version 1.0
Polaromonas naphthalenivorans CJ2, complete genome - 1..4410291 4084 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 510 60.74 0 544596..545540 - 314 121603429 - Pnap_0516 - PP-loop domain-containing protein 511 59.60 0 545546..545998 - 150 121603430 - Pnap_0517 - dihydroneopterin aldolase 512 68.10 0 545995..546762 - 255 121603431 - Pnap_0518 - short-chain dehydrogenase/reductase SDR 513 65.85 0 546835..547941 + 368 121603432 - Pnap_0519 - hypothetical protein 514 59.50 0 548057..548335 + 92 121603433 - Pnap_0520 - hypothetical protein 515 64.93 0 548332..549600 + 422 121603434 - Pnap_0521 - HipA domain-containing protein 516 56.41 -1 549611..549805 + 64 121603435 - Pnap_0522 - hypothetical protein 517 60.46 0 549995..551251 + 418 121603436 - Pnap_0523 - extracellular solute-binding protein 518 65.44 0 551295..552680 - 461 121603437 - Pnap_0524 - alpha,alpha-trehalose-phosphate synthase (UDP-forming) 519 65.51 0 552677..554497 - 606 121603438 - Pnap_0525 - glycoside hydrolase 15-related 520 69.10 +1 554494..555273 - 259 121603439 - Pnap_0526 - HAD family hydrolase 521 67.92 0 555398..557479 - 693 121603440 - Pnap_0527 - lytic transglycosylase, catalytic 522 64.32 0 557489..558127 + 212 121603441 - Pnap_0528 - 5-formyltetrahydrofolate cyclo-ligase 523 66.67 0 558214..559257 - 347 121603442 - Pnap_0529 - LysR family transcriptional regulator 524 71.43 +1 559331..559792 + 153 121603443 - Pnap_0530 - hypothetical protein 525 64.44 0 559817..560221 - 134 121603444 - Pnap_0531 - BLUF domain-containing protein 526 64.26 0 560234..561064 + 276 121603445 - Pnap_0532 - cyclic nucleotide-binding protein 527 68.64 +1 561187..562608 + 473 121603446 - Pnap_0533 - UDP-N-acetylglucosamine pyrophosphorylase 528 61.90 0 563289..563771 - 160 121603447 - Pnap_0535 - AsnC family transcriptional regulator 529 66.72 0 563910..565766 + 618 121603448 - Pnap_0536 - D-fructose-6-phosphate amidotransferase 530 61.17 0 565874..566455 - 193 121603449 - Pnap_0537 - transposase, IS4 family protein 531 61.84 0 566895..567371 + 158 121603450 - Pnap_0538 - rhodanese domain-containing protein 532 65.91 0 567423..568349 + 308 121603451 - Pnap_0539 - Serine O-acetyltransferase 533 61.17 0 568346..568618 + 90 121603452 - Pnap_0540 - helix-turn-helix domain-containing protein 534 61.73 0 568766..570121 - 451 121603453 - Pnap_0541 - putative transposase 535 61.11 0 570177..571058 + 293 121603454 - Pnap_0542 - hypothetical protein 536 67.30 0 571073..573112 + 679 121603455 - Pnap_0543 - SufS subfamily cysteine desulfurase 537 65.07 0 573413..574417 + 334 121603456 - Pnap_0544 - aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 538 68.49 +1 574425..575354 + 309 121603457 - Pnap_0545 - binding-protein-dependent transport systems inner membrane component 539 66.67 0 575351..576088 + 245 121603458 - Pnap_0546 - ABC transporter related 540 61.71 0 576594..577703 + 369 121603459 - Pnap_0547 - luciferase family protein 541 69.31 +1 577720..578931 + 403 121603460 - Pnap_0548 - long-chain-fatty-acid--CoA ligase-related protein 542 64.04 0 578946..579743 + 265 121603461 - Pnap_0549 - ABC transporter related 543 66.89 0 579765..580646 + 293 121603462 - Pnap_0550 - inner-membrane translocator 544 63.58 0 580659..581726 + 355 121603463 - Pnap_0551 - inner-membrane translocator 545 62.90 0 581780..583105 + 441 121603464 - Pnap_0552 - hypothetical protein 546 66.18 0 583193..584434 + 413 121603465 - Pnap_0553 - acyl-CoA dehydrogenase type 2 547 65.47 0 584498..585751 + 417 121603466 - Pnap_0554 - acyl-CoA dehydrogenase type 2 548 65.35 0 586010..586771 + 253 121603467 - Pnap_0555 - ABC transporter related 549 65.13 0 586812..587915 - 367 121603468 - Pnap_0556 - response regulator receiver protein 550 66.84 0 587932..589119 - 395 121603469 - Pnap_0557 - acyl-CoA dehydrogenase type 2 551 66.67 0 589201..589761 - 186 121603470 - Pnap_0558 - FMN reductase 552 54.79 -1 589793..590053 + 86 121603471 - Pnap_0559 - hypothetical protein 553 67.98 0 590500..591714 + 404 121603472 - Pnap_0560 - alkanesulfonate monooxygenase 554 66.43 0 591711..592562 + 283 121603473 - Pnap_0561 - amidohydrolase 2 555 63.84 0 592589..593578 + 329 121603474 - Pnap_0562 - cysteine synthase A 556 59.94 0 593702..594727 + 341 121603475 - Pnap_0563 - sulfate ABC transporter, periplasmic sulfate-binding protein 557 65.31 0 594770..595945 + 391 121603476 - Pnap_0564 - sigma-54 dependent trancsriptional regulator 558 69.42 +1 596039..598219 + 726 121603477 - Pnap_0565 - thiol:disulfide interchange protein, putative 559 71.58 +1 598299..599864 - 521 121603478 - Pnap_0566 - RND efflux system outer membrane lipoprotein 560 