version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 800 55.25 -1 851709..852260 + 183 121603719 - Pnap_0808 - transcription elongation factor GreB 801 58.76 0 852358..854595 - 745 121603720 - Pnap_0809 - (p)ppGpp synthetase I, SpoT/RelA 802 55.39 -1 854713..854916 - 67 121603721 - Pnap_0810 - DNA-directed RNA polymerase subunit omega 803 56.84 -1 854942..855562 - 206 121603722 - Pnap_0811 - guanylate kinase 804 62.31 0 855615..856532 - 305 121603723 - Pnap_0812 - hypothetical protein 805 58.33 0 856598..857605 + 335 121603724 - Pnap_0813 - protein kinase 806 61.33 0 857602..858501 + 299 121603725 - Pnap_0814 - protein phosphatase 2C domain-containing protein 807 64.37 0 858598..859206 + 202 121603726 - Pnap_0815 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 808 63.14 0 859225..860415 + 396 121603727 - Pnap_0816 - putative oxygen-independent coproporphyrinogen III oxidase 809 60.47 0 860439..860696 + 85 121603728 - Pnap_0817 - hypothetical protein 810 59.51 0 860973..863096 - 707 121603729 metG Pnap_0818 - methionyl-tRNA synthetase 811 67.93 0 863303..865672 + 789 121603730 - Pnap_0819 - ATP-dependent protease La 812 70.72 +1 865711..867438 + 575 121603731 - Pnap_0820 - phosphotransferase domain-containing protein 813 63.74 0 867529..868074 + 181 121603732 - Pnap_0821 - putative sigma 54 modulation protein/ribosomal protein S30EA 814 63.37 0 868226..869317 + 363 121603733 - Pnap_0822 - hypothetical protein 815 68.35 +1 869369..870319 + 316 121603734 - Pnap_0823 - LysR family transcriptional regulator 816 36.03 -2 870396..871472 + 358 121603735 - Pnap_0824 - hypothetical protein 817 66.28 0 871599..873401 + 600 121603736 - Pnap_0825 - NADH dehydrogenase (quinone) 818 69.86 +1 876417..877262 + 281 121603737 - Pnap_0828 - hypothetical protein 819 67.67 0 877408..877905 - 165 121603738 - Pnap_0829 - NLP/P60 protein 820 67.61 0 878133..878663 + 176 121603739 - Pnap_0830 - hypothetical protein 821 66.39 0 878656..879369 + 237 121603740 - Pnap_0831 - hypothetical protein 822 66.76 0 879296..881428 + 710 121603741 - Pnap_0832 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 823 65.85 0 881444..882058 + 204 121603742 - Pnap_0833 - cytoplasmic chaperone TorD family protein 824 63.21 0 882477..885452 + 991 121603743 - Pnap_0834 - molybdopterin oxidoreductase 825 64.90 0 885457..886077 + 206 121603744 - Pnap_0835 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 826 64.04 0 886074..886301 + 75 121603745 - Pnap_0836 - putative lipoprotein 827 64.19 0 886318..887490 + 390 121603746 - Pnap_0837 - formate dehydrogenase, gamma subunit 828 67.42 0 887513..887908 + 131 121603747 - Pnap_0838 - hypothetical protein 829 62.54 0 887975..888847 + 290 121603748 - Pnap_0839 - formate dehydrogenase, subunit FdhD 830 65.54 0 888926..889900 - 324 121603749 - Pnap_0840 - hypothetical protein 831 67.97 0 889959..890723 - 254 121603750 - Pnap_0841 - short-chain dehydrogenase/reductase SDR 832 67.07 0 890720..891457 - 245 121603751 - Pnap_0842 - fumarylacetoacetate (FAA) hydrolase 833 65.33 0 891454..892428 - 324 121603752 - Pnap_0843 - hypothetical protein 834 70.02 +1 892486..893439 - 317 121603753 - Pnap_0844 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 835 66.24 0 893581..894753 + 390 121603754 - Pnap_0845 - citrate synthase 836 68.53 +1 894869..897445 + 858 121603755 - Pnap_0846 - hypothetical protein 837 67.82 0 897460..897891 + 143 121603756 - Pnap_0847 - globin 838 62.02 0 898032..899366 + 444 121603757 - Pnap_0848 - hypothetical protein 839 61.66 0 899381..900997 + 538 121603758 - Pnap_0849 - MORN repeat-containing protein 840 64.30 0 901097..902194 - 365 121603759 - Pnap_0850 - ABC transporter related 841 69.25 +1 902279..903901 + 540 121603760 - Pnap_0851 - binding-protein-dependent transport systems inner membrane component 842 54.95 -1 904080..904301 + 73 121603761 - Pnap_0852 - CsbD family protein 843 56.32 -1 904357..904926 + 189 121603762 - Pnap_0853 - hypothetical protein 844 47.62 -2 905043..905357 - 104 121603763 - Pnap_0854 - hypothetical protein 845 62.76 0 905437..907767 + 776 121603764 - Pnap_0855 - GAF sensor hybrid histidine kinase 846 67.83 0 907982..912022 - 1346 121603765 - Pnap_0856 - hypothetical protein 847 66.92 0 912022..913977 - 651 121603766 - Pnap_0857 - surface antigen (D15) 848 59.40 0 914044..915267 - 407 121603767 - Pnap_0858 - hypothetical protein 849 63.65 0 915283..915879 - 198 121603768 - Pnap_0859 - hypothetical protein 850 58.72 0 915904..916746 - 280 121603769 - Pnap_0860 - ATPase 851 58.41 0 916879..917556 + 225 121603770 - Pnap_0861 - cytochrome c, class I 852 60.46 0 917643..918077 - 144 121603771 - Pnap_0862 - hypothetical protein 853 57.21 -1 918232..918453 + 73 121603772 - Pnap_0863 - hypothetical protein 854 63.80 0 918486..919322 - 278 121603773 - Pnap_0864 - beta-ketoadipate pathway transcription regulator 855 65.54 0 919468..920178 + 236 121603774 - Pnap_0865 - 3-oxoacid CoA-transferase, A subunit 856 64.96 0 920197..920841 + 214 121603775 - Pnap_0866 - 3-oxoacid CoA-transferase, B subunit 857 68.32 +1 920891..922099 + 402 121603776 - Pnap_0867 - beta-ketoadipyl CoA thiolase 858 68.84 +1 922105..922839 + 244 121603777 - Pnap_0868 - short-chain dehydrogenase/reductase SDR 859 65.29 0 922885..923904 + 339 121603778 - Pnap_0869 - hypothetical protein 860 67.13 0 923909..924550 - 213 121603779 - Pnap_0870 - hypothetical protein 861 58.67 0 924706..925743 + 345 121603780 - Pnap_0871 - ISXo7 transposase 862 65.20 0 925769..927676 - 635 121603781 - Pnap_0872 - glutathione-regulated potassium-efflux system protein KefC 863 64.04 0 927738..928193 + 151 121603782 - Pnap_0873 - dehydratase 864 66.67 0 928215..928694 - 159 121603783 - Pnap_0874 - RNA methyltransferase 865 71.09 +1 928765..929532 - 255 121603784 - Pnap_0875 - hypothetical protein 866 65.01 0 929576..930478 + 300 121603785 - Pnap_0876 - biotin synthesis protein BioC 867 61.41 0 930646..931140 + 164 121603786 - Pnap_0877 - putative transmembrane protein 868 59.29 0 931255..932460 + 401 121603787 - Pnap_0878 - cytochrome c oxidase, subunit II 869 60.43 0 932554..934188 + 544 121603788 - Pnap_0879 - cytochrome-c oxidase 870 60.10 0 934350..934928 + 192 121603789 - Pnap_0880 - cytochrome C oxidase assembly protein 871 56.34 -1 934925..935137 + 70 121603790 - Pnap_0881 - hypothetical protein 872 59.75 0 935197..936078 + 293 121603791 - Pnap_0882 - cytochrome c oxidase, subunit III 873 52.70 -1 936164..936385 - 73 121603792 - Pnap_0883 - putative transmembrane protein 874 59.30 0 936404..937150 + 248 121603793 - Pnap_0884 - putative transmembrane cytochrome oxidase 875 63.70 0 937309..937881 + 190 121603794 - Pnap_0885 - hypothetical protein 876 65.82 0 938028..939206 + 392 121603795 - Pnap_0886 - cytochrome oxidase assembly 877 63.63 0 939203..940123 + 306 121603796 - Pnap_0887 - protoheme IX farnesyltransferase 878 60.66 0 940120..940752 + 210 121603797 - Pnap_0888 - electron transport protein SCO1/SenC 879 60.78 0 940820..941788 - 322 121603798 - Pnap_0889 - RNA polymerase, sigma 32 subunit, RpoH 880 59.72 0 942058..942345 - 95 121603799 - Pnap_0890 - hypothetical protein 881 65.90 0 942444..943616 - 390 121603800 - Pnap_0891 - signal recognition particle-docking protein FtsY 882 68.93 +1 943645..945144 + 499 121603801 - Pnap_0892 - peptidase M16 domain-containing protein 883 65.04 0 945176..946531 + 451 121603802 - Pnap_0893 - peptidase M16 domain-containing protein 884 68.44 +1 946528..947202 + 224 121603803 - Pnap_0894 - putative methyltransferase 885 59.58 0 947268..947789 + 173 121603804 - Pnap_0895 - pantetheine-phosphate adenylyltransferase 886 58.15 0 947794..948063 + 89 121603805 - Pnap_0896 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 887 60.17 0 948167..948859 - 230 121603806 - Pnap_0897 - peptidyl-tRNA hydrolase 888 59.82 0 948954..949610 - 218 121603807 - Pnap_0898 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 889 59.49 0 949720..950694 - 324 121603808 - Pnap_0899 - ribose-phosphate pyrophosphokinase 890 57.27 -1 951061..951954 - 297 121603809 - Pnap_0900 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 891 55.75 -1 951999..952511 - 170 121603810 - Pnap_0901 - putative lipoprotein 892 62.83 0 952524..954401 - 625 121603811 - Pnap_0902 - tetratricopeptide domain-containing protein 893 62.13 0 954445..955260 + 271 121603812 - Pnap_0903 - formamidopyrimidine-DNA glycosylase 894 60.34 0 955325..957301 + 658 121603813 - Pnap_0904 - hypothetical protein 895 62.34 0 957301..958455 + 384 121603814 - Pnap_0905 - A/G-specific adenine glycosylase 896 60.37 0 958456..959313 - 285 121603815 - Pnap_0906 - hypothetical protein 897 63.64 0 959468..961117 - 549 121603816 - Pnap_0907 - DNA repair protein RecN 898 63.36 0 961152..962027 - 291 121603817 ppnK Pnap_0908 - inorganic polyphosphate/ATP-NAD kinase 899 59.66 0 962077..963090 + 337 121603818 hrcA Pnap_0909 - heat-inducible transcription repressor 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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