version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1433 46.82 0 1511346..1512413 - 355 145589622 lpxD Pnuc_1441 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1434 43.37 0 1512419..1512946 - 175 145589623 - Pnuc_1442 - outer membrane chaperone Skp (OmpH) 1435 43.52 0 1512965..1515241 - 758 145589624 - Pnuc_1443 - surface antigen (D15) 1436 48.41 +1 1515310..1516443 - 377 145589625 - Pnuc_1444 - putative membrane-associated zinc metalloprotease 1437 48.95 +1 1516465..1517649 - 394 145589626 - Pnuc_1445 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1438 46.38 0 1517649..1518476 - 275 145589627 - Pnuc_1446 - phosphatidate cytidylyltransferase 1439 47.16 0 1518506..1519279 - 257 145589628 - Pnuc_1447 - undecaprenyl diphosphate synthase 1440 43.32 0 1519304..1519864 - 186 145589629 - Pnuc_1448 - ribosome recycling factor 1441 47.68 0 1519876..1520586 - 236 145589630 pyrH Pnuc_1449 - uridylate kinase 1442 45.99 0 1520783..1521667 - 294 145589631 - Pnuc_1450 - translation elongation factor Ts 1443 43.20 0 1521667..1522416 - 249 145589632 - Pnuc_1451 - ribosomal protein S2 1444 45.28 0 1522685..1523521 + 278 145589633 - Pnuc_1452 - methionine aminopeptidase, type I 1445 45.65 0 1523525..1526122 + 865 145589634 - Pnuc_1453 - PII uridylyl-transferase 1446 42.09 -1 1526200..1526610 - 136 145589635 - Pnuc_1454 - DoxX family protein 1447 45.59 0 1526654..1528669 - 671 145589636 - Pnuc_1455 - DNA ligase, NAD-dependent 1448 44.95 0 1528679..1529737 - 352 145589637 - Pnuc_1456 - ZipA, C-terminal FtsZ-binding region 1449 47.76 +1 1529756..1533277 - 1173 145589638 - Pnuc_1457 - chromosome segregation protein SMC 1450 49.76 +1 1533452..1534279 + 275 145589639 - Pnuc_1458 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1451 46.27 0 1534290..1535441 + 383 145589640 - Pnuc_1459 - succinyl-diaminopimelate desuccinylase 1452 48.27 +1 1535479..1536375 + 298 145589641 - Pnuc_1460 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1453 47.40 0 1536388..1537752 - 454 145589642 - Pnuc_1461 - DNA repair protein RadA 1454 45.69 0 1537807..1538316 - 169 145589643 - Pnuc_1462 - hypothetical protein 1455 44.60 0 1538313..1540256 - 647 145589644 - Pnuc_1463 - K+ potassium transporter 1456 51.08 +2 1540586..1540957 - 123 145589645 - Pnuc_1464 - hypothetical protein 1457 44.60 0 1541006..1543411 - 801 145589646 - Pnuc_1465 - DNA internalization-related competence protein ComEC/Rec2 1458 45.04 0 1543491..1544327 - 278 145589647 - Pnuc_1466 - TatD-related deoxyribonuclease 1459 48.35 +1 1544339..1545037 - 232 145589648 - Pnuc_1467 - ABC transporter related 1460 47.27 0 1545030..1546292 - 420 145589649 - Pnuc_1468 - LolC/E family lipoprotein releasing system, transmembrane protein 1461 46.28 0 1546339..1547319 + 326 145589650 - Pnuc_1469 - hypothetical protein 1462 49.12 +1 1547316..1549076 + 586 145589651 - Pnuc_1470 - single-stranded-DNA-specific exonuclease RecJ 1463 46.00 0 1549166..1550215 + 349 145589652 - Pnuc_1471 - peptide chain release factor 2 1464 46.86 0 1550254..1551798 + 514 145589653 - Pnuc_1472 - lysyl-tRNA synthetase 1465 41.03 -1 1552268..1552774 - 168 145589654 - Pnuc_1473 - hypothetical protein 1466 42.07 -1 1552792..1553283 - 163 145589655 - Pnuc_1474 - OmpA/MotB domain-containing protein 1467 43.79 0 1553368..1553721 - 117 145589656 - Pnuc_1475 - hypothetical protein 1468 45.44 0 1553929..1554903 - 324 145589657 - Pnuc_1476 - cysteine synthase A 1469 45.24 0 1555082..1555627 + 181 145589658 - Pnuc_1477 - peptide deformylase 1470 44.17 0 1555643..1556122 - 159 145589659 - Pnuc_1478 - disulphide bond formation protein DsbB 1471 45.30 0 1556274..1557050 + 258 145589660 - Pnuc_1479 - ferredoxin--NADP(+) reductase 1472 43.52 0 1557351..1558145 + 264 145589661 - Pnuc_1480 - hypothetical protein 1473 44.17 0 1558142..1558870 + 242 145589662 - Pnuc_1481 - adenylylsulfate reductase, thioredoxin dependent 1474 46.86 0 1558893..1559816 + 307 145589663 - Pnuc_1482 - sulfate adenylyltransferase subunit 2 1475 46.21 0 1559816..1561159 + 447 145589664 - Pnuc_1483 - sulfate adenylyltransferase, large subunit 1476 50.74 +2 1561263..1562474 + 403 145589665 - Pnuc_1484 - hypothetical protein 1477 42.86 0 1562520..1562876 + 118 145589666 - Pnuc_1485 - hypothetical protein 1478 39.10 -2 1562932..1563243 - 103 145589667 - Pnuc_1486 - cytochrome c, class I 1479 43.00 0 1563254..1564474 - 406 145589668 - Pnuc_1487 - oxidoreductase, molybdopterin binding 1480 46.90 0 1564741..1565079 - 112 145589669 - Pnuc_1488 - ferredoxin, 2Fe-2S type, ISC system 1481 46.20 0 1565110..1566975 - 621 145589670 - Pnuc_1489 - Fe-S protein assembly chaperone HscA 1482 45.45 0 1567004..1567531 - 175 145589671 - Pnuc_1490 - co-chaperone Hsc20 1483 45.99 0 1567509..1567832 - 107 145589672 - Pnuc_1491 - iron-sulfur cluster assembly protein IscA 1484 45.99 0 1567851..1568237 - 128 145589673 - Pnuc_1492 - FeS cluster assembly scaffold IscU 1485 46.43 0 1568270..1569529 - 419 145589674 - Pnuc_1493 - cysteine desulfurase IscS 1486 45.26 0 1569559..1570128 - 189 145589675 - Pnuc_1494 - BadM/Rrf2 family transcriptional regulator 1487 47.29 0 1570265..1572421 - 718 145589676 - Pnuc_1495 - excinuclease ABC subunit B 1488 46.42 0 1572581..1573780 + 399 145589677 - Pnuc_1496 - aromatic amino acid aminotransferase 1489 44.42 0 1573812..1575101 + 429 145589678 - Pnuc_1497 - polyhydroxyalkanoate depolymerase, intracellular 1490 48.48 +1 1575156..1575848 + 230 145589679 - Pnuc_1498 - electron transport complex, RnfABCDGE type, B subunit 1491 43.79 0 1575845..1576504 + 219 145589680 - Pnuc_1499 - endonuclease III 1492 45.14 0 1576491..1576922 + 143 145589681 - Pnuc_1500 - hypothetical protein 1493 42.79 0 1576926..1577327 - 133 145589682 - Pnuc_1501 - hypothetical protein 1494 48.25 +1 1577324..1578496 - 390 145589683 - Pnuc_1502 - acetyl-CoA acetyltransferase 1495 45.70 0 1578520..1579182 - 220 145589684 - Pnuc_1503 - 3-oxoacid CoA-transferase, B subunit 1496 47.62 0 1579179..1579850 - 223 145589685 - Pnuc_1504 - 3-oxoacid CoA-transferase, A subunit 1497 46.03 0 1579918..1580358 - 146 145589686 - Pnuc_1505 - histidine triad (HIT) protein 1498 45.88 0 1580465..1581763 - 432 145589687 - Pnuc_1506 - isocitrate lyase 1499 45.31 0 1582036..1583271 - 411 145589688 - Pnuc_1507 - major facilitator