69.57 +1 599861..601135 - 424 121603479 - Pnap_0567 - RND family efflux transporter MFP subunit 561 65.98 0 601160..604357 - 1065 121603480 - Pnap_0568 - acriflavin resistance protein 562 63.73 0 604587..605063 - 158 121603481 - Pnap_0569 - cytochrome c, class II 563 67.36 0 605150..606154 - 334 121603482 - Pnap_0570 - SMP-30/gluconolaconase/LRE domain-containing protein 564 63.55 0 606183..606791 - 202 121603483 - Pnap_0571 - redoxin domain-containing protein 565 66.08 0 606823..607506 - 227 121603484 - Pnap_0572 - cytochrome c, class I 566 59.18 0 607522..607935 - 137 121603485 - Pnap_0573 - hypothetical protein 567 65.70 0 607966..609417 - 483 121603486 - Pnap_0574 - hypothetical protein 568 63.64 0 609455..611803 - 782 121603487 - Pnap_0575 - hypothetical protein 569 63.37 0 612254..613768 + 504 121603488 - Pnap_0576 - hypothetical protein 570 64.28 0 613798..614886 + 362 121603489 - Pnap_0577 - nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 571 63.66 0 614962..615825 + 287 121603490 - Pnap_0578 - binding-protein-dependent transport systems inner membrane component 572 65.69 0 615843..616661 + 272 121603491 - Pnap_0579 - binding-protein-dependent transport systems inner membrane component 573 65.41 0 616721..617518 + 265 121603492 - Pnap_0580 - ABC transporter related 574 66.40 0 617587..618333 + 248 121603493 - Pnap_0581 - hypothetical protein 575 68.61 +1 618504..619172 - 222 121603494 - Pnap_0582 - TPR repeat-containing protein 576 66.92 0 619169..619570 - 133 121603495 - Pnap_0583 - cytochrome C biogenesis protein 577 62.69 0 619563..620090 - 175 121603496 - Pnap_0584 - periplasmic protein thiol--disulphide oxidoreductase DsbE 578 67.97 0 620099..622096 - 665 121603497 - Pnap_0585 - cytochrome c-type biogenesis protein CcmF 579 66.44 0 622093..622542 - 149 121603498 - Pnap_0586 - CcmE/CycJ protein 580 67.30 0 622718..623506 - 262 121603499 - Pnap_0587 - heme exporter protein CcmC 581 68.91 +1 623530..624198 - 222 121603500 - Pnap_0588 - heme exporter protein CcmB 582 72.25 +1 624192..624836 - 214 121603501 - Pnap_0589 - heme exporter protein CcmA 583 67.17 0 624830..625630 - 266 121603502 - Pnap_0590 - cytochrome B561 584 63.87 0 625646..626110 - 154 121603503 - Pnap_0591 - hypothetical protein 585 60.11 0 626748..627113 - 121 121603504 - Pnap_0593 - transposase, IS4 family protein 586 61.65 0 627285..628640 - 451 121603505 - Pnap_0594 - putative transposase 587 50.62 -2 628997..629239 + 80 121603506 - Pnap_0595 - phage tail collar domain-containing protein 588 52.48 -1 629270..629572 - 100 121603507 - Pnap_0596 - hypothetical protein 589 57.27 -1 629705..630034 + 109 121603508 - Pnap_0597 - hypothetical protein 590 58.48 0 630162..631676 + 504 121603509 - Pnap_0598 - FAD linked oxidase domain-containing protein 591 64.42 0 631708..632685 - 325 121603510 - Pnap_0599 - hypothetical protein 592 64.48 0 632717..633355 - 212 121603511 - Pnap_0600 - dimethylmenaquinone methyltransferase 593 65.63 0 633394..634260 - 288 121603512 - Pnap_0601 - 6-phosphogluconate dehydrogenase, NAD-binding 594 63.50 0 634463..635125 + 220 121603513 - Pnap_0602 - GntR family transcriptional regulator 595 65.60 0 635157..635624 - 155 121603514 - Pnap_0603 - MarR family transcriptional regulator 596 69.19 +1 635771..636760 - 329 121603515 - Pnap_0604 - hypothetical protein 597 69.09 +1 637033..637815 - 260 121603516 - Pnap_0605 - enoyl-CoA hydratase 598 61.99 0 637966..638841 + 291 121603517 - Pnap_0606 - amidohydrolase 2 599 65.81 0 638908..639954 - 348 121603518 - Pnap_0607 - helix-turn-helix domain-containing protein 600 62.13 0 640253..641245 + 330 121603519 - Pnap_0608 - hypothetical protein 601 64.05 0 641306..642568 + 420 121603520 - Pnap_0609 - major facilitator superfamily transporter 602 65.63 0 642669..644111 + 480 121603521 - Pnap_0610 - aldehyde dehydrogenase 603 60.72 0 644191..645636 + 481 121603522 - Pnap_0611 - carotenoid oxygenase 604 60.76 0 645800..647002 - 400 121603523 - Pnap_0612 - branched-chain amino acid ABC transporter periplasmic substrate-binding protein 605 56.55 -1 647219..648454 - 411 121603524 - Pnap_0613 - IS605 family transposase OrfB 606 62.55 0 648849..649673 + 274 121603525 - Pnap_0614 - glyoxalase/bleomycin resistance protein/dioxygenase 607 66.41 0 649701..650486 + 261 121603526 - Pnap_0615 - helix-turn-helix, type 11 domain-containing protein 608 64.54 0 650483..652225 + 580 121603527 - Pnap_0616 - 3-(3-hydroxyphenyl)propionate hydroxylase 609 63.45 0 652245..653270 + 341 121603528 - Pnap_0617 - hypothetical protein 62.80 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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