - ornithine carbamoyltransferase 1746 48.18 +1 1826044..1826346 + 100 145589935 - Pnuc_1755 - hypothetical protein 1747 47.19 0 1826434..1826700 - 88 145589936 - Pnuc_1756 - ribosomal protein S20 1748 50.64 +2 1826852..1828405 + 517 145589937 - Pnuc_1757 - integral membrane protein MviN 1749 45.55 0 1828411..1829253 + 280 145589938 - Pnuc_1758 - hypothetical protein 1750 43.61 0 1829292..1829933 - 213 145589939 - Pnuc_1759 - hypothetical protein 1751 48.00 +1 1829989..1830990 + 333 145589940 - Pnuc_1760 - tRNA delta(2)-isopentenylpyrophosphate transferase 1752 48.91 +1 1831001..1832053 - 350 145589941 - Pnuc_1761 - phosphoribosylformylglycinamidine cyclo-ligase 1753 44.14 0 1832126..1833115 + 329 145589942 - Pnuc_1762 - hypothetical protein 1754 45.50 0 1833126..1833881 + 251 145589943 - Pnuc_1763 - chromosomal replication initiator, DnaA 1755 45.81 0 1833901..1834581 + 226 145589944 - Pnuc_1764 - HAD family hydrolase 1756 48.43 +1 1834578..1835981 + 467 145589945 - Pnuc_1765 - poly(A) polymerase 1757 45.45 0 1836034..1836561 + 175 145589946 - Pnuc_1766 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1758 49.82 +1 1836579..1837397 + 272 145589947 - Pnuc_1767 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1759 47.94 +1 1837405..1838547 - 380 145589948 - Pnuc_1768 - chaperone protein DnaJ 1760 46.15 0 1838648..1840582 - 644 145589949 - Pnuc_1769 - chaperone protein DnaK 1761 47.75 +1 1840730..1841284 - 184 145589950 - Pnuc_1770 - GrpE protein 1762 46.48 0 1841348..1842442 - 364 145589951 hemH Pnuc_1771 - ferrochelatase 1763 46.98 0 1842493..1843503 - 336 145589952 hrcA Pnuc_1772 - heat-inducible transcription repressor 1764 49.12 +1 1843541..1844446 + 301 145589953 - Pnuc_1773 - NAD(+) kinase 1765 47.88 +1 1844473..1846143 + 556 145589954 - Pnuc_1774 - DNA repair protein RecN 1766 46.27 0 1846140..1848953 - 937 145589955 - Pnuc_1775 - (glutamate--ammonia-ligase) adenylyltransferase 1767 43.18 0 1849030..1853184 + 1384 145589956 - Pnuc_1776 - membrane protein-like protein 1768 43.53 0 1853184..1854017 + 277 145589957 - Pnuc_1777 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1769 48.36 +1 1854043..1855533 + 496 145589958 - Pnuc_1778 - peptidase U62, modulator of DNA gyrase 1770 43.73 0 1855553..1856677 + 374 145589959 - Pnuc_1779 - phospho-2-dehydro-3-deoxyheptonate aldolase 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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