version 1.0
Polynucleobacter sp. QLW-P1DMWA-1, complete genome - 1..2159490 2077 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1007 47.00 0 1011005..1012870 - 621 145589196 - Pnuc_1013 - ATP-dependent metalloprotease FtsH 1008 44.74 0 1013041..1013715 - 224 145589197 - Pnuc_1014 - ribosomal RNA methyltransferase RrmJ/FtsJ 1009 46.41 0 1013843..1014469 + 208 145589198 - Pnuc_1015 - hypothetical protein 1010 40.79 -1 1014538..1015020 - 160 145589199 - Pnuc_1016 - hypothetical protein 1011 43.61 0 1015020..1015496 - 158 145589200 - Pnuc_1017 - transcription elongation factor GreA 1012 45.74 0 1015555..1018818 - 1087 145589201 carB Pnuc_1018 - carbamoyl phosphate synthase large subunit 1013 46.48 0 1018818..1020011 - 397 145589202 - Pnuc_1019 - carbamoyl-phosphate synthase, small subunit 1014 45.86 0 1020276..1022159 - 627 145589203 - Pnuc_1020 - propionyl-CoA synthetase 1015 43.86 0 1022194..1023627 - 477 145589204 - Pnuc_1021 - lytic transglycosylase, catalytic 1016 44.44 0 1023627..1024436 - 269 145589205 - Pnuc_1022 - hydroxyacylglutathione hydrolase 1017 47.50 0 1024443..1025261 + 272 145589206 - Pnuc_1023 - methyltransferase type 11 1018 46.67 0 1025271..1025735 + 154 145589207 - Pnuc_1024 - ribonuclease H 1019 44.22 0 1025846..1027159 + 437 145589208 - Pnuc_1025 - RND family efflux transporter MFP subunit 1020 44.89 0 1027156..1030254 + 1032 145589209 - Pnuc_1026 - acriflavin resistance protein 1021 44.30 0 1030254..1030964 + 236 145589210 - Pnuc_1027 - DNA polymerase III, epsilon subunit 1022 45.50 0 1030978..1032111 - 377 145589211 - Pnuc_1028 - tartrate dehydrogenase 1023 44.31 0 1032214..1032978 - 254 145589212 - Pnuc_1029 - hypothetical protein 1024 45.36 0 1033090..1033887 - 265 145589213 - Pnuc_1030 - hypothetical protein 1025 49.17 +1 1034008..1034670 - 220 145589214 - Pnuc_1031 - hypothetical protein 1026 48.05 +1 1034740..1036050 + 436 145589215 - Pnuc_1032 - amidase 1027 45.60 0 1036059..1037036 - 325 145589216 - Pnuc_1033 - hypothetical protein 1028 48.75 +1 1037087..1038208 - 373 145589217 - Pnuc_1034 - NADH:flavin oxidoreductase/NADH oxidase 1029 46.22 0 1038370..1039890 + 506 145589218 - Pnuc_1035 - methylmalonate-semialdehyde dehydrogenase 1030 48.58 +1 1039956..1040447 - 163 145589219 - Pnuc_1036 - hypothetical protein 1031 43.17 0 1040513..1041112 - 199 145589220 - Pnuc_1037 - NUDIX hydrolase 1032 44.13 0 1041234..1042733 - 499 145589221 - Pnuc_1038 - proton-translocating NADH-quinone oxidoreductase, chain N 1033 43.29 0 1042744..1044210 - 488 145589222 - Pnuc_1039 - proton-translocating NADH-quinone oxidoreductase, chain M 1034 44.56 0 1044235..1046292 - 685 145589223 - Pnuc_1040 - proton-translocating NADH-quinone oxidoreductase, chain L 1035 39.48 -2 1046295..1046603 - 102 145589224 - Pnuc_1041 - NADH-ubiquinone oxidoreductase, chain 4L 1036 43.21 0 1046600..1047247 - 215 145589225 - Pnuc_1042 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 1037 40.24 -1 1047268..1047759 - 163 145589226 - Pnuc_1043 - NADH dehydrogenase subunit I 1038 43.76 0 1047771..1048844 - 357 145589227 - Pnuc_1044 - respiratory-chain NADH dehydrogenase, subunit 1 1039 45.81 0 1048853..1051168 - 