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Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 569 63.37 0 612254..613768 + 504 121603488 - Pnap_0576 - hypothetical protein 570 64.28 0 613798..614886 + 362 121603489 - Pnap_0577 - nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 571 63.66 0 614962..615825 + 287 121603490 - Pnap_0578 - binding-protein-dependent transport systems inner membrane component 572 65.69 0 615843..616661 + 272 121603491 - Pnap_0579 - binding-protein-dependent transport systems inner membrane component 573 65.41 0 616721..617518 + 265 121603492 - Pnap_0580 - ABC transporter related 574 66.40 0 617587..618333 + 248 121603493 - Pnap_0581 - hypothetical protein 575 68.61 +1 618504..619172 - 222 121603494 - Pnap_0582 - TPR repeat-containing protein 576 66.92 0 619169..619570 - 133 121603495 - Pnap_0583 - cytochrome C biogenesis protein 577 62.69 0 619563..620090 - 175 121603496 - Pnap_0584 - periplasmic protein thiol--disulphide oxidoreductase DsbE 578 67.97 0 620099..622096 - 665 121603497 - Pnap_0585 - cytochrome c-type biogenesis protein CcmF 579 66.44 0 622093..622542 - 149 121603498 - Pnap_0586 - CcmE/CycJ protein 580 67.30 0 622718..623506 - 262 121603499 - Pnap_0587 - heme exporter protein CcmC 581 68.91 +1 623530..624198 - 222 121603500 - Pnap_0588 - heme exporter protein CcmB 582 72.25 +1 624192..624836 - 214 121603501 - Pnap_0589 - heme exporter protein CcmA 583 67.17 0 624830..625630 - 266 121603502 - Pnap_0590 - cytochrome B561 584 63.87 0 625646..626110 - 154 121603503 - Pnap_0591 - hypothetical protein 585 60.11 0 626748..627113 - 121 121603504 - Pnap_0593 - transposase, IS4 family protein 586 61.65 0 627285..628640 - 451 121603505 - Pnap_0594 - putative transposase 587 50.62 -2 628997..629239 + 80 121603506 - Pnap_0595 - phage tail collar domain-containing protein 588 52.48 -1 629270..629572 - 100 121603507 - Pnap_0596 - hypothetical protein 589 57.27 -1 629705..630034 + 109 121603508 - Pnap_0597 - hypothetical protein 590 58.48 0 630162..631676 + 504 121603509 - Pnap_0598 - FAD linked oxidase domain-containing protein 591 64.42 0 631708..632685 - 325 121603510 - Pnap_0599 - hypothetical protein 592 64.48 0 632717..633355 - 212 121603511 - Pnap_0600 - dimethylmenaquinone methyltransferase 593 65.63 0 633394..634260 - 288 121603512 - Pnap_0601 - 6-phosphogluconate dehydrogenase, NAD-binding 594 63.50 0 634463..635125 + 220 121603513 - Pnap_0602 - GntR family transcriptional regulator 595 65.60 0 635157..635624 - 155 121603514 - Pnap_0603 - MarR family transcriptional regulator 596 69.19 +1 635771..636760 - 329 121603515 - Pnap_0604 - hypothetical protein 597 69.09 +1 637033..637815 - 260 121603516 - Pnap_0605 - enoyl-CoA hydratase 598 61.99 0 637966..638841 + 291 121603517 - Pnap_0606 - amidohydrolase 2 599 65.81 0 638908..639954 - 348 121603518 - Pnap_0607 - helix-turn-helix domain-containing protein 600 62.13 0 640253..641245 + 330 121603519 - Pnap_0608 - hypothetical protein 601 64.05 0 641306..642568 + 420 121603520 - Pnap_0609 - major facilitator superfamily transporter 602 65.63 0 642669..644111 + 480 121603521 - Pnap_0610 - aldehyde dehydrogenase 603 60.72 0 644191..645636 + 481 121603522 - Pnap_0611 - carotenoid oxygenase 604 60.76 0 645800..647002 - 400 121603523 - Pnap_0612 - branched-chain amino acid ABC transporter periplasmic substrate-binding protein 605 56.55 -1 647219..648454 - 411 121603524 - Pnap_0613 - IS605 family transposase OrfB 606 62.55 0 648849..649673 + 274 121603525 - Pnap_0614 - glyoxalase/bleomycin resistance protein/dioxygenase 607 66.41 0 649701..650486 + 261 121603526 - Pnap_0615 - helix-turn-helix, type 11 domain-containing protein 608 64.54 0 650483..652225 + 580 121603527 - Pnap_0616 - 3-(3-hydroxyphenyl)propionate hydroxylase 609 63.45 0 652245..653270 + 341 121603528 - Pnap_0617 - hypothetical protein 610 63.96 0 653369..654217 + 282 121603529 - Pnap_0618 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 611 66.18 0 654289..656124 - 611 121603530 - Pnap_0619 - putative flavoprotein involved in K+ transport 612 71.87 +1 656373..658334 - 653 121603531 - Pnap_0620 - Fis family GAF modulated sigma54 specific transcriptional regulator 613 63.12 0 658482..658904 - 140 121603532 - Pnap_0621 - HxlR family transcriptional regulator 614 67.95 0 658994..659848 + 284 121603533 - Pnap_0622 - NmrA family protein 615 62.86 0 660162..660608 + 148 121603534 - Pnap_0623 - DNA/RNA endonuclease G NUC1-like protein 616 49.31 -2 660757..661482 + 241 121603535 - Pnap_0624 - deoxyribonuclease I 617 50.99 -2 661587..662594 - 335 121603536 - Pnap_0625 - hypothetical protein 618 35.06 -2 662650..663111 - 153 121603537 - Pnap_0626 - hypothetical protein 619 57.18 -1 663151..663846 - 231 121603538 - Pnap_0627 - hypothetical protein 620 55.32 -1 663843..667040 - 1065 121603539 - Pnap_0628 - phage integrase family protein 621 58.28 0 667037..668359 - 440 121603540 - Pnap_0629 - phage integrase family protein 622 63.16 0 668680..669192 + 170 121603541 - Pnap_0630 - DNA/RNA non-specific endonuclease 623 60.24 0 669209..669457 + 82 121603542 - Pnap_0631 - hypothetical protein 624 68.33 +1 669441..670280 - 279 121603543 - Pnap_0632 - hypothetical protein 625 68.94 +1 670342..672060 - 572 121603544 - Pnap_0633 - sodium/hydrogen exchanger 626 69.74 +1 672039..673535 - 498 121603545 - Pnap_0634 - hypothetical protein 627 61.90 0 673732..673983 + 83 121603546 - Pnap_0635 - transglycosylase-associated protein 628 65.29 0 674080..674805 + 241 121603547 - Pnap_0636 - exsB protein 629 68.28 +1 674809..676419 - 536 121603548 - Pnap_0637 - protein of unknown function DUF894, DitE 630 63.72 0 676432..678264 - 610 121603549 - Pnap_0638 - ABC transporter 631 66.06 0 678287..679267 - 326 121603550 - Pnap_0639 - 5-nucleotidase 632 66.85 0 679304..679858 - 184 121603551 - Pnap_0640 - phosphoglycerate mutase 633 66.79 0 679863..680699 - 278 121603552 - Pnap_0641 - cobalamin-5-phosphate synthase CobS 634 68.47 +1 680708..681760 - 350 121603553 - Pnap_0642 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 635 64.23 0 681723..681968 - 81 121603554 - Pnap_0643 - hypothetical protein 636 63.94 0 681977..683626 - 549 121603555 - Pnap_0644 - threonine dehydratase 637 63.62 0 683953..684411 + 152 121603556 - Pnap_0645 - OsmC family protein 638 65.87 0 684425..685054 - 209 121603557 - Pnap_0646 - putative ubiquinone biosynthesis protein 639 59.18 0 685250..686545 - 431 121603558 - Pnap_0647 - outer membrane protein (porin)-like protein 640 43.79 -2 686561..686914 + 117 121603559 - Pnap_0648 - hypothetical protein 641 54.69 -1 687116..688150 + 344 121603560 - Pnap_0649 - porin 642 55.68 -1 688495..689604 + 369 121603561 - Pnap_0650 - porin 643 62.95 0 689844..691187 + 447 121603562 - Pnap_0651 - amidohydrolase 644 63.83 0 691329..692174 - 281 121603563 - Pnap_0652 - RpiR family transcriptional regulator 645 63.89 0 692176..693687 - 503 121603564 - Pnap_0653 - glucose-6-phosphate 1-dehydrogenase 646 62.13 0 693791..694738 + 315 121603565 - Pnap_0654 - transaldolase B 647 63.41 0 694761..696326 + 521 121603566 - Pnap_0655 - glucose-6-phosphate isomerase 648 60.30 0 696423..696752 + 109 121603567 - Pnap_0656 - hypothetical protein 649 60.79 0 696891..698540 - 549 121603568 groEL Pnap_0657 - chaperonin GroEL 650 54.64 -1 698644..698934 - 96 121603569 - Pnap_0658 - chaperonin Cpn10 651 63.32 0 699292..699978 + 228 121603570 - Pnap_0659 - hypothetical protein 652 63.05 0 700053..701240 - 395 121603571 - Pnap_0660 - S-adenosylmethionine synthetase 653 67.73 0 701410..702258 + 282 121603572 - Pnap_0661 - lipid A biosynthesis acyltransferase 654 65.66 0 702255..703151 + 298 121603573 - Pnap_0662 - lipid A biosynthesis acyltransferase 655 62.95 0 703264..704043 - 259 121603574 - Pnap_0663 - GTP-binding protein, HSR1-related 656 61.95 0 704244..704921 + 225 121603575 - Pnap_0664 - cytochrome c, class I 657 61.96 0 705119..707347 + 742 121603576 - Pnap_0665 - ResB family protein 658 62.00 0 707344..708735 + 463 121603577 - Pnap_0666 - cytochrome c assembly protein 659 61.16 0 708811..709809 + 332 121603578 - Pnap_0667 - putative sulfite oxidase subunit YedY 660 61.06 0 709809..710468 + 219 121603579 - Pnap_0668 - ferric reductase domain-containing protein 661 62.00 0 710569..711855 - 428 121603580 - Pnap_0669 - diaminopimelate decarboxylase 662 53.56 -1 712198..712548 + 116 121603581 - Pnap_0670 - frataxin family protein 663 57.40 -1 712620..715037 - 805 121603582 - Pnap_0671 - 1A family penicillin-binding protein 664 52.59 -1 715297..716376 + 359 121603583 - Pnap_0672 - type IV pilus assembly protein PilM 665 50.61 -2 716487..716978 + 163 121603584 - Pnap_0673 - fimbrial assembly family protein 666 51.41 -2 717000..717674 + 224 121603585 - Pnap_0674 - pilus assembly protein, PilO 667 55.80 -1 717671..718222 + 183 121603586 - Pnap_0675 - pilus assembly protein, PilQ 668 55.21 -1 718219..720357 + 712 121603587 - Pnap_0676 - type IV pilus secretin PilQ 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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