version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1224 45.62 0 1293842..1294606 - 254 145589413 - Pnuc_1231 - putative transcriptional regulator 1225 49.45 +1 1294758..1295663 + 301 145589414 - Pnuc_1232 - patatin 1226 45.12 0 1295712..1296356 - 214 145589415 - Pnuc_1233 - NLP/P60 protein 1227 46.83 0 1296493..1298130 - 545 145589416 - Pnuc_1234 - ABC transporter related 1228 44.05 0 1298127..1299152 - 341 145589417 - Pnuc_1235 - binding-protein-dependent transport systems inner membrane component 1229 45.26 0 1299149..1300213 - 354 145589418 - Pnuc_1236 - binding-protein-dependent transport systems inner membrane component 1230 44.89 0 1300225..1302093 - 622 145589419 - Pnuc_1237 - extracellular solute-binding protein 1231 45.93 0 1302144..1302929 + 261 145589420 - Pnuc_1238 - short-chain dehydrogenase/reductase SDR 1232 47.63 0 1302926..1304254 + 442 145589421 - Pnuc_1239 - chromate transporter 1233 48.95 +1 1304359..1305312 + 317 145589422 - Pnuc_1240 - integrase catalytic subunit 1234 46.67 0 1305340..1306224 + 294 145589423 - Pnuc_1241 - hypothetical protein 1235 47.79 +1 1306249..1307625 + 458 145589424 - Pnuc_1242 - MmgE/PrpD family protein 1236 46.88 0 1307651..1308499 + 282 145589425 - Pnuc_1243 - HpcH/HpaI aldolase 1237 44.51 0 1308591..1309583 + 330 145589426 - Pnuc_1244 - hypothetical protein 1238 46.54 0 1309650..1310270 - 206 145589427 - Pnuc_1245 - hypothetical protein 1239 47.29 0 1310267..1311520 - 417 145589428 - Pnuc_1246 - BNR/Asp-box repeat-containing protein 1240 44.25 0 1311517..1313238 - 573 145589429 - Pnuc_1247 - glycosyl transferase family protein 1241 43.10 0 1313560..1314255 - 231 145589430 - Pnuc_1248 - hypothetical protein 1242 50.07 +1 1314374..1315114 + 246 145589431 - Pnuc_1249 - integrase, catalytic region 1243 47.79 +1 1315274..1316560 - 428 145589432 - Pnuc_1250 - transposase IS116/IS110/IS902 family protein 1244 44.76 0 1316985..1317833 - 282 145589433 - Pnuc_1252 - exodeoxyribonuclease III Xth 1245 46.32 0 1317826..1319280 - 484 145589434 - Pnuc_1253 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 1246 45.86 0 1319277..1320410 - 377 145589435 - Pnuc_1254 - signal transduction histidine kinase, nitrogen specific, NtrB 1247 45.83 0 1320425..1321840 - 471 145589436 - Pnuc_1255 - glutamine synthetase, type I 1248 47.34 0 1322047..1322910 - 287 145589437 - Pnuc_1256 - molybdopterin binding domain-containing protein 1249 45.52 0 1322903..1323772 - 289 145589438 - Pnuc_1257 - putative transmembrane protein 1250 42.39 0 1323803..1324774 - 323 145589439 - Pnuc_1258 - putative transmembrane protein 1251 45.26 0 1324778..1325557 - 259 145589440 - Pnuc_1259 - polysaccharide deacetylase 1252 43.16 0 1325567..1326604 - 345 145589441 - Pnuc_1260 - YVTN beta-propeller repeat-containing protein 1253 48.03 +1 1326664..1330656 - 1330 145589442 - Pnuc_1261 - ATP-dependent helicase HrpA 1254 47.25 0 1330722..1332086 + 454 145589443 - Pnuc_1262 - N-acetylglutamate synthase 1255 41.03 -1 1332101..1332373 + 90 