771 145589228 - Pnuc_1045 - NADH-quinone oxidoreductase, chain G 1040 46.65 0 1051200..1052498 - 432 145589229 - Pnuc_1046 - NADH-quinone oxidoreductase, F subunit 1041 41.62 -1 1052495..1053001 - 168 145589230 - Pnuc_1047 - NADH-quinone oxidoreductase, E subunit 1042 44.82 0 1053025..1054278 - 417 145589231 - Pnuc_1048 - NADH dehydrogenase subunit D 1043 44.17 0 1054282..1054881 - 199 145589232 - Pnuc_1049 - NADH (or F420H2) dehydrogenase, subunit C 1044 48.86 +1 1054885..1055367 - 160 145589233 - Pnuc_1050 - NADH-quinone oxidoreductase, B subunit 1045 43.61 0 1055373..1055732 - 119 145589234 - Pnuc_1051 - NADH dehydrogenase subunit A 1046 49.57 +1 1056012..1056356 - 114 145589235 - Pnuc_1052 - preprotein translocase, SecG subunit 1047 46.77 0 1056379..1057137 - 252 145589236 - Pnuc_1053 - Triose-phosphate isomerase 1048 47.15 0 1057154..1058152 - 332 145589237 - Pnuc_1054 - alcohol dehydrogenase 1049 46.33 0 1058183..1060351 - 722 145589238 - Pnuc_1055 - polynucleotide phosphorylase/polyadenylase 1050 47.78 +1 1060620..1060889 - 89 145589239 - Pnuc_1056 - ribosomal protein S15 1051 41.08 -1 1061098..1061691 + 197 145589240 - Pnuc_1057 - putative lipoprotein 1052 46.77 0 1061718..1063265 - 515 145589241 - Pnuc_1058 - 2-isopropylmalate synthase 1053 45.53 0 1063500..1064360 - 286 145589242 - Pnuc_1059 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1054 44.14 0 1064383..1065030 - 215 145589243 - Pnuc_1060 - phosphatidylserine decarboxylase 1055 45.23 0 1065070..1066086 - 338 145589244 - Pnuc_1061 - ketol-acid reductoisomerase 1056 45.53 0 1066138..1066629 - 163 145589245 ilvH Pnuc_1062 - acetolactate synthase 3 regulatory subunit 1057 45.47 0 1066629..1068416 - 595 145589246 - Pnuc_1063 - acetolactate synthase, large subunit, biosynthetic type 1058 45.26 0 1068610..1069179 + 189 145589247 - Pnuc_1064 - ECF subfamily RNA polymerase sigma-24 factor 1059 48.50 +1 1069176..1069643 + 155 145589248 - Pnuc_1065 - putative transmembrane protein 1060 47.62 0 1069664..1070293 + 209 145589249 - Pnuc_1066 - hypothetical protein 1061 45.07 0 1070312..1070848 + 178 145589250 - Pnuc_1067 - RDD domain-containing protein 1062 45.30 0 1070866..1073364 - 832 145589251 - Pnuc_1068 - hypothetical protein 1063 48.47 +1 1073361..1074146 - 261 145589252 - Pnuc_1069 - short-chain dehydrogenase/reductase SDR 1064 47.45 0 1074194..1075192 - 332 145589253 - Pnuc_1070 - hypothetical protein 1065 44.82 0 1075194..1075820 - 208 145589254 - Pnuc_1071 - hypothetical protein 1066 43.33 0 1075817..1076746 - 309 145589255 - Pnuc_1072 - hypothetical protein 1067 43.76 0 1076743..1077519 - 258 145589256 - Pnuc_1073 - ABC transporter related 1068 45.52 0 1077519..1078700 - 393 145589257 - Pnuc_1074 - hypothetical protein 1069 46.51 0 1078883..1079383 + 166 145589258 - Pnuc_1075 - transcription elongation factor GreB 1070 46.84 0 1079396..1081720 - 774 145589259 - Pnuc_1076 - (p)ppGpp synthetase I, SpoT/RelA 1071 45.10 0 1081811..1082014 - 67 145589260 - Pnuc_1077 - DNA-directed RNA polymerase subunit omega 1072 46.95 0 1082059..1082697 - 212 145589261 - Pnuc_1078 - guanylate kinase 1073 50.97 +2 1082714..1083643 - 309 145589262 - Pnuc_1079 - hypothetical protein 1074 47.64 0 1083700..1084440 + 246 145589263 - Pnuc_1080 - ribonuclease PH 1075 49.07 +1 1084453..1085043 + 196 145589264 - Pnuc_1081 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1076 43.77 0 1085036..1086214 + 392 145589265 - Pnuc_1082 - putative oxygen-independent coproporphyrinogen III oxidase 1077 47.24 0 1086256..1087269 + 337 145589266 - Pnuc_1083 - hypothetical protein 1078 46.01 0 1087337..1089442 - 701 145589267 - Pnuc_1084 - beta-lactamase domain-containing protein 1079 42.27 0 1089554..1090996 - 480 145589268 - Pnuc_1085 - integral membrane sensor signal transduction histidine kinase 1080 46.52 0 1091099..1092334 + 411 145589269 - Pnuc_1086 - patatin 1081 36.38 -2 1092378..1093295 + 305 145589270 - Pnuc_1087 - hypothetical protein 1082 44.13 0 1093464..1095065 - 533 145589271 - Pnuc_1088 - thiamine pyrophosphate binding domain-containing protein 1083 46.02 0 1095273..1095674 - 133 145589272 - Pnuc_1089 - hypothetical protein 1084 46.97 0 1096354..1097490 - 378 145589273 - Pnuc_1090 - FAD dependent oxidoreductase 1085 45.21 0 1097628..1099160 + 510 145589274 - Pnuc_1091 - glucose-6-phosphate isomerase 1086 44.88 0 1099221..1100606 + 461 145589275 - Pnuc_1092 - phosphomannomutase 1087 43.43 0 1100612..1100908 - 98 145589276 - Pnuc_1093 - hypothetical protein 1088 45.16 0 1100933..1102648 - 571 145589277 - Pnuc_1094 - polypeptide-transport-associated domain-containing protein 1089 45.10 0 1102872..1134161 - 10429 145589278 - Pnuc_1095 - outer membrane autotransporter 1090 43.91 0 1134373..1139667 - 1764 145589279 - Pnuc_1096 - sulfotransferase 1091 44.25 0 1139797..1141014 + 405 145589280 - Pnuc_1097 - hypothetical protein 1092 42.64 0 1141042..1141836 - 264 145589281 - Pnuc_1098 - FkbM family methyltransferase 1093 38.95 -2 1141837..1142424 - 195 145589282 - Pnuc_1099 - adenylyl-sulfate kinase 1094 47.48 0 1142449..1143183 - 244 145589283 - Pnuc_1100 - peptidase M48, Ste24p 1095 43.59 0 1143478..1144140 + 220 145589284 - Pnuc_1101 - hypothetical protein 1096 39.46 -2 1144190..1144891 + 233 145589285 - Pnuc_1102 - hypothetical protein 1097 47.70 0 1144985..1146112 + 375 145589286 - Pnuc_1103 - quinolinate synthetase 1098 47.09 0 1146208..1147065 + 285 145589287 - Pnuc_1104 - nicotinate-nucleotide pyrophosphorylase 1099 41.74 -1 1147073..1148452 - 459 145589288 - Pnuc_1105 - TRAP transporter solute receptor TAXI family protein 1100 47.26 0 1148518..1150176 - 552 145589289 - Pnuc_1106 - L-aspartate oxidase 1101 42.69 0 1150447..1150788 - 113 145589290 - Pnuc_1107 - transcriptional modulator of MazE/toxin, MazF 1102 43.21 0 1150788..1151030 - 80 145589291 - Pnuc_1108 - transcriptional regulator/antitoxin, MazE 1103 46.68 0 1151177..1154068 - 963 145589292 - Pnuc_1109 - formate dehydrogenase, alpha subunit 1104 46.76 0 1154107..1155909 - 600 145589293 - Pnuc_1110 - NADH dehydrogenase (quinone) 1105 44.69 0 1156294..1158714 - 806 145589294 - Pnuc_1111 - hypothetical protein 1106 43.77 0 1158794..1159387 + 197 145589295 - Pnuc_1112 - hypothetical protein 45.00 MEAN 2.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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