transporter 1500 47.78 +1 1583303..1584271 - 322 145589689 - Pnuc_1508 - hypothetical protein 1501 43.78 0 1584283..1585584 - 433 145589690 - Pnuc_1509 - TRAP transporter solute receptor TAXI family protein 1502 47.05 0 1585634..1586821 - 395 145589691 - Pnuc_1510 - TPR repeat-containing protein 1503 43.89 0 1586818..1587300 - 160 145589692 - Pnuc_1511 - cytochrome C biogenesis protein 1504 44.26 0 1587297..1587827 - 176 145589693 - Pnuc_1512 - periplasmic protein thiol--disulphide oxidoreductase DsbE 1505 45.21 0 1587824..1589743 - 639 145589694 - Pnuc_1513 - cytochrome c-type biogenesis protein CcmF 1506 45.06 0 1589740..1590174 - 144 145589695 - Pnuc_1514 - CcmE/CycJ protein 1507 45.50 0 1590171..1590359 - 62 145589696 - Pnuc_1515 - heme exporter protein D (CcmD) 1508 43.97 0 1590359..1591129 - 256 145589697 - Pnuc_1516 - heme exporter protein CcmC 1509 47.83 +1 1591126..1591746 - 206 145589698 - Pnuc_1517 - heme exporter protein CcmB 1510 46.30 0 1591788..1592435 - 215 145589699 - Pnuc_1518 - heme exporter protein CcmA 1511 39.58 -1 1592641..1593216 - 191 145589700 - Pnuc_1519 - YceI family protein 1512 40.93 -1 1593268..1593846 - 192 145589701 - Pnuc_1520 - YceI family protein 1513 43.35 0 1593833..1594381 - 182 145589702 - Pnuc_1521 - cytochrome B561 1514 45.77 0 1594381..1594935 - 184 145589703 - Pnuc_1522 - putative flavodoxin 1515 42.03 -1 1594972..1595385 - 137 145589704 - Pnuc_1523 - MarR family transcriptional regulator 1516 46.15 0 1595502..1596359 - 285 145589705 - Pnuc_1524 - beta-lactamase domain-containing protein 1517 42.24 -1 1596479..1596961 - 160 145589706 - Pnuc_1525 - hypothetical protein 1518 47.20 0 1597014..1597994 - 326 145589707 - Pnuc_1526 - alcohol dehydrogenase 1519 44.98 0 1598029..1598466 - 145 145589708 - Pnuc_1527 - hypothetical protein 1520 44.27 0 1598615..1598989 + 124 145589709 - Pnuc_1528 - hypothetical protein 1521 46.67 0 1598986..1599885 + 299 145589710 - Pnuc_1529 - histone deacetylase superfamily protein 1522 40.62 -1 1599882..1600430 - 182 145589711 - Pnuc_1530 - hypothetical protein 1523 43.57 0 1600599..1601243 - 214 145589712 - Pnuc_1531 - putative lipoprotein 1524 45.96 0 1601289..1602104 - 271 145589713 - Pnuc_1532 - hypothetical protein 1525 44.80 0 1602281..1603117 - 278 145589714 - Pnuc_1533 - hypothetical protein 1526 43.26 0 1603307..1603870 + 187 145589715 - Pnuc_1534 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1527 45.67 0 1603971..1605551 + 526 145589716 - Pnuc_1535 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1528 42.32 0 1605662..1605928 - 88 145589717 - Pnuc_1536 - hypothetical protein 1529 50.65 +2 1605975..1606280 - 101 145589718 - Pnuc_1537 - hypothetical protein 1530 45.30 0 1606426..1608297 - 623 145589719 - Pnuc_1538 - TRAP C4-dicarboxylate transport system permease DctM subunit 1531 42.90 0 1608294..1609307 - 337 145589720 - Pnuc_1539 - TRAP dicarboxylate transporter, DctP subunit 1532 46.39 0 1609432..1610235 - 267 145589721 - Pnuc_1540 - short-chain dehydrogenase/reductase SDR 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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