145589444 - Pnuc_1263 - hypothetical protein 1256 45.15 0 1332633..1333343 - 236 145589445 - Pnuc_1264 - ribose 5-phosphate isomerase 1257 44.02 0 1333394..1334413 + 339 145589446 - Pnuc_1265 - transaldolase B 1258 44.94 0 1334480..1335823 - 447 145589447 - Pnuc_1266 - amidohydrolase 1259 44.13 0 1335885..1337885 - 666 145589448 - Pnuc_1267 - coenzyme A transferase 1260 44.47 0 1337937..1339337 - 466 145589449 - Pnuc_1268 - citrate transporter 1261 43.55 0 1339449..1339634 - 61 145589450 - Pnuc_1269 - hypothetical protein 1262 47.75 +1 1339651..1340406 - 251 145589451 - Pnuc_1270 - RNA methyltransferase 1263 48.12 +1 1340426..1342813 - 795 145589452 - Pnuc_1271 - ribonuclease R 1264 46.30 0 1343175..1344470 + 431 145589453 - Pnuc_1272 - amino acid permease-associated region 1265 43.75 0 1344507..1344842 - 111 145589454 - Pnuc_1273 - branched-chain amino acid transport 1266 45.87 0 1344842..1345567 - 241 145589455 - Pnuc_1274 - AzlC family protein 1267 42.77 0 1345576..1346073 - 165 145589456 - Pnuc_1275 - hypothetical protein 1268 48.25 +1 1346097..1346780 - 227 145589457 - Pnuc_1276 - carboxymethylenebutenolidase 1269 44.53 0 1346791..1348023 - 410 145589458 - Pnuc_1277 - major facilitator transporter 1270 40.31 -1 1348095..1348610 + 171 145589459 - Pnuc_1278 - hypothetical protein 1271 46.26 0 1348597..1349091 - 164 145589460 - Pnuc_1279 - hypothetical protein 1272 46.48 0 1349165..1351378 - 737 145589461 - Pnuc_1280 - malate synthase G 1273 46.46 0 1351439..1352779 - 446 145589462 - Pnuc_1281 - adenylosuccinate synthetase 1274 46.39 0 1352836..1353999 - 387 145589463 - Pnuc_1282 - tRNA synthetase, class II (G, H, P and S) 1275 45.52 0 1354020..1354889 - 289 145589464 - Pnuc_1283 - HflC protein 1276 48.54 +1 1354889..1356400 - 503 145589465 - Pnuc_1284 - HflK protein 1277 48.88 +1 1356390..1357553 - 387 145589466 - Pnuc_1285 - GTP-binding protein, HSR1-related 1278 37.04 -2 1357624..1357866 - 80 145589467 - Pnuc_1286 - RNA chaperone Hfq 1279 47.11 0 1358029..1359393 - 454 145589468 - Pnuc_1287 - small GTP-binding protein 1280 47.30 0 1359390..1360556 - 388 145589469 - Pnuc_1288 - Pyrrolo-quinoline quinone 1281 46.06 0 1360556..1361215 - 219 145589470 - Pnuc_1289 - hypothetical protein 1282 45.90 0 1361275..1362603 - 442 145589471 - Pnuc_1290 - histidyl-tRNA synthetase 1283 47.88 +1 1362628..1363899 - 423 145589472 ispG Pnuc_1291 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1284 46.90 0 1363913..1365121 - 402 145589473 - Pnuc_1292 - radical SAM protein 1285 43.90 0 1365156..1365581 - 141 145589474 - Pnuc_1293 - nucleoside-diphosphate kinase 1286 47.01 0 1365862..1366563 + 233 145589475 - Pnuc_1294 - hypothetical protein 1287 45.49 0 1366896..1368326 - 476 145589476 - Pnuc_1295 - RNA methyltransferase 1288 44.65 0 1368319..1369140 - 273 145589477 - Pnuc_1296 - 3'-5' exonuclease 1289 44.90 0 1369147..1369959 - 270 145589478 - Pnuc_1297 - peptidase M23B 1290 48.55 +1 1369956..1370612 - 218 145589479 - Pnuc_1298 - protein-L-isoaspartate