version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1171 47.32 0 1235365..1236408 - 347 145589360 - Pnuc_1177 - tRNA-dihydrouridine synthase A 1172 43.71 0 1236978..1237796 - 272 145589361 - Pnuc_1178 - hypothetical protein 1173 43.32 0 1237849..1239150 - 433 145589362 - Pnuc_1179 - amidase 1174 40.33 -1 1239214..1240185 - 323 145589363 - Pnuc_1180 - putative ABC transporter, periplasmic protein 1175 41.54 -1 1240214..1241029 - 271 145589364 - Pnuc_1181 - binding-protein-dependent transport systems inner membrane component 1176 43.09 0 1241026..1241814 - 262 145589365 - Pnuc_1182 - ABC transporter related 1177 42.40 0 1242015..1242830 - 271 145589366 - Pnuc_1183 - hypothetical protein 1178 44.87 0 1242878..1244056 + 392 145589367 - Pnuc_1184 - amidase 1179 45.48 0 1244124..1245119 + 331 145589368 - Pnuc_1185 - ABC transporter, substrate binding protein 1180 44.19 0 1245122..1245895 + 257 145589369 - Pnuc_1186 - binding-protein-dependent transport systems inner membrane component 1181 41.76 -1 1245892..1246662 + 256 145589370 - Pnuc_1187 - ABC transporter related 1182 43.43 0 1246668..1247093 + 141 145589371 - Pnuc_1188 - hypothetical protein 1183 40.90 -1 1247658..1248278 - 206 145589372 - Pnuc_1190 - urease accessory protein UreG 1184 42.71 0 1248290..1248982 - 230 145589373 - Pnuc_1191 - urease accessory protein UreF 1185 45.23 0 1248972..1249568 - 198 145589374 - Pnuc_1192 - UreE urease accessory domain-containing protein 1186 46.42 0 1249577..1251280 - 567 145589375 ureC Pnuc_1193 - urease subunit alpha 1187 43.36 0 1251280..1251618 - 112 145589376 - Pnuc_1194 - urease, beta subunit 1188 42.18 -1 1251615..1252247 - 210 145589377 - Pnuc_1195 - HupE/UreJ protein 1189 44.22 0 1252259..1252561 - 100 145589378 - Pnuc_1196 - urease, gamma subunit 1190 44.81 0 1252580..1253485 - 301 145589379 - Pnuc_1197 - urease accessory protein UreD 1191 45.17 0 1253491..1254183 - 230 145589380 - Pnuc_1198 - ABC transporter related 1192 45.99 0 1254186..1254983 - 265 145589381 - Pnuc_1199 - ABC transporter related 1193 44.01 0 1254980..1256122 - 380 145589382 - Pnuc_1200 - inner-membrane translocator 1194 43.24 0 1256125..1257708 - 527 145589383 - Pnuc_1201 - inner-membrane translocator 1195 43.97 0 1257762..1259021 - 419 145589384 - Pnuc_1202 - putative urea/short-chain amide-binding signal peptide protein 1196 43.91 0 1259689..1260993 - 434 145589385 - Pnuc_1203 - secretory lipase 1197 45.42 0 1261254..1261559 - 101 145589386 - Pnuc_1204 - hypothetical protein 1198 44.25 0 1261563..1262771 - 402 145589387 - Pnuc_1205 - hypothetical protein 1199 44.70 0 1262768..1264210 - 480 145589388 - Pnuc_1206 - hypothetical protein 1200 41.44 -1 1264260..1264592 - 110 145589389 - Pnuc_1207 - hypothetical protein 1201 42.35 0 1264821..1265075 - 84 145589390 - Pnuc_1208 - hypothetical protein 1202 39.58 -1 1265101..1265484 - 127 145589391 - Pnuc_1209 - hypothetical protein 1203 46.25 0 1265625..1267265 + 546 145589392 - Pnuc_1210 - glutamate synthase (NADPH) 1204 38.91 -2 1267262..1268104 - 280 145589393 - Pnuc_1211 - diguanylate cyclase 1205 44.33 0 1268496..1269395 - 299 145589394 - Pnuc_1212 - pseudouridine synthase 1206 44.91 0 1269443..1269658 - 71 145589395 - Pnuc_1213 - hypothetical protein 1207 42.80 0 1269674..1270888 - 404 145589396 - Pnuc_1214 - polyhydroxyalkanoate depolymerase, intracellular 1208 44.05 0 1270888..1271223 - 111 145589397 - Pnuc_1215 - hypothetical protein 1209 44.98 0 1271214..1271651 - 145 145589398 - Pnuc_1216 - cupin 2 domain-containing protein 1210 44.09 0 1271654..1272313 - 219 145589399 - Pnuc_1217 - glutathione S-transferase domain-containing protein 1211 46.74 0 1272487..1275894 + 1135 145589400 - Pnuc_1218 - transglutaminase domain-containing protein 1212 46.35 0 1275906..1278518 + 870 145589401 - Pnuc_1219 - hypothetical protein 1213 47.40 0 1278531..1279454 + 307 145589402 - Pnuc_1220 - transglutaminase domain-containing protein 1214 41.06 -1 1279460..1280287 - 275 145589403 - Pnuc_1221 - hypothetical protein 1215 45.69 0 1280317..1282671 - 784 145589404 - Pnuc_1222 - RNA-binding S1 domain-containing protein 1216 46.87 0 1282728..1283909 + 393 145589405 - Pnuc_1223 - major facilitator transporter 1217 45.82 0 1283969..1285786 - 605 145589406 - Pnuc_1224 - GTP-binding protein TypA 1218 45.43 0 1285853..1286761 - 302 145589407 - Pnuc_1225 - tRNA pseudouridine synthase B 1219 43.09 0 1286765..1287133 - 122 145589408 - Pnuc_1226 - ribosome-binding factor A 1220 47.85 +1 1287154..1289916 - 920 145589409 - Pnuc_1227 - translation initiation factor IF-2 1221 46.15 0 1289930..1291411 - 493 145589410 nusA Pnuc_1228 - transcription elongation factor NusA 1222 47.15 0 1291408..1291899 - 163 145589411 - Pnuc_1229 - hypothetical protein 1223 51.81 +2 1292072..1293835 - 587 145589412 - Pnuc_1230 - pseudouridine synthase 1224 45.62 0 1293842..1294606 - 254 145589413 - Pnuc_1231 - putative transcriptional regulator 1225 49.45 +1 1294758..1295663 + 301 145589414 - Pnuc_1232 - patatin 1226 45.12 0 1295712..1296356 - 214 145589415 - Pnuc_1233 - NLP/P60 protein 1227 46.83 0 1296493..1298130 - 545 145589416 - Pnuc_1234 - ABC transporter related 1228 44.05 0 1298127..1299152 - 341 145589417 - Pnuc_1235 - binding-protein-dependent transport systems inner membrane component 1229 45.26 0 1299149..1300213 - 354 145589418 - Pnuc_1236 - binding-protein-dependent transport systems inner membrane component 1230 44.89 0 1300225..1302093 - 622 145589419 - Pnuc_1237 - extracellular solute-binding protein 1231 45.93 0 1302144..1302929 + 261 145589420 - Pnuc_1238 - short-chain dehydrogenase/reductase SDR 1232 47.63 0 1302926..1304254 + 442 145589421 - Pnuc_1239 - chromate transporter 1233 48.95 +1 1304359..1305312 + 317 145589422 - Pnuc_1240 - integrase catalytic subunit 1234 46.67 0 1305340..1306224 + 294 145589423 - Pnuc_1241 - hypothetical protein 1235 47.79 +1 1306249..1307625 + 458 145589424 - Pnuc_1242 - MmgE/PrpD family protein 1236 46.88 0 1307651..1308499 + 282 145589425 - Pnuc_1243 - HpcH/HpaI aldolase 1237 44.51 0 1308591..1309583 + 330 145589426 - Pnuc_1244 - hypothetical protein 1238 46.54 0 1309650..1310270 - 206 145589427 - Pnuc_1245 - hypothetical protein 1239 47.29 0 1310267..1311520 - 417 145589428 - Pnuc_1246 - BNR/Asp-box repeat-containing protein 1240 44.25 0 1311517..1313238 - 573 145589429 - Pnuc_1247 - glycosyl transferase family protein 1241 43.10 0 1313560..1314255 - 231 145589430 - Pnuc_1248 - hypothetical protein 1242 50.07 +1 1314374..1315114 + 246 145589431 - Pnuc_1249 - integrase, catalytic region 1243 47.79 +1 1315274..1316560 - 428 145589432 - Pnuc_1250 - transposase IS116/IS110/IS902 family protein 1244 44.76 0 1316985..1317833 - 282 145589433 - Pnuc_1252 - exodeoxyribonuclease III Xth 1245 46.32 0 1317826..1319280 - 484 145589434 - Pnuc_1253 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 1246 45.86 0 1319277..1320410 - 377 145589435 - Pnuc_1254 - signal transduction histidine kinase, nitrogen specific, NtrB 1247 45.83 0 1320425..1321840 - 471 145589436 - Pnuc_1255 - glutamine synthetase, type I 1248 47.34 0 1322047..1322910 - 287 145589437 - Pnuc_1256 - molybdopterin binding domain-containing protein 1249 45.52 0 1322903..1323772 - 289 145589438 - Pnuc_1257 - putative transmembrane protein 1250 42.39 0 1323803..1324774 - 323 145589439 - Pnuc_1258 - putative transmembrane protein 1251 45.26 0 1324778..1325557 - 259 145589440 - Pnuc_1259 - polysaccharide deacetylase 1252 43.16 0 1325567..1326604 - 345 145589441 - Pnuc_1260 - YVTN beta-propeller repeat-containing protein 1253 48.03 +1 1326664..1330656 - 1330 145589442 - Pnuc_1261 - ATP-dependent helicase HrpA 1254 47.25 0 1330722..1332086 + 454 145589443 - Pnuc_1262 - N-acetylglutamate synthase 1255 41.03 -1 1332101..1332373 + 90 145589444 - Pnuc_1263 - hypothetical protein 1256 45.15 0 1332633..1333343 - 236 145589445 - Pnuc_1264 - ribose 5-phosphate isomerase 1257 44.02 0 1333394..1334413 + 339 145589446 - Pnuc_1265 - transaldolase B 1258 44.94 0 1334480..1335823 - 447 145589447 - Pnuc_1266 - amidohydrolase 1259 44.13 0 1335885..1337885 - 666 145589448 - Pnuc_1267 - coenzyme A transferase 1260 44.47 0 1337937..1339337 - 466 145589449 - Pnuc_1268 - citrate transporter 1261 43.55 0 1339449..1339634 - 61 145589450 - Pnuc_1269 - hypothetical protein 1262 47.75 +1 1339651..1340406 - 251 145589451 - Pnuc_1270 - RNA methyltransferase 1263 48.12 +1 1340426..1342813 - 795 145589452 - Pnuc_1271 - ribonuclease R 1264 46.30 0 1343175..1344470 + 431 145589453 - Pnuc_1272 - amino acid permease-associated region 1265 43.75 0 1344507..1344842 - 111 145589454 - Pnuc_1273 - branched-chain amino acid transport 1266 45.87 0 1344842..1345567 - 241 145589455 - Pnuc_1274 - AzlC family protein 1267 42.77 0 1345576..1346073 - 165 145589456 - Pnuc_1275 - hypothetical protein 1268 48.25 +1 1346097..1346780 - 227 145589457 - Pnuc_1276 - carboxymethylenebutenolidase 1269 44.53 0 1346791..1348023 - 410 145589458 - Pnuc_1277 - major facilitator transporter 1270 40.31 -1 1348095..1348610 + 171 145589459 - Pnuc_1278 - hypothetical protein 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0