O-methyltransferase 1291 49.11 +1 1370609..1371394 - 261 145589480 - Pnuc_1299 - stationary-phase survival protein SurE 1292 44.70 0 1371397..1374474 - 1025 145589481 - Pnuc_1300 - CzcA family heavy metal efflux protein 1293 44.68 0 1374475..1375734 - 419 145589482 - Pnuc_1301 - RND family efflux transporter MFP subunit 1294 45.39 0 1375744..1377261 - 505 145589483 - Pnuc_1302 - outer membrane efflux protein 1295 43.25 0 1377594..1378097 - 167 145589484 - Pnuc_1303 - hypothetical protein 1296 49.57 +1 1378156..1378974 - 272 145589485 - Pnuc_1304 - TPR repeat-containing protein 1297 45.78 0 1379079..1382636 - 1185 145589486 - Pnuc_1305 - UvrD/REP helicase 1298 45.63 0 1382639..1385623 - 994 145589487 - Pnuc_1306 - hypothetical protein 1299 46.79 0 1385744..1386070 + 108 145589488 - Pnuc_1307 - thioredoxin 1300 47.59 0 1386367..1387629 + 420 145589489 rho Pnuc_1308 - transcription termination factor Rho 1301 45.11 0 1387784..1388131 + 115 145589490 - Pnuc_1309 - ribosomal protein L31 1302 48.57 +1 1388231..1389949 + 572 145589491 - Pnuc_1310 - putative inner membrane transmembrane protein 1303 46.19 0 1389954..1391345 + 463 145589492 - Pnuc_1311 - MATE efflux family protein 1304 44.90 0 1391352..1392440 - 362 145589493 - Pnuc_1312 - hypothetical protein 1305 42.47 0 1392444..1393034 - 196 145589494 - Pnuc_1313 - membrane lipoprotein lipid attachment site 1306 42.86 0 1393058..1393414 - 118 145589495 - Pnuc_1314 - hypothetical protein 1307 43.35 0 1393427..1395133 - 568 145589496 - Pnuc_1315 - hypothetical protein 1308 47.46 0 1395183..1396187 - 334 145589497 - Pnuc_1316 - hypothetical protein 1309 45.04 0 1396222..1396785 - 187 145589498 - Pnuc_1317 - hypothetical protein 1310 45.38 0 1397045..1397824 + 259 145589499 - Pnuc_1318 - enoyl-CoA hydratase 1311 44.27 0 1397885..1398442 - 185 145589500 - Pnuc_1319 - lytic transglycosylase, catalytic 1312 43.16 0 1398493..1399530 - 345 145589501 - Pnuc_1320 - alpha/beta hydrolase fold 1313 46.61 0 1399540..1400232 - 230 145589502 - Pnuc_1321 - fumarylacetoacetate (FAA) hydrolase 1314 39.46 -2 1400263..1400556 - 97 145589503 - Pnuc_1322 - hypothetical protein 1315 46.81 0 1400629..1401630 + 333 145589504 - Pnuc_1323 - hypothetical protein 1316 44.54 0 1401648..1402370 - 240 145589505 - Pnuc_1324 - haloacid dehalogenase, type II 1317 45.32 0 1402376..1403368 - 330 145589506 - Pnuc_1325 - hypothetical protein 1318 44.94 0 1403479..1404288 - 269 145589507 - Pnuc_1326 - hypothetical protein 1319 45.11 0 1404307..1405104 - 265 145589508 - Pnuc_1327 - class II aldolase/adducin family protein 1320 43.00 0 1405228..1406127 - 299 145589509 - Pnuc_1328 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 1321 46.81 0 1406362..1408275 - 637 145589510 - Pnuc_1329 - ferrous iron transport protein B 1322 47.97 +1 1408268..1408513 - 81 145589511 - Pnuc_1330 - FeoA family protein 1323 45.59 0 1408617..1410101 + 494 145589512 - Pnuc_1331 - carbohydrate-selective porin OprB 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0